RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM3, Length 270 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM3	YLR438C-A	PSA1	P41940	361 aa	Known RBP	12.06	□□□□□ -0.48
LSM3	YLR438C-A	UGO1	Q03327	502 aa		12.06	□□□□□ -0.48
LSM3	YLR438C-A	MFG1	Q07684	458 aa		12.06	□□□□□ -0.48
LSM3	YLR438C-A	YLR036C	Q07986	203 aa		12.06	□□□□□ -0.48
LSM3	YLR438C-A	MLH3	Q12083	715 aa		12.06	□□□□□ -0.48
LSM3	YLR438C-A	GLO4	Q12320	285 aa		12.06	□□□□□ -0.48
LSM3	YLR438C-A	UGA1	P17649	471 aa		12.05	□□□□□ -0.48
LSM3	YLR438C-A	DAP2	P18962	818 aa		12.05	□□□□□ -0.48
LSM3	YLR438C-A	TAH1	P25638	111 aa	Predicted RBP	12.05	□□□□□ -0.48
LSM3	YLR438C-A	YBR238C	P38330	731 aa	Known RBP	12.05	□□□□□ -0.48
LSM3	YLR438C-A	RCK1	P38622	512 aa		12.05	□□□□□ -0.48
LSM3	YLR438C-A	MNN9	P39107	395 aa	Known RBP	12.05	□□□□□ -0.48
LSM3	YLR438C-A	DSS1	P39112	969 aa		12.05	□□□□□ -0.48
LSM3	YLR438C-A	MTW1	P39731	289 aa		12.05	□□□□□ -0.48
LSM3	YLR438C-A	PTC2	P39966	464 aa	Known RBP	12.05	□□□□□ -0.48
LSM3	YLR438C-A	PMT4	P46971	762 aa		12.05	□□□□□ -0.48
LSM3	YLR438C-A	NOP9	P47077	666 aa	Known RBP	12.05	□□□□□ -0.48
LSM3	YLR438C-A	TOM22	P49334	152 aa		12.05	□□□□□ -0.48
LSM3	YLR438C-A	DSL1	P53847	754 aa		12.05	□□□□□ -0.48
LSM3	YLR438C-A	NAN1	Q02931	896 aa	Known RBP	12.05	□□□□□ -0.48
LSM3	YLR438C-A	ATP25	Q03153	612 aa		12.05	□□□□□ -0.48
LSM3	YLR438C-A	ATG38	Q05789	226 aa	Known RBP	12.05	□□□□□ -0.48
LSM3	YLR438C-A	PRP2	P20095	876 aa	Predicted RBP	12.04	□□□□□ -0.48
LSM3	YLR438C-A	NPR1	P22211	790 aa		12.04	□□□□□ -0.48
LSM3	YLR438C-A	PDX3	P38075	228 aa	Known RBP	12.04	□□□□□ -0.48
LSM3	YLR438C-A	FAA2	P39518	744 aa		12.04	□□□□□ -0.48
LSM3	YLR438C-A	MRPS18	P42847	217 aa		12.04	□□□□□ -0.48
LSM3	YLR438C-A	YGR016W	P53209	190 aa		12.04	□□□□□ -0.48
LSM3	YLR438C-A	HMO1	Q03973	246 aa	Known RBP	12.04	□□□□□ -0.48
LSM3	YLR438C-A	RQC1	Q05468	723 aa	Known RBP	12.04	□□□□□ -0.48
LSM3	YLR438C-A	YDR061W	Q12298	539 aa		12.04	□□□□□ -0.48
LSM3	YLR438C-A	VPS33	P20795	691 aa		12.03	□□□□□ -0.48
LSM3	YLR438C-A	MSB1	P21339	1137 aa	Known RBP	12.03	□□□□□ -0.48
LSM3	YLR438C-A	PEX3	P28795	441 aa		12.03	□□□□□ -0.48
LSM3	YLR438C-A	TAF14	P35189	244 aa		12.03	□□□□□ -0.48
LSM3	YLR438C-A	YHR218W	P38899	603 aa		12.03	□□□□□ -0.48
LSM3	YLR438C-A	PRP39	P39682	629 aa	Known RBP	12.03	□□□□□ -0.48
LSM3	YLR438C-A	YJL043W	P47053	257 aa		12.03	□□□□□ -0.48
LSM3	YLR438C-A	PAC10	P48363	199 aa		12.03	□□□□□ -0.48
LSM3	YLR438C-A	NAM8	Q00539	523 aa	Known RBP	12.03	□□□□□ -0.48
LSM3	YLR438C-A	PEX12	Q04370	399 aa		12.03	□□□□□ -0.48
LSM3	YLR438C-A	CBP2	P03874	630 aa	Predicted RBP	12.02	□□□□□ -0.49
LSM3	YLR438C-A	DPH5	P32469	300 aa	Predicted RBP	12.02	□□□□□ -0.49
LSM3	YLR438C-A	DOA1	P36037	715 aa		12.02	□□□□□ -0.49
LSM3	YLR438C-A	SCO2	P38072	301 aa		12.02	□□□□□ -0.49
LSM3	YLR438C-A	AIM2	P39721	246 aa		12.02	□□□□□ -0.49
LSM3	YLR438C-A	ECM10	P39987	644 aa		12.02	□□□□□ -0.49
LSM3	YLR438C-A	LYS12	P40495	371 aa	Known RBP	12.02	□□□□□ -0.49
LSM3	YLR438C-A	YKU80	Q04437	629 aa		12.02	□□□□□ -0.49
LSM3	YLR438C-A	TEN1	Q07921	160 aa		12.02	□□□□□ -0.49
LSM3	YLR438C-A	YOL036W	Q08206	761 aa		12.02	□□□□□ -0.49
LSM3	YLR438C-A	SEC39	Q12745	709 aa		12.02	□□□□□ -0.49
LSM3	YLR438C-A	GAL4	P04386	881 aa		12.01	□□□□□ -0.49
LSM3	YLR438C-A	HTA1	P04911	132 aa	Known RBP	12.01	□□□□□ -0.49
LSM3	YLR438C-A	CHA1	P25379	360 aa	Known RBP	12.01	□□□□□ -0.49
LSM3	YLR438C-A	PET112	P33893	541 aa		12.01	□□□□□ -0.49
LSM3	YLR438C-A	MRPL15	P36523	253 aa		12.01	□□□□□ -0.49
LSM3	YLR438C-A	LAS21	P40367	830 aa		12.01	□□□□□ -0.49
LSM3	YLR438C-A	TRM9	P49957	279 aa		12.01	□□□□□ -0.49
LSM3	YLR438C-A	OAZ1	Q02803	292 aa		12.01	□□□□□ -0.49
LSM3	YLR438C-A	CMK2	P22517	447 aa		12	□□□□□ -0.49
LSM3	YLR438C-A	SPB1	P25582	841 aa	Predicted RBP	12	□□□□□ -0.49
LSM3	YLR438C-A	CMK1	P27466	446 aa	Known RBP	12	□□□□□ -0.49
LSM3	YLR438C-A	YMC1	P32331	307 aa		12	□□□□□ -0.49
LSM3	YLR438C-A	STP2	P38704	541 aa		12	□□□□□ -0.49
LSM3	YLR438C-A	OCA5	P38738	679 aa		12	□□□□□ -0.49
LSM3	YLR438C-A	RIC1	P40395	1056 aa		12	□□□□□ -0.49
LSM3	YLR438C-A	ARF3	P40994	183 aa	RIP-Chip data	12	□□□□□ -0.49	not detected
LSM3	YLR438C-A	MDJ2	P42834	146 aa		12	□□□□□ -0.49
LSM3	YLR438C-A	YNR068C	P53754	272 aa		12	□□□□□ -0.49
LSM3	YLR438C-A	YNL095C	P53932	642 aa		12	□□□□□ -0.49
LSM3	YLR438C-A	ISR1	Q06098	443 aa	Known RBP	12	□□□□□ -0.49
LSM3	YLR438C-A	YTM1	Q12024	460 aa	Predicted RBP	12	□□□□□ -0.49
LSM3	YLR438C-A	NSI1	Q12457	570 aa		12	□□□□□ -0.49
LSM3	YLR438C-A	MHF2	Q3E829	80 aa		12	□□□□□ -0.49
LSM3	YLR438C-A	CLB3	P24870	427 aa		11.99	□□□□□ -0.49
LSM3	YLR438C-A	YCL049C	P25577	312 aa		11.99	□□□□□ -0.49
LSM3	YLR438C-A	SKG1	P36169	355 aa		11.99	□□□□□ -0.49
LSM3	YLR438C-A	RBG1	P39729	369 aa		11.99	□□□□□ -0.49
LSM3	YLR438C-A	FMP33	P46998	180 aa		11.99	□□□□□ -0.49
LSM3	YLR438C-A	YAT1	P80235	687 aa		11.99	□□□□□ -0.49
LSM3	YLR438C-A	GPI11	Q06636	219 aa		11.99	□□□□□ -0.49
LSM3	YLR438C-A	YEH1	Q07804	573 aa		11.99	□□□□□ -0.49
LSM3	YLR438C-A	THP1	Q08231	455 aa		11.99	□□□□□ -0.49
LSM3	YLR438C-A	MDM12	Q92328	271 aa		11.99	□□□□□ -0.49
LSM3	YLR438C-A	SEN1	Q00416	2231 aa	Known RBP	11.99	□□□□□ -0.49
LSM3	YLR438C-A	RAD7	P06779	565 aa		11.98	□□□□□ -0.49
LSM3	YLR438C-A	RPL40A	P0CH08	128 aa	Known RBP	11.98	□□□□□ -0.49
LSM3	YLR438C-A	RPL40B	P0CH09	128 aa	Known RBP	11.98	□□□□□ -0.49
LSM3	YLR438C-A	GAL3	P13045	520 aa		11.98	□□□□□ -0.49
LSM3	YLR438C-A	ATG14	P38270	344 aa		11.98	□□□□□ -0.49
LSM3	YLR438C-A	UME6	P39001	836 aa		11.98	□□□□□ -0.49
LSM3	YLR438C-A	RHO4	Q00246	291 aa		11.98	□□□□□ -0.49
LSM3	YLR438C-A	YKL033W-A	Q86ZR7	236 aa		11.98	□□□□□ -0.49
LSM3	YLR438C-A	DAL82	P21705	255 aa		11.97	□□□□□ -0.49
LSM3	YLR438C-A	YCR006C	P25350	157 aa		11.97	□□□□□ -0.49
LSM3	YLR438C-A	CDC3	P32457	520 aa	Known RBP	11.97	□□□□□ -0.49
LSM3	YLR438C-A	UGP1	P32861	499 aa	Known RBP	11.97	□□□□□ -0.49
LSM3	YLR438C-A	YBR241C	P38142	488 aa		11.97	□□□□□ -0.49
LSM3	YLR438C-A	YHL012W	P38709	493 aa		11.97	□□□□□ -0.49

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