RNA–Protein interactions for RNA: YNL172W

APC1, Transcript of Largest subunit of the Anaphase-Promoting Complex/Cyclosome, yeast

Gene APC1, Length 5,247 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APC1	YNL172W	PIG2	P40187	538 aa		4.23	□□□□□ -1.73
APC1	YNL172W	FMP32	P43557	207 aa		4.23	□□□□□ -1.73
APC1	YNL172W	AMA1	P50082	593 aa		4.23	□□□□□ -1.73
APC1	YNL172W	ROY1	Q04847	553 aa		4.23	□□□□□ -1.73
APC1	YNL172W	VIK1	Q12045	647 aa		4.23	□□□□□ -1.73
APC1	YNL172W	PRP46	Q12417	451 aa	Predicted RBP	4.23	□□□□□ -1.73
APC1	YNL172W	HRP1	Q99383	534 aa	Known RBP	4.23	□□□□□ -1.73
APC1	YNL172W	COX5A	P00424	153 aa		4.23	□□□□□ -1.73
APC1	YNL172W	MRPS28	P21771	286 aa		4.23	□□□□□ -1.73
APC1	YNL172W	YCK2	P23292	546 aa	Known RBP	4.23	□□□□□ -1.73
APC1	YNL172W	MEF1	P25039	761 aa		4.23	□□□□□ -1.73
APC1	YNL172W	PBN1	P25580	416 aa		4.23	□□□□□ -1.73
APC1	YNL172W	ECM23	Q02710	187 aa		4.23	□□□□□ -1.73
APC1	YNL172W	YPL107W	Q02873	248 aa		4.23	□□□□□ -1.73
APC1	YNL172W	SLD7	Q08457	257 aa		4.23	□□□□□ -1.73
APC1	YNL172W	CHS5	Q12114	671 aa	Known RBP	4.23	□□□□□ -1.73
APC1	YNL172W	MET8	P15807	274 aa		4.23	□□□□□ -1.73
APC1	YNL172W	GRX2	P17695	143 aa	Known RBP	4.23	□□□□□ -1.73
APC1	YNL172W	CDC42	P19073	191 aa		4.23	□□□□□ -1.73
APC1	YNL172W	RFA2	P26754	273 aa	Known RBP	4.23	□□□□□ -1.73
APC1	YNL172W	GTS1	P40956	396 aa		4.23	□□□□□ -1.73
APC1	YNL172W	CIS3	P47001	227 aa		4.23	□□□□□ -1.73
APC1	YNL172W	BNA1	P47096	177 aa		4.23	□□□□□ -1.73
APC1	YNL172W	RBL2	P48606	106 aa	Known RBP	4.23	□□□□□ -1.73
APC1	YNL172W	TLG1	Q03322	224 aa		4.23	□□□□□ -1.73
APC1	YNL172W	CGI121	Q03705	181 aa	Known RBP	4.23	□□□□□ -1.73
APC1	YNL172W	GPI17	Q04080	534 aa		4.23	□□□□□ -1.73
APC1	YNL172W	BUD22	Q04347	519 aa	Known RBP	4.23	□□□□□ -1.73
APC1	YNL172W	YAR066W	P0CX18	203 aa		4.23	□□□□□ -1.73
APC1	YNL172W	YHR214W	P0CX19	203 aa		4.23	□□□□□ -1.73
APC1	YNL172W	SRV2	P17555	526 aa	Known RBP	4.23	□□□□□ -1.73
APC1	YNL172W	SLM5	P25345	492 aa	Known RBP	4.23	□□□□□ -1.73
APC1	YNL172W	SEC9	P40357	651 aa		4.23	□□□□□ -1.73
APC1	YNL172W	MET28	P40573	187 aa		4.23	□□□□□ -1.73
APC1	YNL172W	REE1	P40893	198 aa		4.23	□□□□□ -1.73
APC1	YNL172W	STB2	P46679	850 aa		4.23	□□□□□ -1.73
APC1	YNL172W	ALB1	P47019	175 aa	Predicted RBP	4.23	□□□□□ -1.73
APC1	YNL172W	CUS2	P53830	285 aa	Predicted RBP	4.23	□□□□□ -1.73
APC1	YNL172W	PFA5	Q03289	374 aa		4.23	□□□□□ -1.73
APC1	YNL172W	EFR3	Q03653	782 aa	Known RBP	4.23	□□□□□ -1.73
APC1	YNL172W	ERB1	Q04660	807 aa	Known RBP	4.23	□□□□□ -1.73
APC1	YNL172W	HAA1	Q12753	694 aa	Known RBP	4.23	□□□□□ -1.73
APC1	YNL172W	RPT5	P33297	434 aa	Known RBP	4.22	□□□□□ -1.73
APC1	YNL172W	DPB11	P47027	764 aa	Predicted RBP	4.22	□□□□□ -1.73
APC1	YNL172W	YJL016W	P47072	561 aa		4.22	□□□□□ -1.73
APC1	YNL172W	HXT16	P47185	567 aa		4.22	□□□□□ -1.73
APC1	YNL172W	YGL260W	P53056	76 aa		4.22	□□□□□ -1.73
APC1	YNL172W	EMC4	P53073	190 aa		4.22	□□□□□ -1.73
APC1	YNL172W	MTM1	P53320	366 aa		4.22	□□□□□ -1.73
APC1	YNL172W	VAC7	P53950	1165 aa		4.22	□□□□□ -1.73
APC1	YNL172W	YMR099C	Q03161	297 aa	Known RBP	4.22	□□□□□ -1.73
APC1	YNL172W	YKU80	Q04437	629 aa		4.22	□□□□□ -1.73
APC1	YNL172W	PML1	Q07930	204 aa	Predicted RBP	4.22	□□□□□ -1.73
APC1	YNL172W	STE3	P06783	470 aa		4.22	□□□□□ -1.73
APC1	YNL172W	CDC4	P07834	779 aa		4.22	□□□□□ -1.73
APC1	YNL172W	ERD1	P16151	362 aa		4.22	□□□□□ -1.73
APC1	YNL172W	RNA14	P25298	677 aa	Known RBP	4.22	□□□□□ -1.73
APC1	YNL172W	BUD5	P25300	642 aa	Predicted RBP	4.22	□□□□□ -1.73
APC1	YNL172W	CSM1	P25651	190 aa		4.22	□□□□□ -1.73
APC1	YNL172W	SKN1	P33336	771 aa		4.22	□□□□□ -1.73
APC1	YNL172W	JEM1	P40358	645 aa		4.22	□□□□□ -1.73
APC1	YNL172W	YJR039W	P47107	1121 aa		4.22	□□□□□ -1.73
APC1	YNL172W	RPN14	P53196	417 aa		4.22	□□□□□ -1.73
APC1	YNL172W	YOR365C	Q08844	703 aa		4.22	□□□□□ -1.73
APC1	YNL172W	SRL2	Q12020	392 aa		4.22	□□□□□ -1.73
APC1	YNL172W	RPN6	Q12377	434 aa		4.22	□□□□□ -1.73
APC1	YNL172W	APC2	Q12440	853 aa		4.22	□□□□□ -1.73
APC1	YNL172W	ACP1	P32463	125 aa		4.22	□□□□□ -1.73
APC1	YNL172W	SGF73	P53165	657 aa		4.22	□□□□□ -1.73
APC1	YNL172W	SSL2	Q00578	843 aa		4.22	□□□□□ -1.73
APC1	YNL172W	UGO1	Q03327	502 aa		4.22	□□□□□ -1.73
APC1	YNL172W	PPM1	Q04081	328 aa		4.22	□□□□□ -1.73
APC1	YNL172W	SOV1	Q04748	898 aa		4.22	□□□□□ -1.73
APC1	YNL172W	PUN1	Q06991	263 aa		4.22	□□□□□ -1.73
APC1	YNL172W	FRA1	Q07825	749 aa		4.22	□□□□□ -1.73
APC1	YNL172W	YEF1	P32622	495 aa		4.22	□□□□□ -1.73
APC1	YNL172W	MNN1	P39106	762 aa		4.22	□□□□□ -1.73
APC1	YNL172W	SSY5	P47002	699 aa		4.22	□□□□□ -1.73
APC1	YNL172W	EMC2	P47133	292 aa	Known RBP	4.22	□□□□□ -1.73
APC1	YNL172W	YIP1	P53039	248 aa		4.22	□□□□□ -1.73
APC1	YNL172W	CUE5	Q08412	411 aa	Known RBP	4.22	□□□□□ -1.73
APC1	YNL172W	YNG1	Q08465	219 aa		4.22	□□□□□ -1.73
APC1	YNL172W	MSG5	P38590	489 aa		4.21	□□□□□ -1.73
APC1	YNL172W	TAT2	P38967	592 aa		4.21	□□□□□ -1.73
APC1	YNL172W	DLD3	P39976	496 aa	Known RBP	4.21	□□□□□ -1.73
APC1	YNL172W	TAF6	P53040	516 aa		4.21	□□□□□ -1.73
APC1	YNL172W	HOT1	Q03213	719 aa		4.21	□□□□□ -1.73
APC1	YNL172W	YPR097W	Q06839	1073 aa		4.21	□□□□□ -1.73
APC1	YNL172W	PER33	Q12144	273 aa		4.21	□□□□□ -1.73
APC1	YNL172W	FLP1	P03870	423 aa		4.21	□□□□□ -1.74
APC1	YNL172W	SEC53	P07283	254 aa	Known RBP	4.21	□□□□□ -1.74
APC1	YNL172W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
APC1	YNL172W	NRK1	P53915	240 aa		4.21	□□□□□ -1.74
APC1	YNL172W	GAS3	Q03655	524 aa		4.21	□□□□□ -1.74
APC1	YNL172W	ECM18	Q04623	453 aa		4.21	□□□□□ -1.74
APC1	YNL172W	SEC17	P32602	292 aa		4.21	□□□□□ -1.74
APC1	YNL172W	BSC5	P53755	489 aa		4.21	□□□□□ -1.74
APC1	YNL172W	OAZ1	Q02803	292 aa		4.21	□□□□□ -1.74
APC1	YNL172W	HAL9	Q12180	1030 aa		4.21	□□□□□ -1.74
APC1	YNL172W	GAL7	P08431	366 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms