RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeastyeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR1YKR101W RPL42AP0CX27 106 aaKnown RBP4.41□□□□□ -1.7
SIR1YKR101W RPL42BP0CX28 106 aaKnown RBP4.41□□□□□ -1.7
SIR1YKR101W TAL1P15019 335 aaKnown RBP4.41□□□□□ -1.7
SIR1YKR101W YAP1P19880 650 aaKnown RBP4.41□□□□□ -1.7
SIR1YKR101W RAD24P32641 659 aa4.41□□□□□ -1.7
SIR1YKR101W SPC34P36131 295 aa4.41□□□□□ -1.7
SIR1YKR101W RTS2P40962 232 aa4.41□□□□□ -1.7
SIR1YKR101W SNO3P43544 222 aa4.41□□□□□ -1.7
SIR1YKR101W GPI1P53306 609 aa4.41□□□□□ -1.7
SIR1YKR101W YIF1P53845 314 aaKnown RBP4.41□□□□□ -1.7
SIR1YKR101W VTC3Q02725 835 aa4.41□□□□□ -1.7
SIR1YKR101W RBA50Q04418 439 aa4.41□□□□□ -1.7
SIR1YKR101W IVY1Q04934 453 aa4.41□□□□□ -1.7
SIR1YKR101W RPO21P04050 1733 aaKnown RBP4.41□□□□□ -1.7
SIR1YKR101W GEA1P47102 1408 aaPredicted RBP4.41□□□□□ -1.7
SIR1YKR101W MMS1Q06211 1407 aa4.41□□□□□ -1.7
SIR1YKR101W NTE1Q04958 1679 aa4.4□□□□□ -1.7
SIR1YKR101W NFT1P0CE68 1218 aa4.4□□□□□ -1.7
SIR1YKR101W YER190C-BP0CX94 160 aa4.4□□□□□ -1.7
SIR1YKR101W YEL077W-AP0CX95 160 aa4.4□□□□□ -1.7
SIR1YKR101W YGR296C-BP0CX96 160 aa4.4□□□□□ -1.7
SIR1YKR101W YPL283W-BP0CX97 160 aa4.4□□□□□ -1.7
SIR1YKR101W YPR204C-AP0CX98 160 aa4.4□□□□□ -1.7
SIR1YKR101W HOM2P13663 365 aaKnown RBP4.4□□□□□ -1.7
SIR1YKR101W PHO91P27514 894 aa4.4□□□□□ -1.7
SIR1YKR101W GDT1P38301 280 aaPredicted RBP4.4□□□□□ -1.7
SIR1YKR101W ERG7P38604 731 aa4.4□□□□□ -1.7
SIR1YKR101W MNL1P38888 796 aa4.4□□□□□ -1.7
SIR1YKR101W GAT2P40209 560 aa4.4□□□□□ -1.7
SIR1YKR101W CFD1P40558 293 aa4.4□□□□□ -1.7
SIR1YKR101W YNL234WP53857 426 aa4.4□□□□□ -1.7
SIR1YKR101W ESBP6P53918 673 aa4.4□□□□□ -1.7
SIR1YKR101W ABZ2Q03266 374 aa4.4□□□□□ -1.7
SIR1YKR101W BNA5Q05979 453 aa4.4□□□□□ -1.7
SIR1YKR101W THI20Q08224 551 aa4.4□□□□□ -1.7
SIR1YKR101W MDY2Q12285 212 aa4.4□□□□□ -1.7
SIR1YKR101W CAT8P39113 1433 aa4.4□□□□□ -1.7
SIR1YKR101W BNI1P41832 1953 aa4.4□□□□□ -1.7
SIR1YKR101W YSC83P32792 385 aa4.4□□□□□ -1.71
SIR1YKR101W MSG5P38590 489 aa4.4□□□□□ -1.71
SIR1YKR101W OSH3P38713 996 aaKnown RBP4.4□□□□□ -1.71
SIR1YKR101W YPS6P40583 537 aa4.4□□□□□ -1.71
SIR1YKR101W PIB2P53191 635 aa4.4□□□□□ -1.71
SIR1YKR101W RPL15BP54780 204 aaPredicted RBP4.4□□□□□ -1.71
SIR1YKR101W RTC5Q12108 567 aaKnown RBP4.4□□□□□ -1.71
SIR1YKR101W CRC1Q12289 327 aa4.4□□□□□ -1.71
SIR1YKR101W PDR15Q04182 1529 aaKnown RBP4.39□□□□□ -1.71
SIR1YKR101W ILV5P06168 395 aaKnown RBP4.39□□□□□ -1.71
SIR1YKR101W AMD1P15274 810 aaKnown RBP4.39□□□□□ -1.71
SIR1YKR101W RPI1P23250 407 aaKnown RBP4.39□□□□□ -1.71
SIR1YKR101W YCR007CP25354 239 aa4.39□□□□□ -1.71
SIR1YKR101W ILV6P25605 309 aaKnown RBP4.39□□□□□ -1.71
SIR1YKR101W SMY1P32364 656 aaKnown RBP4.39□□□□□ -1.71
SIR1YKR101W FRE1P32791 686 aa4.39□□□□□ -1.71
SIR1YKR101W SRB2P34162 210 aa4.39□□□□□ -1.71
SIR1YKR101W YPK3P38070 525 aa4.39□□□□□ -1.71
SIR1YKR101W QDR3P38227 689 aa4.39□□□□□ -1.71
SIR1YKR101W TOM71P38825 639 aaKnown RBP4.39□□□□□ -1.71
SIR1YKR101W GIP3Q03016 1276 aa4.39□□□□□ -1.71
SIR1YKR101W YDR541CQ03049 344 aa4.39□□□□□ -1.71
SIR1YKR101W MGR3Q04472 501 aa4.39□□□□□ -1.71
SIR1YKR101W GLO2Q05584 274 aa4.39□□□□□ -1.71
SIR1YKR101W IQG1Q12280 1495 aa4.39□□□□□ -1.71
SIR1YKR101W REC114P32841 428 aa4.38□□□□□ -1.71
SIR1YKR101W PTK1P36002 662 aaPredicted RBP4.38□□□□□ -1.71
SIR1YKR101W MPS2P53159 387 aa4.38□□□□□ -1.71
SIR1YKR101W PCP1P53259 346 aa4.38□□□□□ -1.71
SIR1YKR101W SAM50P53969 484 aa4.38□□□□□ -1.71
SIR1YKR101W ORM2Q06144 216 aa4.38□□□□□ -1.71
SIR1YKR101W GSH2Q08220 491 aa4.38□□□□□ -1.71
SIR1YKR101W NRT1Q08485 598 aa4.38□□□□□ -1.71
SIR1YKR101W YOR012WQ12351 137 aa4.38□□□□□ -1.71
SIR1YKR101W CHS1P08004 1131 aa4.38□□□□□ -1.71
SIR1YKR101W IMA3P0CW40 589 aa4.38□□□□□ -1.71
SIR1YKR101W IMA4P0CW41 589 aa4.38□□□□□ -1.71
SIR1YKR101W RDS1P25611 832 aa4.38□□□□□ -1.71
SIR1YKR101W APE2P32454 952 aaKnown RBP4.38□□□□□ -1.71
SIR1YKR101W ECM25P32525 599 aa4.38□□□□□ -1.71
SIR1YKR101W OLA1P38219 394 aaKnown RBP4.38□□□□□ -1.71
SIR1YKR101W SPP381P38282 291 aaPredicted RBP4.38□□□□□ -1.71
SIR1YKR101W YHR177WP38867 453 aa4.38□□□□□ -1.71
SIR1YKR101W DSL1P53847 754 aa4.38□□□□□ -1.71
SIR1YKR101W ERV25P54837 211 aaKnown RBP4.38□□□□□ -1.71
SIR1YKR101W MSS11Q03825 758 aa4.38□□□□□ -1.71
SIR1YKR101W IPK1Q06667 281 aa4.38□□□□□ -1.71
SIR1YKR101W IMA2Q08295 589 aa4.38□□□□□ -1.71
SIR1YKR101W RRP36Q12481 300 aaPredicted RBP4.38□□□□□ -1.71
SIR1YKR101W BUD3P25558 1636 aa4.38□□□□□ -1.71
SIR1YKR101W PGK1P00560 416 aaKnown RBP4.37□□□□□ -1.71
SIR1YKR101W RPC40P07703 335 aaKnown RBP4.37□□□□□ -1.71
SIR1YKR101W DBP3P20447 523 aaKnown RBP4.37□□□□□ -1.71
SIR1YKR101W SAG1P20840 650 aa4.37□□□□□ -1.71
SIR1YKR101W CTR86P25355 563 aa4.37□□□□□ -1.71
SIR1YKR101W ACH1P32316 526 aa4.37□□□□□ -1.71
SIR1YKR101W NDI1P32340 513 aa4.37□□□□□ -1.71
SIR1YKR101W NRP1P32770 719 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
SIR1YKR101W CBP4P37267 147 aa4.37□□□□□ -1.71
SIR1YKR101W RTT107P38850 1070 aa4.37□□□□□ -1.71
SIR1YKR101W YDR089WP38966 869 aa4.37□□□□□ -1.71
SIR1YKR101W VPS52P39904 641 aa4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms