RNA–Protein interactions for RNA: YPR010C

RPA135, Transcript of RNA polymerase I second largest subunit A135, yeastyeast

Gene RPA135, Length 3,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA135YPR010C AAT1Q01802 451 aa3.25□□□□□ -1.89
RPA135YPR010C NDL1Q06568 189 aa3.25□□□□□ -1.89
RPA135YPR010C GIC2Q06648 383 aa3.25□□□□□ -1.89
RPA135YPR010C RPN8Q08723 338 aaKnown RBP3.25□□□□□ -1.89
RPA135YPR010C UAF30Q08747 228 aa3.25□□□□□ -1.89
RPA135YPR010C GPB1Q08886 897 aa3.25□□□□□ -1.89
RPA135YPR010C MHF2Q3E829 80 aa3.25□□□□□ -1.89
RPA135YPR010C RIF1P29539 1916 aa3.25□□□□□ -1.89
RPA135YPR010C BRR2P32639 2163 aaKnown RBP3.24□□□□□ -1.89
RPA135YPR010C CET1O13297 549 aaPredicted RBP3.24□□□□□ -1.89
RPA135YPR010C MF(ALPHA)1P01149 165 aa3.24□□□□□ -1.89
RPA135YPR010C RAD7P06779 565 aa3.24□□□□□ -1.89
RPA135YPR010C RPS4AP0CX35 261 aaKnown RBP3.24□□□□□ -1.89
RPA135YPR010C RPS4BP0CX36 261 aaKnown RBP3.24□□□□□ -1.89
RPA135YPR010C URA4P20051 364 aa3.24□□□□□ -1.89
RPA135YPR010C CMK2P22517 447 aa3.24□□□□□ -1.89
RPA135YPR010C ARE1P25628 610 aa3.24□□□□□ -1.89
RPA135YPR010C SBE22P38814 852 aa3.24□□□□□ -1.89
RPA135YPR010C GIM4P40005 111 aaKnown RBP3.24□□□□□ -1.89
RPA135YPR010C SWP82P43554 623 aa3.24□□□□□ -1.89
RPA135YPR010C EFM3P47163 339 aa3.24□□□□□ -1.89
RPA135YPR010C YGR035CP53222 116 aa3.24□□□□□ -1.89
RPA135YPR010C SHY1P53266 389 aa3.24□□□□□ -1.89
RPA135YPR010C TMA20P89886 181 aaPredicted RBP3.24□□□□□ -1.89
RPA135YPR010C SPC19Q03954 165 aa3.24□□□□□ -1.89
RPA135YPR010C TMN2Q04562 672 aa3.24□□□□□ -1.89
RPA135YPR010C SWF1Q04629 336 aa3.24□□□□□ -1.89
RPA135YPR010C HDA2Q06629 674 aa3.24□□□□□ -1.89
RPA135YPR010C GUP2Q08929 609 aa3.24□□□□□ -1.89
RPA135YPR010C YOL159C-AQ3E769 90 aa3.24□□□□□ -1.89
RPA135YPR010C CNA1P23287 553 aa3.24□□□□□ -1.89
RPA135YPR010C AAT2P23542 418 aaKnown RBP3.24□□□□□ -1.89
RPA135YPR010C RPL24BP24000 155 aaKnown RBP3.24□□□□□ -1.89
RPA135YPR010C GSH1P32477 678 aa3.24□□□□□ -1.89
RPA135YPR010C DOM34P33309 386 aa3.24□□□□□ -1.89
RPA135YPR010C NUF2P33895 451 aa3.24□□□□□ -1.89
RPA135YPR010C ALY1P36117 915 aa3.24□□□□□ -1.89
RPA135YPR010C IST2P38250 946 aa3.24□□□□□ -1.89
RPA135YPR010C YHR045WP38775 560 aa3.24□□□□□ -1.89
RPA135YPR010C COG3P40094 801 aa3.24□□□□□ -1.89
RPA135YPR010C GLG2P47011 380 aa3.24□□□□□ -1.89
RPA135YPR010C GRX5Q02784 150 aa3.24□□□□□ -1.89
RPA135YPR010C IRC10Q08118 586 aa3.24□□□□□ -1.89
RPA135YPR010C RSA1Q08932 381 aa3.24□□□□□ -1.89
RPA135YPR010C THP3Q12049 470 aaKnown RBP3.24□□□□□ -1.89
RPA135YPR010C PER33Q12144 273 aa3.24□□□□□ -1.89
RPA135YPR010C YOR114WQ12219 294 aa3.24□□□□□ -1.89
RPA135YPR010C YLL054CQ12244 843 aa3.24□□□□□ -1.89
RPA135YPR010C YPR064WQ12492 139 aa3.24□□□□□ -1.89
RPA135YPR010C PRP8P33334 2413 aaKnown RBP3.24□□□□□ -1.89
RPA135YPR010C RHO1P06780 209 aaKnown RBP3.24□□□□□ -1.89
RPA135YPR010C KEX2P13134 814 aa3.24□□□□□ -1.89
RPA135YPR010C PDX1P16451 410 aa3.24□□□□□ -1.89
RPA135YPR010C OLE1P21147 510 aaKnown RBP3.24□□□□□ -1.89
RPA135YPR010C DBR1P24309 405 aaKnown RBP3.24□□□□□ -1.89
RPA135YPR010C PBN1P25580 416 aa3.24□□□□□ -1.89
RPA135YPR010C PPZ1P26570 692 aa3.24□□□□□ -1.89
RPA135YPR010C HXT4P32467 576 aa3.24□□□□□ -1.89
RPA135YPR010C NAB2P32505 525 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
RPA135YPR010C MBP1P39678 833 aa3.24□□□□□ -1.89
RPA135YPR010C MET28P40573 187 aa3.24□□□□□ -1.89
RPA135YPR010C RPL10P41805 221 aaKnown RBP3.24□□□□□ -1.89
RPA135YPR010C PRM1P53835 661 aa3.24□□□□□ -1.89
RPA135YPR010C TPS1Q00764 495 aaKnown RBP3.24□□□□□ -1.89
RPA135YPR010C YPL107WQ02873 248 aa3.24□□□□□ -1.89
RPA135YPR010C MAK3Q03503 176 aa3.24□□□□□ -1.89
RPA135YPR010C PML39Q03760 334 aa3.24□□□□□ -1.89
RPA135YPR010C HMO1Q03973 246 aaKnown RBP3.24□□□□□ -1.89
RPA135YPR010C FLP1P03870 423 aa3.23□□□□□ -1.89
RPA135YPR010C YAR066WP0CX18 203 aa3.23□□□□□ -1.89
RPA135YPR010C YHR214WP0CX19 203 aa3.23□□□□□ -1.89
RPA135YPR010C FBA1P14540 359 aaKnown RBP3.23□□□□□ -1.89
RPA135YPR010C CBS2P14905 389 aa3.23□□□□□ -1.89
RPA135YPR010C CMK1P27466 446 aaKnown RBP3.23□□□□□ -1.89
RPA135YPR010C ASF2P32448 525 aaPredicted RBP3.23□□□□□ -1.89
RPA135YPR010C TIP20P33891 701 aa3.23□□□□□ -1.89
RPA135YPR010C TCD2P36101 447 aaKnown RBP3.23□□□□□ -1.89
RPA135YPR010C ZTA1P38230 334 aaKnown RBP3.23□□□□□ -1.89
RPA135YPR010C SOK1P40317 901 aa3.23□□□□□ -1.89
RPA135YPR010C MSS2P40990 351 aa3.23□□□□□ -1.89
RPA135YPR010C STE24P47154 453 aa3.23□□□□□ -1.89
RPA135YPR010C SUT1P53032 299 aaKnown RBP3.23□□□□□ -1.89
RPA135YPR010C NSE1Q07913 336 aa3.23□□□□□ -1.89
RPA135YPR010C LAA1P39526 2014 aa3.23□□□□□ -1.89
RPA135YPR010C PHO5P00635 467 aa3.23□□□□□ -1.89
RPA135YPR010C HTS1P07263 546 aaKnown RBP3.23□□□□□ -1.89
RPA135YPR010C MER1P16523 270 aa3.23□□□□□ -1.89
RPA135YPR010C BET2P20133 325 aa3.23□□□□□ -1.89
RPA135YPR010C ITR2P30606 609 aa3.23□□□□□ -1.89
RPA135YPR010C RNP1P32385 249 aa3.23□□□□□ -1.89
RPA135YPR010C YGL015CP33199 130 aa3.23□□□□□ -1.89
RPA135YPR010C SIC1P38634 284 aa3.23□□□□□ -1.89
RPA135YPR010C BIG1P38813 335 aa3.23□□□□□ -1.89
RPA135YPR010C YHR127WP38833 243 aaKnown RBP3.23□□□□□ -1.89
RPA135YPR010C YAR028WP39548 234 aa3.23□□□□□ -1.89
RPA135YPR010C ZIM17P42844 174 aa3.23□□□□□ -1.89
RPA135YPR010C ALR2P43553 858 aa3.23□□□□□ -1.89
RPA135YPR010C GYP8P43570 497 aa3.23□□□□□ -1.89
RPA135YPR010C BIO3P50277 480 aa3.23□□□□□ -1.89
RPA135YPR010C COS12P53053 380 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms