RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Trim55G3X8Y1 545 aa18.04■□□□□ 0.48
Shh-201ENSMUST00000002708 Zfp408H7BX78 710 aa18.04■□□□□ 0.48
Shh-201ENSMUST00000002708 Large2Q5XPT3 690 aa18.04■□□□□ 0.48
Shh-201ENSMUST00000002708 Tsg101Q61187 391 aa18.04■□□□□ 0.48
Shh-201ENSMUST00000002708 Lrrcc1Q69ZB0 1026 aa18.04■□□□□ 0.48
Shh-201ENSMUST00000002708 WdpcpQ8C456 722 aa18.04■□□□□ 0.48
Shh-201ENSMUST00000002708 Myoz2Q9JJW5 264 aa18.04■□□□□ 0.48
Shh-201ENSMUST00000002708 Samd15F6XZJ7 620 aa18.03■□□□□ 0.48
Shh-201ENSMUST00000002708 PccaQ91ZA3 724 aa18.03■□□□□ 0.48
Shh-201ENSMUST00000002708 Alg1Q921Q3 482 aa18.03■□□□□ 0.48
Shh-201ENSMUST00000002708 Ppp1r3aQ99MR9 1089 aa18.03■□□□□ 0.48
Shh-201ENSMUST00000002708 Six6os1Q9CTN5 574 aa18.03■□□□□ 0.48
Shh-201ENSMUST00000002708 Dydc1Q9D9T0 175 aa18.03■□□□□ 0.48
Shh-201ENSMUST00000002708 Nr1d1Q3UV55 615 aa18.03■□□□□ 0.48
Shh-201ENSMUST00000002708 March6Q6ZQ89 909 aa18.03■□□□□ 0.48
Shh-201ENSMUST00000002708 Zbed4Q80WQ9 1168 aa18.03■□□□□ 0.48
Shh-201ENSMUST00000002708 Bbs7Q8K2G4 715 aa18.03■□□□□ 0.48
Shh-201ENSMUST00000002708 Vps37cQ8R105 352 aa18.03■□□□□ 0.48
Shh-201ENSMUST00000002708 Kbtbd4Q8R179 534 aa18.03■□□□□ 0.48
Shh-201ENSMUST00000002708 Rnf34Q99KR6 376 aa18.03■□□□□ 0.48
Shh-201ENSMUST00000002708 Ndufab1Q9CR21 156 aa18.03■□□□□ 0.48
Shh-201ENSMUST00000002708 Nol7Q9D7Z3 254 aaKnown RBP18.03■□□□□ 0.48
Shh-201ENSMUST00000002708 Capn9Q9D805 690 aa18.03■□□□□ 0.48
Shh-201ENSMUST00000002708 CoasyQ9DBL7 563 aa18.03■□□□□ 0.48
Shh-201ENSMUST00000002708 Irx5Q9JKQ4 484 aa18.03■□□□□ 0.48
Shh-201ENSMUST00000002708 Btbd18A0A0A6YY25 723 aa18.02■□□□□ 0.48
Shh-201ENSMUST00000002708 Gm4985A2ALC6 410 aa18.02■□□□□ 0.48
Shh-201ENSMUST00000002708 Zrsr2Q62377 462 aaKnown RBP18.02■□□□□ 0.48
Shh-201ENSMUST00000002708 SugctQ7TNE1 436 aa18.02■□□□□ 0.48
Shh-201ENSMUST00000002708 Traf3ip3Q8C0G2 513 aa18.02■□□□□ 0.48
Shh-201ENSMUST00000002708 Q8C6G1 249 aa18.02■□□□□ 0.48
Shh-201ENSMUST00000002708 Msantd4Q91YU3 345 aa18.02■□□□□ 0.48
Shh-201ENSMUST00000002708 RnmtQ9D0L8 465 aaKnown RBP18.02■□□□□ 0.48
Shh-201ENSMUST00000002708 Tnip1Q9WUU8 647 aa18.02■□□□□ 0.48
Shh-201ENSMUST00000002708 Proca1B0QZF7 307 aa18.02■□□□□ 0.47
Shh-201ENSMUST00000002708 Ifi207E9Q3L4 978 aa18.02■□□□□ 0.47
Shh-201ENSMUST00000002708 Sept2P42208 361 aaKnown RBP18.02■□□□□ 0.47
Shh-201ENSMUST00000002708 Tmc4Q7TQ65 694 aa18.02■□□□□ 0.47
Shh-201ENSMUST00000002708 Psmd2Q8VDM4 908 aa18.02■□□□□ 0.47
Shh-201ENSMUST00000002708 PdhbQ9D051 359 aa18.02■□□□□ 0.47
Shh-201ENSMUST00000002708 Spata17Q9D552 379 aa18.02■□□□□ 0.47
Shh-201ENSMUST00000002708 Rexo2Q9D8S4 237 aa18.02■□□□□ 0.47
Shh-201ENSMUST00000002708 Scgb2b12S4R2L0 112 aa18.02■□□□□ 0.47
Shh-201ENSMUST00000002708 Fam198bQ3UPI1 517 aa18.01■□□□□ 0.47
Shh-201ENSMUST00000002708 Lrrc36Q3V0M2 755 aa18.01■□□□□ 0.47
Shh-201ENSMUST00000002708 Arhgap44Q5SSM3 814 aa18.01■□□□□ 0.47
Shh-201ENSMUST00000002708 Herc4Q6PAV2 1057 aa18.01■□□□□ 0.47
Shh-201ENSMUST00000002708 FignQ9ERZ6 759 aa18.01■□□□□ 0.47
Shh-201ENSMUST00000002708 Slc26a4Q9R155 780 aa18.01■□□□□ 0.47
Shh-201ENSMUST00000002708 Flvcr1B2RXV4 560 aa18.01■□□□□ 0.47
Shh-201ENSMUST00000002708 XlrP05531 208 aa18.01■□□□□ 0.47
Shh-201ENSMUST00000002708 Ap1m1P35585 423 aa18.01■□□□□ 0.47
Shh-201ENSMUST00000002708 Jdp2P97875 163 aa18.01■□□□□ 0.47
Shh-201ENSMUST00000002708 Spout1Q3UHX9 385 aaKnown RBP18.01■□□□□ 0.47
Shh-201ENSMUST00000002708 Pls1Q3V0K9 630 aa18.01■□□□□ 0.47
Shh-201ENSMUST00000002708 Pla2g4eQ50L42 875 aa18.01■□□□□ 0.47
Shh-201ENSMUST00000002708 Meis1Q60954 390 aa18.01■□□□□ 0.47
Shh-201ENSMUST00000002708 Fnbp1Q80TY0 616 aa18.01■□□□□ 0.47
Shh-201ENSMUST00000002708 Slc51bQ80WK2 128 aa18.01■□□□□ 0.47
Shh-201ENSMUST00000002708 WaslQ91YD9 501 aa18.01■□□□□ 0.47
Shh-201ENSMUST00000002708 Arfgap2Q99K28 520 aa18.01■□□□□ 0.47
Shh-201ENSMUST00000002708 Smtnl1Q99LM3 459 aa18.01■□□□□ 0.47
Shh-201ENSMUST00000002708 Josd2Q9CR30 188 aa18.01■□□□□ 0.47
Shh-201ENSMUST00000002708 Angptl3Q9R182 455 aa18.01■□□□□ 0.47
Shh-201ENSMUST00000002708 Dnaaf5B9EJR8 853 aa18■□□□□ 0.47
Shh-201ENSMUST00000002708 Rnaseh1O70338 285 aa18■□□□□ 0.47
Shh-201ENSMUST00000002708 Nsun7Q14AW5 724 aa18■□□□□ 0.47
Shh-201ENSMUST00000002708 Tcerg1lQ3B807 590 aa18■□□□□ 0.47
Shh-201ENSMUST00000002708 Tmprss11aQ3UQ41 389 aa18■□□□□ 0.47
Shh-201ENSMUST00000002708 GanQ8CA72 597 aa18■□□□□ 0.47
Shh-201ENSMUST00000002708 Tsnaxip1Q99P25 704 aa18■□□□□ 0.47
Shh-201ENSMUST00000002708 LrmdaQ9D9B4 229 aa18■□□□□ 0.47
Shh-201ENSMUST00000002708 Mxra8Q9DBV4 442 aa18■□□□□ 0.47
Shh-201ENSMUST00000002708 Tex21Q9R0U9 575 aa18■□□□□ 0.47
Shh-201ENSMUST00000002708 Adgrf5G5E8Q8 1348 aa18■□□□□ 0.47
Shh-201ENSMUST00000002708 Orc4O88708 433 aa18■□□□□ 0.47
Shh-201ENSMUST00000002708 Psmc2P46471 433 aa18■□□□□ 0.47
Shh-201ENSMUST00000002708 Tmod1P49813 359 aa18■□□□□ 0.47
Shh-201ENSMUST00000002708 Brip1Q5SXJ3 1174 aa18■□□□□ 0.47
Shh-201ENSMUST00000002708 Rasa3Q60790 834 aa18■□□□□ 0.47
Shh-201ENSMUST00000002708 GartQ64737 1010 aa18■□□□□ 0.47
Shh-201ENSMUST00000002708 Dhx37Q6NZL1 1150 aa18■□□□□ 0.47
Shh-201ENSMUST00000002708 Lrrc4cQ8C031 640 aa18■□□□□ 0.47
Shh-201ENSMUST00000002708 Klhl20Q8VCK5 604 aa18■□□□□ 0.47
Shh-201ENSMUST00000002708 Tesk2Q8VCT9 570 aa18■□□□□ 0.47
Shh-201ENSMUST00000002708 Dhx58Q99J87 678 aa18■□□□□ 0.47
Shh-201ENSMUST00000002708 Abcf2Q99LE6 628 aaKnown RBP18■□□□□ 0.47
Shh-201ENSMUST00000002708 Mybl2P48972 704 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 Gjb6P70689 261 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 Meis2P97367 477 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 Rhbdf1Q6PIX5 856 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 Q8BWG4 1187 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 Oxnad1Q8VE38 311 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 Bhmt2Q91WS4 363 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 Slc5a5Q99PN0 618 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 Tjap1Q9DCD5 539 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 Nrxn2E9Q7X7 1710 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 Psmc6P62334 389 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 Hdgfl1Q2VPR5 283 aa17.99■□□□□ 0.47
Shh-201ENSMUST00000002708 Vmn1r209Q5NC97 312 aa17.99■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms