RNA–Protein interactions for RNA: YPL178W

CBC2, Transcript of Small subunit of the heterodimeric cap binding complex with Sto1p, yeast

Gene CBC2, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBC2	YPL178W	YDR215C	Q12240	137 aa		5.1	□□□□□ -1.59
CBC2	YPL178W	GLE1	Q12315	538 aa		5.1	□□□□□ -1.59
CBC2	YPL178W	TEL1	P38110	2787 aa		5.1	□□□□□ -1.59
CBC2	YPL178W	CBS2	P14905	389 aa		5.09	□□□□□ -1.59
CBC2	YPL178W	PRI2	P20457	528 aa		5.09	□□□□□ -1.59
CBC2	YPL178W	DIT1	P21623	536 aa		5.09	□□□□□ -1.59
CBC2	YPL178W	TAH1	P25638	111 aa	Predicted RBP	5.09	□□□□□ -1.59
CBC2	YPL178W	YJU2	P28320	278 aa	Predicted RBP	5.09	□□□□□ -1.59
CBC2	YPL178W	SUI1	P32911	108 aa	Known RBP	5.09	□□□□□ -1.59
CBC2	YPL178W	YKR078W	P36158	585 aa	Known RBP	5.09	□□□□□ -1.59
CBC2	YPL178W	GDT1	P38301	280 aa	Predicted RBP	5.09	□□□□□ -1.59
CBC2	YPL178W	FTH1	P38310	465 aa		5.09	□□□□□ -1.59
CBC2	YPL178W	RFC3	P38629	340 aa		5.09	□□□□□ -1.59
CBC2	YPL178W	ATG7	P38862	630 aa		5.09	□□□□□ -1.59
CBC2	YPL178W	PRP39	P39682	629 aa	Known RBP	5.09	□□□□□ -1.59
CBC2	YPL178W	MRX1	P40050	688 aa		5.09	□□□□□ -1.59
CBC2	YPL178W	RPL10	P41805	221 aa	Known RBP	5.09	□□□□□ -1.59
CBC2	YPL178W	SPG5	P42933	373 aa		5.09	□□□□□ -1.59
CBC2	YPL178W	PRM10	P42946	383 aa		5.09	□□□□□ -1.59
CBC2	YPL178W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	5.09	□□□□□ -1.59	not detected
CBC2	YPL178W	PMT3	P47190	753 aa		5.09	□□□□□ -1.59
CBC2	YPL178W	ROG1	P53118	685 aa		5.09	□□□□□ -1.59
CBC2	YPL178W	ARC35	P53731	342 aa	Known RBP	5.09	□□□□□ -1.59
CBC2	YPL178W	EFR3	Q03653	782 aa	Known RBP	5.09	□□□□□ -1.59
CBC2	YPL178W	TPP1	Q03796	238 aa		5.09	□□□□□ -1.59
CBC2	YPL178W	GLO2	Q05584	274 aa		5.09	□□□□□ -1.59
CBC2	YPL178W	YLR413W	Q06689	675 aa		5.09	□□□□□ -1.59
CBC2	YPL178W	TEN1	Q07921	160 aa		5.09	□□□□□ -1.59
CBC2	YPL178W	YOL159C	Q08300	171 aa		5.09	□□□□□ -1.59
CBC2	YPL178W	GPN2	Q08726	347 aa	Predicted RBP	5.09	□□□□□ -1.59
CBC2	YPL178W	MMT2	Q08970	484 aa		5.09	□□□□□ -1.59
CBC2	YPL178W	YPR064W	Q12492	139 aa		5.09	□□□□□ -1.59
CBC2	YPL178W	RPS17A	P02407	136 aa	Known RBP	5.08	□□□□□ -1.6
CBC2	YPL178W	LEU4	P06208	619 aa	Known RBP	5.08	□□□□□ -1.6
CBC2	YPL178W	ARD1	P07347	238 aa	Predicted RBP	5.08	□□□□□ -1.6
CBC2	YPL178W	RIP1	P08067	215 aa		5.08	□□□□□ -1.6
CBC2	YPL178W	MRP13	P12686	339 aa		5.08	□□□□□ -1.6
CBC2	YPL178W	RPS17B	P14127	136 aa	Known RBP	5.08	□□□□□ -1.6
CBC2	YPL178W	PRP4	P20053	465 aa	Known RBP	5.08	□□□□□ -1.6
CBC2	YPL178W	PHO91	P27514	894 aa		5.08	□□□□□ -1.6
CBC2	YPL178W	IDH2	P28241	369 aa	Known RBP	5.08	□□□□□ -1.6
CBC2	YPL178W	RAD14	P28519	371 aa		5.08	□□□□□ -1.6
CBC2	YPL178W	UGP1	P32861	499 aa	Known RBP	5.08	□□□□□ -1.6
CBC2	YPL178W	CUE2	P36075	443 aa	Known RBP	5.08	□□□□□ -1.6
CBC2	YPL178W	YIL086C	P40503	102 aa		5.08	□□□□□ -1.6
CBC2	YPL178W	UPF3	P48412	387 aa	Known RBP	5.08	□□□□□ -1.6
CBC2	YPL178W	RAD17	P48581	401 aa		5.08	□□□□□ -1.6
CBC2	YPL178W	BIO3	P50277	480 aa		5.08	□□□□□ -1.6
CBC2	YPL178W	RSM10	Q03201	203 aa		5.08	□□□□□ -1.6
CBC2	YPL178W	MMT1	Q03218	510 aa		5.08	□□□□□ -1.6
CBC2	YPL178W	YMR010W	Q03687	405 aa		5.08	□□□□□ -1.6
CBC2	YPL178W	VPS74	Q06385	345 aa		5.08	□□□□□ -1.6
CBC2	YPL178W	ARR1	Q06596	294 aa		5.08	□□□□□ -1.6
CBC2	YPL178W	CDA1	Q06702	301 aa		5.08	□□□□□ -1.6
CBC2	YPL178W	COS7	Q07788	383 aa		5.08	□□□□□ -1.6
CBC2	YPL178W	YEH1	Q07804	573 aa		5.08	□□□□□ -1.6
CBC2	YPL178W	NSL1	Q12143	216 aa		5.08	□□□□□ -1.6
CBC2	YPL178W	RPP2B	P02400	110 aa	Known RBP	5.07	□□□□□ -1.6
CBC2	YPL178W	HOM3	P10869	527 aa		5.07	□□□□□ -1.6
CBC2	YPL178W	CDC26	P14724	124 aa		5.07	□□□□□ -1.6
CBC2	YPL178W	NPR1	P22211	790 aa		5.07	□□□□□ -1.6
CBC2	YPL178W	SLM5	P25345	492 aa	Known RBP	5.07	□□□□□ -1.6
CBC2	YPL178W	CHA1	P25379	360 aa	Known RBP	5.07	□□□□□ -1.6
CBC2	YPL178W	SYP1	P25623	870 aa	Known RBP	5.07	□□□□□ -1.6
CBC2	YPL178W	RPL5	P26321	297 aa	Known RBP	5.07	□□□□□ -1.6
CBC2	YPL178W	BUD14	P27637	709 aa		5.07	□□□□□ -1.6
CBC2	YPL178W	YMC1	P32331	307 aa		5.07	□□□□□ -1.6
CBC2	YPL178W	MVD1	P32377	396 aa	Known RBP	5.07	□□□□□ -1.6
CBC2	YPL178W	STE14	P32584	239 aa		5.07	□□□□□ -1.6
CBC2	YPL178W	KAP122	P32767	1081 aa		5.07	□□□□□ -1.6
CBC2	YPL178W	SSO1	P32867	290 aa		5.07	□□□□□ -1.6
CBC2	YPL178W	SIP2	P34164	415 aa	Known RBP	5.07	□□□□□ -1.6
CBC2	YPL178W	SWH1	P35845	1188 aa		5.07	□□□□□ -1.6
CBC2	YPL178W	MNN2	P38069	597 aa		5.07	□□□□□ -1.6
CBC2	YPL178W	BNA4	P38169	460 aa		5.07	□□□□□ -1.6
CBC2	YPL178W	VRG4	P40107	337 aa		5.07	□□□□□ -1.6
CBC2	YPL178W	IAH1	P41734	238 aa		5.07	□□□□□ -1.6
CBC2	YPL178W	TIM54	P47045	478 aa		5.07	□□□□□ -1.6
CBC2	YPL178W	MUP1	P50276	574 aa		5.07	□□□□□ -1.6
CBC2	YPL178W	YGR266W	P53326	701 aa		5.07	□□□□□ -1.6
CBC2	YPL178W	ERG13	P54839	491 aa	Known RBP	5.07	□□□□□ -1.6
CBC2	YPL178W	YET2	Q04210	160 aa		5.07	□□□□□ -1.6
CBC2	YPL178W	SSQ1	Q05931	657 aa	Predicted RBP	5.07	□□□□□ -1.6
CBC2	YPL178W	FAR10	Q06001	478 aa		5.07	□□□□□ -1.6
CBC2	YPL178W	GMC2	Q06201	188 aa		5.07	□□□□□ -1.6
CBC2	YPL178W	YLL007C	Q07799	665 aa		5.07	□□□□□ -1.6
CBC2	YPL178W	YOL073C	Q08232	322 aa		5.07	□□□□□ -1.6
CBC2	YPL178W	DIA2	Q08496	732 aa	Predicted RBP	5.07	□□□□□ -1.6
CBC2	YPL178W	JLP1	Q12358	412 aa		5.07	□□□□□ -1.6
CBC2	YPL178W	YOL087C	Q99247	1116 aa		5.07	□□□□□ -1.6
CBC2	YPL178W	TPK2	P06245	380 aa		5.06	□□□□□ -1.6
CBC2	YPL178W	URA4	P20051	364 aa		5.06	□□□□□ -1.6
CBC2	YPL178W	VPS33	P20795	691 aa		5.06	□□□□□ -1.6
CBC2	YPL178W	CCA1	P21269	546 aa		5.06	□□□□□ -1.6
CBC2	YPL178W	GFD2	P25370	566 aa	Known RBP	5.06	□□□□□ -1.6
CBC2	YPL178W	CSM1	P25651	190 aa		5.06	□□□□□ -1.6
CBC2	YPL178W	CTS1	P29029	562 aa		5.06	□□□□□ -1.6
CBC2	YPL178W	SIN4	P32259	974 aa		5.06	□□□□□ -1.6
CBC2	YPL178W	SSE1	P32589	693 aa	Known RBP	5.06	□□□□□ -1.6
CBC2	YPL178W	CAT2	P32796	670 aa	Known RBP	5.06	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms