RNA–Protein interactions for RNA: YPL056C

LCL1, Transcript of Putative protein of unknown function, yeast

Gene LCL1, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCL1	YPL056C	CLD1	P53264	445 aa		2.57	□□□□□ -2
LCL1	YPL056C	SPC98	P53540	846 aa		2.57	□□□□□ -2
LCL1	YPL056C	BIO4	P53630	237 aa		2.57	□□□□□ -2
LCL1	YPL056C	YNR068C	P53754	272 aa		2.57	□□□□□ -2
LCL1	YPL056C	INN1	P53901	409 aa		2.57	□□□□□ -2
LCL1	YPL056C	MTQ1	P53944	314 aa		2.57	□□□□□ -2
LCL1	YPL056C	SAM50	P53969	484 aa		2.57	□□□□□ -2
LCL1	YPL056C	CWC27	Q02770	301 aa		2.57	□□□□□ -2
LCL1	YPL056C	YPL107W	Q02873	248 aa		2.57	□□□□□ -2
LCL1	YPL056C	YDR090C	Q03193	310 aa		2.57	□□□□□ -2
LCL1	YPL056C	SNU56	Q03782	492 aa	Known RBP	2.57	□□□□□ -2
LCL1	YPL056C	TPP1	Q03796	238 aa		2.57	□□□□□ -2
LCL1	YPL056C	TVP15	Q03860	143 aa		2.57	□□□□□ -2
LCL1	YPL056C	CSN9	Q03981	162 aa		2.57	□□□□□ -2
LCL1	YPL056C	YDR109C	Q04585	715 aa		2.57	□□□□□ -2
LCL1	YPL056C	SMA2	Q04658	369 aa		2.57	□□□□□ -2
LCL1	YPL056C	YLR283W	Q05867	314 aa		2.57	□□□□□ -2
LCL1	YPL056C	ECM38	Q05902	660 aa	Predicted RBP	2.57	□□□□□ -2
LCL1	YPL056C	ADY4	Q05955	493 aa		2.57	□□□□□ -2
LCL1	YPL056C	ECM7	Q06200	448 aa		2.57	□□□□□ -2
LCL1	YPL056C	MRL1	Q06815	381 aa		2.57	□□□□□ -2
LCL1	YPL056C	ACK1	Q07622	623 aa	Predicted RBP	2.57	□□□□□ -2
LCL1	YPL056C	ESC8	Q08119	714 aa		2.57	□□□□□ -2
LCL1	YPL056C	CUE5	Q08412	411 aa	Known RBP	2.57	□□□□□ -2
LCL1	YPL056C	UAF30	Q08747	228 aa		2.57	□□□□□ -2
LCL1	YPL056C	YPL199C	Q08954	240 aa		2.57	□□□□□ -2
LCL1	YPL056C	ENV7	Q12003	364 aa		2.57	□□□□□ -2
LCL1	YPL056C	FAL1	Q12099	399 aa	Known RBP	2.57	□□□□□ -2
LCL1	YPL056C	RTK1	Q12100	620 aa	Predicted RBP	2.57	□□□□□ -2
LCL1	YPL056C	YOR022C	Q12204	715 aa		2.57	□□□□□ -2
LCL1	YPL056C	MED1	Q12321	566 aa		2.57	□□□□□ -2
LCL1	YPL056C	PNS1	Q12412	539 aa		2.57	□□□□□ -2
LCL1	YPL056C	TY1A-DR3	Q12441	440 aa		2.57	□□□□□ -2
LCL1	YPL056C	NBL1	Q3E7Y6	73 aa		2.57	□□□□□ -2
LCL1	YPL056C	RIB3	Q99258	208 aa		2.57	□□□□□ -2
LCL1	YPL056C	ISN1	Q99312	450 aa		2.57	□□□□□ -2
LCL1	YPL056C	SAS5	Q99314	248 aa		2.57	□□□□□ -2
LCL1	YPL056C	FLO1	P32768	1537 aa		2.57	□□□□□ -2
LCL1	YPL056C	UBR2	Q07963	1872 aa		2.56	□□□□□ -2
LCL1	YPL056C	CDC28	P00546	298 aa	Known RBP	2.56	□□□□□ -2
LCL1	YPL056C	STF1	P01098	86 aa		2.56	□□□□□ -2
LCL1	YPL056C	HTB1	P02293	131 aa	Known RBP	2.56	□□□□□ -2
LCL1	YPL056C	HTB2	P02294	131 aa		2.56	□□□□□ -2
LCL1	YPL056C	ATP1	P07251	545 aa	Known RBP	2.56	□□□□□ -2
LCL1	YPL056C	SNF3	P10870	884 aa		2.56	□□□□□ -2
LCL1	YPL056C	GAL2	P13181	574 aa		2.56	□□□□□ -2
LCL1	YPL056C	ENA1	P13587	1091 aa		2.56	□□□□□ -2
LCL1	YPL056C	MTF1	P14908	341 aa	Known RBP	2.56	□□□□□ -2
LCL1	YPL056C	MIP1	P15801	1254 aa		2.56	□□□□□ -2
LCL1	YPL056C	COX11	P19516	300 aa	Known RBP	2.56	□□□□□ -2
LCL1	YPL056C	SIR1	P21691	654 aa		2.56	□□□□□ -2
LCL1	YPL056C	CPR4	P25334	318 aa		2.56	□□□□□ -2
LCL1	YPL056C	BEM1	P29366	551 aa		2.56	□□□□□ -2
LCL1	YPL056C	FAA1	P30624	700 aa	Known RBP	2.56	□□□□□ -2
LCL1	YPL056C	MRPL9	P31334	269 aa		2.56	□□□□□ -2
LCL1	YPL056C	PRO3	P32263	286 aa	Known RBP	2.56	□□□□□ -2
LCL1	YPL056C	MCM10	P32354	571 aa		2.56	□□□□□ -2
LCL1	YPL056C	ATP11	P32453	318 aa		2.56	□□□□□ -2
LCL1	YPL056C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	2.56	□□□□□ -2	not detected
LCL1	YPL056C	MUD1	P32605	298 aa	Known RBP	2.56	□□□□□ -2
LCL1	YPL056C	ISC10	P32645	267 aa		2.56	□□□□□ -2
LCL1	YPL056C	NGR1	P32831	672 aa	Known RBP	2.56	□□□□□ -2
LCL1	YPL056C	LHP1	P33399	275 aa	Known RBP	2.56	□□□□□ -2
LCL1	YPL056C	ZRT3	P34240	503 aa		2.56	□□□□□ -2
LCL1	YPL056C	RER2	P35196	286 aa		2.56	□□□□□ -2
LCL1	YPL056C	MRPL15	P36523	253 aa		2.56	□□□□□ -2
LCL1	YPL056C	ECM8	P38246	354 aa		2.56	□□□□□ -2
LCL1	YPL056C	IST2	P38250	946 aa		2.56	□□□□□ -2
LCL1	YPL056C	FTH1	P38310	465 aa		2.56	□□□□□ -2
LCL1	YPL056C	LAG1	P38703	411 aa		2.56	□□□□□ -2
LCL1	YPL056C	RRP3	P38712	501 aa	Known RBP	2.56	□□□□□ -2
LCL1	YPL056C	UBA4	P38820	440 aa		2.56	□□□□□ -2
LCL1	YPL056C	NSG1	P38837	291 aa		2.56	□□□□□ -2
LCL1	YPL056C	FLC2	P39719	783 aa		2.56	□□□□□ -2
LCL1	YPL056C	UBP5	P39944	805 aa		2.56	□□□□□ -2
LCL1	YPL056C	SCC4	P40090	624 aa		2.56	□□□□□ -2
LCL1	YPL056C	YIL166C	P40445	542 aa		2.56	□□□□□ -2
LCL1	YPL056C	NIT1	P40447	199 aa		2.56	□□□□□ -2
LCL1	YPL056C	ICE2	P40499	491 aa		2.56	□□□□□ -2
LCL1	YPL056C	YIL024C	P40543	189 aa		2.56	□□□□□ -2
LCL1	YPL056C	AAD14	P42884	376 aa		2.56	□□□□□ -2
LCL1	YPL056C	HXT10	P43581	546 aa		2.56	□□□□□ -2
LCL1	YPL056C	ARC1	P46672	376 aa	Known RBP	2.56	□□□□□ -2
LCL1	YPL056C	AIM23	P47015	356 aa		2.56	□□□□□ -2
LCL1	YPL056C	YJR056C	P47115	236 aa		2.56	□□□□□ -2
LCL1	YPL056C	ECM27	P47144	725 aa		2.56	□□□□□ -2
LCL1	YPL056C	LYS20	P48570	428 aa	Known RBP	2.56	□□□□□ -2
LCL1	YPL056C	RPS12	P48589	143 aa	Known RBP	2.56	□□□□□ -2
LCL1	YPL056C	CTR1	P49573	406 aa		2.56	□□□□□ -2
LCL1	YPL056C	TAF4	P50105	388 aa		2.56	□□□□□ -2
LCL1	YPL056C	UFD1	P53044	361 aa		2.56	□□□□□ -2
LCL1	YPL056C	VOA1	P53262	265 aa		2.56	□□□□□ -2
LCL1	YPL056C	ARE2	P53629	642 aa	Known RBP	2.56	□□□□□ -2
LCL1	YPL056C	YNR065C	P53751	1116 aa		2.56	□□□□□ -2
LCL1	YPL056C	CBK1	P53894	756 aa		2.56	□□□□□ -2
LCL1	YPL056C	HXT11	P54862	567 aa		2.56	□□□□□ -2
LCL1	YPL056C	ENA2	Q01896	1091 aa		2.56	□□□□□ -2
LCL1	YPL056C	YPL108W	Q02872	168 aa	Predicted RBP	2.56	□□□□□ -2
LCL1	YPL056C	RLI1	Q03195	608 aa	Known RBP	2.56	□□□□□ -2
LCL1	YPL056C	PRM15	Q03262	622 aa		2.56	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms