RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W PPZ1P26570 692 aa3.04□□□□□ -1.92
SRL1YOR247W NDI1P32340 513 aa3.04□□□□□ -1.92
SRL1YOR247W NIP1P32497 812 aaKnown RBP3.04□□□□□ -1.92
SRL1YOR247W SIP2P34164 415 aaKnown RBP3.04□□□□□ -1.92
SRL1YOR247W RRP4P38792 359 aaKnown RBP3.04□□□□□ -1.92
SRL1YOR247W STN1P38960 494 aa3.04□□□□□ -1.92
SRL1YOR247W LYS1P38998 373 aaRIP-Chip data3.04□□□□□ -1.92 RIP-Chip
SRL1YOR247W VPS52P39904 641 aa3.04□□□□□ -1.92
SRL1YOR247W YIL089WP40500 205 aa3.04□□□□□ -1.92
SRL1YOR247W SSN8P47821 323 aa3.04□□□□□ -1.92
SRL1YOR247W SCW4P53334 386 aaKnown RBP3.04□□□□□ -1.92
SRL1YOR247W KTR5P53966 522 aaPredicted RBP3.04□□□□□ -1.92
SRL1YOR247W ADA2Q02336 434 aa3.04□□□□□ -1.92
SRL1YOR247W RBA50Q04418 439 aa3.04□□□□□ -1.92
SRL1YOR247W FMP42Q04991 504 aa3.04□□□□□ -1.92
SRL1YOR247W COX3P00420 269 aa3.03□□□□□ -1.92
SRL1YOR247W YPT1P01123 206 aaKnown RBP3.03□□□□□ -1.92
SRL1YOR247W ARG4P04076 463 aaPredicted RBP3.03□□□□□ -1.92
SRL1YOR247W DAP2P18962 818 aa3.03□□□□□ -1.92
SRL1YOR247W FAA1P30624 700 aaKnown RBP3.03□□□□□ -1.92
SRL1YOR247W SPC110P32380 944 aa3.03□□□□□ -1.92
SRL1YOR247W PTR2P32901 601 aa3.03□□□□□ -1.92
SRL1YOR247W ATO2P32907 282 aa3.03□□□□□ -1.92
SRL1YOR247W YCR041WP37265 110 aa3.03□□□□□ -1.92
SRL1YOR247W ADH5P38113 351 aaKnown RBP3.03□□□□□ -1.92
SRL1YOR247W BZZ1P38822 633 aa3.03□□□□□ -1.92
SRL1YOR247W YAL037WP39728 267 aa3.03□□□□□ -1.92
SRL1YOR247W YIL152WP40455 235 aa3.03□□□□□ -1.92
SRL1YOR247W YPS6P40583 537 aa3.03□□□□□ -1.92
SRL1YOR247W PAC11P40960 533 aa3.03□□□□□ -1.92
SRL1YOR247W RPA34P47006 233 aaPredicted RBP3.03□□□□□ -1.92
SRL1YOR247W GWT1P47026 490 aa3.03□□□□□ -1.92
SRL1YOR247W IKS1P47042 667 aa3.03□□□□□ -1.92
SRL1YOR247W YIP5P53108 310 aa3.03□□□□□ -1.92
SRL1YOR247W ROG1P53118 685 aa3.03□□□□□ -1.92
SRL1YOR247W CUE3P53137 624 aaKnown RBP3.03□□□□□ -1.92
SRL1YOR247W AQR1P53943 586 aa3.03□□□□□ -1.92
SRL1YOR247W ODC1Q03028 310 aa3.03□□□□□ -1.92
SRL1YOR247W RLI1Q03195 608 aaKnown RBP3.03□□□□□ -1.92
SRL1YOR247W MMT1Q03218 510 aa3.03□□□□□ -1.92
SRL1YOR247W YMR087WQ04299 284 aa3.03□□□□□ -1.92
SRL1YOR247W YMR034CQ05131 434 aaPredicted RBP3.03□□□□□ -1.92
SRL1YOR247W IPK1Q06667 281 aa3.03□□□□□ -1.92
SRL1YOR247W SNA4Q07549 140 aa3.03□□□□□ -1.92
SRL1YOR247W SKI7Q08491 747 aaPredicted RBP3.03□□□□□ -1.92
SRL1YOR247W GEP3Q08622 556 aa3.03□□□□□ -1.92
SRL1YOR247W ATG34Q12292 412 aa3.03□□□□□ -1.92
SRL1YOR247W TAL1P15019 335 aaKnown RBP3.02□□□□□ -1.93
SRL1YOR247W UBA1P22515 1024 aaKnown RBP3.02□□□□□ -1.93
SRL1YOR247W CTR86P25355 563 aa3.02□□□□□ -1.93
SRL1YOR247W NRP1P32770 719 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
SRL1YOR247W ARC40P38328 384 aaKnown RBP3.02□□□□□ -1.93
SRL1YOR247W INM1P38710 295 aa3.02□□□□□ -1.93
SRL1YOR247W MNL1P38888 796 aa3.02□□□□□ -1.93
SRL1YOR247W YER079WP40052 210 aaKnown RBP3.02□□□□□ -1.93
SRL1YOR247W SHO1P40073 367 aa3.02□□□□□ -1.93
SRL1YOR247W YIL169CP40442 995 aa3.02□□□□□ -1.93
SRL1YOR247W FRE4P53746 719 aa3.02□□□□□ -1.93
SRL1YOR247W GPI15P53961 229 aa3.02□□□□□ -1.93
SRL1YOR247W DIG1Q03063 452 aaKnown RBP3.02□□□□□ -1.93
SRL1YOR247W RSN1Q03516 953 aa3.02□□□□□ -1.93
SRL1YOR247W BET5Q03630 159 aa3.02□□□□□ -1.93
SRL1YOR247W URH1Q04179 340 aa3.02□□□□□ -1.93
SRL1YOR247W MGR3Q04472 501 aa3.02□□□□□ -1.93
SRL1YOR247W REX3Q12090 404 aa3.02□□□□□ -1.93
SRL1YOR247W PSY3Q12318 242 aa3.02□□□□□ -1.93
SRL1YOR247W DST1P07273 309 aa3.01□□□□□ -1.93
SRL1YOR247W NFT1P0CE68 1218 aa3.01□□□□□ -1.93
SRL1YOR247W MTF1P14908 341 aaKnown RBP3.01□□□□□ -1.93
SRL1YOR247W LSB5P25369 354 aa3.01□□□□□ -1.93
SRL1YOR247W NDC1P32500 655 aa3.01□□□□□ -1.93
SRL1YOR247W YBR056WP38081 501 aa3.01□□□□□ -1.93
SRL1YOR247W MET30P39014 640 aa3.01□□□□□ -1.93
SRL1YOR247W SAD1P43589 448 aa3.01□□□□□ -1.93
SRL1YOR247W PRM1P53835 661 aa3.01□□□□□ -1.93
SRL1YOR247W PDR16P53860 351 aaKnown RBP3.01□□□□□ -1.93
SRL1YOR247W YNL143CP53908 130 aa3.01□□□□□ -1.93
SRL1YOR247W MRP51Q02950 344 aa3.01□□□□□ -1.93
SRL1YOR247W RRB1Q04225 511 aaKnown RBP3.01□□□□□ -1.93
SRL1YOR247W TIM18Q08749 192 aa3.01□□□□□ -1.93
SRL1YOR247W PKH2Q12236 1081 aaKnown RBP3.01□□□□□ -1.93
SRL1YOR247W HIF1Q12373 385 aa3.01□□□□□ -1.93
SRL1YOR247W ORT1Q12375 292 aa3.01□□□□□ -1.93
SRL1YOR247W ICT1Q12385 394 aa3.01□□□□□ -1.93
SRL1YOR247W TEF1P02994 458 aaKnown RBP3□□□□□ -1.93
SRL1YOR247W ILV5P06168 395 aaKnown RBP3□□□□□ -1.93
SRL1YOR247W CHS1P08004 1131 aa3□□□□□ -1.93
SRL1YOR247W SPO12P17123 173 aa3□□□□□ -1.93
SRL1YOR247W SLM5P25345 492 aaKnown RBP3□□□□□ -1.93
SRL1YOR247W RDS1P25611 832 aa3□□□□□ -1.93
SRL1YOR247W TIP1P27654 210 aaPredicted RBP3□□□□□ -1.93
SRL1YOR247W GLC7P32598 312 aaKnown RBP3□□□□□ -1.93
SRL1YOR247W YSC83P32792 385 aa3□□□□□ -1.93
SRL1YOR247W ATP3P38077 311 aaKnown RBP3□□□□□ -1.93
SRL1YOR247W QDR3P38227 689 aa3□□□□□ -1.93
SRL1YOR247W GPI16P38875 610 aa3□□□□□ -1.93
SRL1YOR247W ALG8P40351 577 aa3□□□□□ -1.93
SRL1YOR247W NAS2P40555 220 aa3□□□□□ -1.93
SRL1YOR247W TES1P41903 349 aaKnown RBP3□□□□□ -1.93
SRL1YOR247W POP6P53218 158 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms