RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C SAR1P20606 190 aaKnown RBP5.78□□□□□ -1.48
VPS4YPR173C RSC6P25632 483 aa5.78□□□□□ -1.48
VPS4YPR173C YCR099CP25657 155 aa5.78□□□□□ -1.48
VPS4YPR173C MF(ALPHA)2P32435 120 aa5.78□□□□□ -1.48
VPS4YPR173C KSP1P38691 1029 aaKnown RBP5.78□□□□□ -1.48
VPS4YPR173C ARP1P38696 384 aa5.78□□□□□ -1.48
VPS4YPR173C EFM1P38732 585 aa5.78□□□□□ -1.48
VPS4YPR173C ALD5P40047 520 aaKnown RBP5.78□□□□□ -1.48
VPS4YPR173C PEA2P40091 420 aa5.78□□□□□ -1.48
VPS4YPR173C SOK1P40317 901 aa5.78□□□□□ -1.48
VPS4YPR173C IST3P40565 148 aaPredicted RBP5.78□□□□□ -1.48
VPS4YPR173C ALR2P43553 858 aa5.78□□□□□ -1.48
VPS4YPR173C SCS3P53012 380 aa5.78□□□□□ -1.48
VPS4YPR173C STR3P53101 465 aaKnown RBP5.78□□□□□ -1.48
VPS4YPR173C SHY1P53266 389 aa5.78□□□□□ -1.48
VPS4YPR173C YGR168CP53293 376 aa5.78□□□□□ -1.48
VPS4YPR173C YNL018CP53976 612 aa5.78□□□□□ -1.48
VPS4YPR173C NUP49Q02199 472 aa5.78□□□□□ -1.48
VPS4YPR173C GRX5Q02784 150 aa5.78□□□□□ -1.48
VPS4YPR173C YMR010WQ03687 405 aa5.78□□□□□ -1.48
VPS4YPR173C YLR345WQ06137 509 aa5.78□□□□□ -1.48
VPS4YPR173C GRS2Q06817 618 aa5.78□□□□□ -1.48
VPS4YPR173C NBA1Q08229 501 aaKnown RBP5.78□□□□□ -1.48
VPS4YPR173C RAX1Q08760 435 aa5.78□□□□□ -1.48
VPS4YPR173C YDR215CQ12240 137 aa5.78□□□□□ -1.48
VPS4YPR173C YPR1Q12458 312 aa5.78□□□□□ -1.48
VPS4YPR173C PRC1P00729 532 aa5.77□□□□□ -1.49
VPS4YPR173C DAP2P18962 818 aa5.77□□□□□ -1.49
VPS4YPR173C PHO3P24031 467 aa5.77□□□□□ -1.49
VPS4YPR173C PPQ1P32945 549 aa5.77□□□□□ -1.49
VPS4YPR173C TKL2P33315 681 aa5.77□□□□□ -1.49
VPS4YPR173C MPT5P39016 859 aaKnown RBP RIP-Chip data5.77□□□□□ -1.49not detected
VPS4YPR173C VMA7P39111 118 aa5.77□□□□□ -1.49
VPS4YPR173C RPH1P39956 796 aa5.77□□□□□ -1.49
VPS4YPR173C MIT1P40002 666 aa5.77□□□□□ -1.49
VPS4YPR173C ISC1P40015 477 aaKnown RBP5.77□□□□□ -1.49
VPS4YPR173C YER034WP40022 185 aaKnown RBP5.77□□□□□ -1.49
VPS4YPR173C PCL6P40038 420 aa5.77□□□□□ -1.49
VPS4YPR173C COG3P40094 801 aa5.77□□□□□ -1.49
VPS4YPR173C RGI2P40188 164 aa5.77□□□□□ -1.49
VPS4YPR173C ARF3P40994 183 aaRIP-Chip data5.77□□□□□ -1.49not detected
VPS4YPR173C BUD13P46947 266 aaPredicted RBP5.77□□□□□ -1.49
VPS4YPR173C SSY5P47002 699 aa5.77□□□□□ -1.49
VPS4YPR173C YGR045CP53229 120 aa5.77□□□□□ -1.49
VPS4YPR173C TIM13P53299 105 aa5.77□□□□□ -1.49
VPS4YPR173C SPC98P53540 846 aa5.77□□□□□ -1.49
VPS4YPR173C REG1Q00816 1014 aa5.77□□□□□ -1.49
VPS4YPR173C STP1Q00947 519 aa5.77□□□□□ -1.49
VPS4YPR173C IRC15Q02733 499 aa5.77□□□□□ -1.49
VPS4YPR173C MAK3Q03503 176 aa5.77□□□□□ -1.49
VPS4YPR173C GSH2Q08220 491 aa5.77□□□□□ -1.49
VPS4YPR173C ICT1Q12385 394 aa5.77□□□□□ -1.49
VPS4YPR173C YDL199CQ12407 687 aa5.77□□□□□ -1.49
VPS4YPR173C RAS2P01120 322 aaKnown RBP5.76□□□□□ -1.49
VPS4YPR173C GAL80P04387 435 aa5.76□□□□□ -1.49
VPS4YPR173C CIT2P08679 460 aa5.76□□□□□ -1.49
VPS4YPR173C POX1P13711 748 aa5.76□□□□□ -1.49
VPS4YPR173C THI4P32318 326 aa5.76□□□□□ -1.49
VPS4YPR173C AAR2P32357 355 aaPredicted RBP5.76□□□□□ -1.49
VPS4YPR173C MKK2P32491 506 aa5.76□□□□□ -1.49
VPS4YPR173C IMP3P32899 183 aaPredicted RBP5.76□□□□□ -1.49
VPS4YPR173C NIC96P34077 839 aa5.76□□□□□ -1.49
VPS4YPR173C CTF13P35203 478 aa5.76□□□□□ -1.49
VPS4YPR173C NAT2P37293 288 aa5.76□□□□□ -1.49
VPS4YPR173C SEA4P38164 1038 aa5.76□□□□□ -1.49
VPS4YPR173C CCT6P39079 546 aa5.76□□□□□ -1.49
VPS4YPR173C MNN9P39107 395 aaKnown RBP5.76□□□□□ -1.49
VPS4YPR173C DHH1P39517 506 aaKnown RBP5.76□□□□□ -1.49
VPS4YPR173C SPO73P40031 143 aa5.76□□□□□ -1.49
VPS4YPR173C YGR210CP42942 411 aa5.76□□□□□ -1.49
VPS4YPR173C MNN5P46982 586 aa5.76□□□□□ -1.49
VPS4YPR173C YPT32P51996 222 aaKnown RBP5.76□□□□□ -1.49
VPS4YPR173C ELA1P53861 379 aaPredicted RBP5.76□□□□□ -1.49
VPS4YPR173C YNL181WP53878 407 aa5.76□□□□□ -1.49
VPS4YPR173C YNL134CP53912 376 aaKnown RBP5.76□□□□□ -1.49
VPS4YPR173C IDP3P53982 420 aaKnown RBP5.76□□□□□ -1.49
VPS4YPR173C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.76□□□□□ -1.49not detected
VPS4YPR173C DML1Q03652 475 aa5.76□□□□□ -1.49
VPS4YPR173C EMI1Q04406 187 aa5.76□□□□□ -1.49
VPS4YPR173C OPI10Q08202 246 aa5.76□□□□□ -1.49
VPS4YPR173C YOL131WQ08270 108 aa5.76□□□□□ -1.49
VPS4YPR173C MLH3Q12083 715 aa5.76□□□□□ -1.49
VPS4YPR173C YDR061WQ12298 539 aa5.76□□□□□ -1.49
VPS4YPR173C GTT2Q12390 233 aa5.76□□□□□ -1.49
VPS4YPR173C NSI1Q12457 570 aa5.76□□□□□ -1.49
VPS4YPR173C PDE2P06776 526 aa5.75□□□□□ -1.49
VPS4YPR173C ADE5,7P07244 802 aaKnown RBP5.75□□□□□ -1.49
VPS4YPR173C KIN2P13186 1147 aaKnown RBP5.75□□□□□ -1.49
VPS4YPR173C DBP3P20447 523 aaKnown RBP5.75□□□□□ -1.49
VPS4YPR173C RSA4P25382 515 aaKnown RBP5.75□□□□□ -1.49
VPS4YPR173C ATG22P25568 528 aa5.75□□□□□ -1.49
VPS4YPR173C ARO7P32178 256 aa5.75□□□□□ -1.49
VPS4YPR173C BAP2P38084 609 aa5.75□□□□□ -1.49
VPS4YPR173C MBA1P38300 278 aa5.75□□□□□ -1.49
VPS4YPR173C TSL1P38427 1098 aaKnown RBP5.75□□□□□ -1.49
VPS4YPR173C RCK1P38622 512 aa5.75□□□□□ -1.49
VPS4YPR173C HSE1P38753 452 aa5.75□□□□□ -1.49
VPS4YPR173C SKN7P38889 622 aa5.75□□□□□ -1.49
VPS4YPR173C PNT1P38969 423 aa5.75□□□□□ -1.49
VPS4YPR173C DUN1P39009 513 aa5.75□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms