RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C DHR2P36009 735 aaPredicted RBP6.78□□□□□ -1.32
PUP2YGR253C MUD2P36084 527 aaKnown RBP6.78□□□□□ -1.32
PUP2YGR253C OAF1P39720 1047 aaPredicted RBP6.78□□□□□ -1.32
PUP2YGR253C COS4P43542 379 aa6.78□□□□□ -1.32
PUP2YGR253C MDV1P47025 714 aa6.78□□□□□ -1.32
PUP2YGR253C YJR039WP47107 1121 aa6.78□□□□□ -1.32
PUP2YGR253C YJR141WP47172 347 aaPredicted RBP6.78□□□□□ -1.32
PUP2YGR253C GTR2P53290 341 aa6.78□□□□□ -1.32
PUP2YGR253C PBP1P53297 722 aaKnown RBP6.78□□□□□ -1.32
PUP2YGR253C SKI8Q02793 397 aaPredicted RBP6.78□□□□□ -1.32
PUP2YGR253C YEH1Q07804 573 aa6.78□□□□□ -1.32
PUP2YGR253C VHS3Q08438 674 aa6.78□□□□□ -1.32
PUP2YGR253C YOR019WQ99248 730 aa6.78□□□□□ -1.32
PUP2YGR253C DST1P07273 309 aa6.77□□□□□ -1.33
PUP2YGR253C DOA1P36037 715 aa6.77□□□□□ -1.33
PUP2YGR253C APE4P38821 490 aa6.77□□□□□ -1.33
PUP2YGR253C ARB1P40024 610 aaKnown RBP6.77□□□□□ -1.33
PUP2YGR253C TED1P40533 473 aa6.77□□□□□ -1.33
PUP2YGR253C MEP2P41948 499 aa6.77□□□□□ -1.33
PUP2YGR253C ALB1P47019 175 aaPredicted RBP6.77□□□□□ -1.33
PUP2YGR253C URB2P47108 1174 aa6.77□□□□□ -1.33
PUP2YGR253C BPL1P48445 690 aaPredicted RBP6.77□□□□□ -1.33
PUP2YGR253C YDR541CQ03049 344 aa6.77□□□□□ -1.33
PUP2YGR253C ISR1Q06098 443 aaKnown RBP6.77□□□□□ -1.33
PUP2YGR253C YOR223WQ12015 292 aa6.77□□□□□ -1.33
PUP2YGR253C MLH3Q12083 715 aa6.77□□□□□ -1.33
PUP2YGR253C PRT1P06103 763 aaKnown RBP6.76□□□□□ -1.33
PUP2YGR253C HSC82P15108 705 aaKnown RBP6.76□□□□□ -1.33
PUP2YGR253C DAP2P18962 818 aa6.76□□□□□ -1.33
PUP2YGR253C SLM5P25345 492 aaKnown RBP6.76□□□□□ -1.33
PUP2YGR253C ARE1P25628 610 aa6.76□□□□□ -1.33
PUP2YGR253C KRE6P32486 720 aa6.76□□□□□ -1.33
PUP2YGR253C PTR2P32901 601 aa6.76□□□□□ -1.33
PUP2YGR253C BET3P36149 193 aa6.76□□□□□ -1.33
PUP2YGR253C YCR087C-AP37263 153 aa6.76□□□□□ -1.33
PUP2YGR253C MNN2P38069 597 aa6.76□□□□□ -1.33
PUP2YGR253C ATG7P38862 630 aa6.76□□□□□ -1.33
PUP2YGR253C YDR089WP38966 869 aa6.76□□□□□ -1.33
PUP2YGR253C GIP2P40036 548 aa6.76□□□□□ -1.33
PUP2YGR253C UBP6P43593 499 aaKnown RBP6.76□□□□□ -1.33
PUP2YGR253C ECO1P43605 281 aa6.76□□□□□ -1.33
PUP2YGR253C ATP22P50273 684 aaPredicted RBP6.76□□□□□ -1.33
PUP2YGR253C VPS60Q03390 229 aa6.76□□□□□ -1.33
PUP2YGR253C CGI121Q03705 181 aaKnown RBP6.76□□□□□ -1.33
PUP2YGR253C YOL019WQ08157 551 aa6.76□□□□□ -1.33
PUP2YGR253C GET4Q12125 312 aa6.76□□□□□ -1.33
PUP2YGR253C RHO2P06781 192 aa6.75□□□□□ -1.33
PUP2YGR253C RPO26P20435 155 aa6.75□□□□□ -1.33
PUP2YGR253C GPI12P23797 304 aa6.75□□□□□ -1.33
PUP2YGR253C MSN2P33748 704 aa6.75□□□□□ -1.33
PUP2YGR253C SPO23P33757 523 aa6.75□□□□□ -1.33
PUP2YGR253C SET3P36124 751 aa6.75□□□□□ -1.33
PUP2YGR253C RIM2P38127 377 aa6.75□□□□□ -1.33
PUP2YGR253C YBR062CP38239 180 aa6.75□□□□□ -1.33
PUP2YGR253C GRE3P38715 327 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
PUP2YGR253C MET18P40469 1032 aa6.75□□□□□ -1.33
PUP2YGR253C CIN1P40987 1014 aa6.75□□□□□ -1.33
PUP2YGR253C FMP32P43557 207 aa6.75□□□□□ -1.33
PUP2YGR253C FAR3P46671 204 aa6.75□□□□□ -1.33
PUP2YGR253C RCF2P53721 224 aa6.75□□□□□ -1.33
PUP2YGR253C PDR16P53860 351 aaKnown RBP6.75□□□□□ -1.33
PUP2YGR253C SLM2P53955 656 aa6.75□□□□□ -1.33
PUP2YGR253C USA1Q03714 838 aa6.75□□□□□ -1.33
PUP2YGR253C YMR111CQ04461 462 aaPredicted RBP6.75□□□□□ -1.33
PUP2YGR253C YLR352WQ06479 807 aa6.75□□□□□ -1.33
PUP2YGR253C ESA1Q08649 445 aa6.75□□□□□ -1.33
PUP2YGR253C NTO1Q12311 748 aa6.75□□□□□ -1.33
PUP2YGR253C CDC39P25655 2108 aaKnown RBP6.74□□□□□ -1.33
PUP2YGR253C SEC16P48415 2195 aaKnown RBP6.74□□□□□ -1.33
PUP2YGR253C PBS2P08018 668 aa6.74□□□□□ -1.33
PUP2YGR253C PET111P08468 800 aa6.74□□□□□ -1.33
PUP2YGR253C RPL20AP0CX23 172 aaKnown RBP6.74□□□□□ -1.33
PUP2YGR253C RPL20BP0CX24 172 aaPredicted RBP6.74□□□□□ -1.33
PUP2YGR253C SRV2P17555 526 aaKnown RBP6.74□□□□□ -1.33
PUP2YGR253C ERG8P24521 451 aa6.74□□□□□ -1.33
PUP2YGR253C OCA4P25366 362 aa6.74□□□□□ -1.33
PUP2YGR253C BUB2P26448 306 aaPredicted RBP6.74□□□□□ -1.33
PUP2YGR253C VPS51P36116 164 aa6.74□□□□□ -1.33
PUP2YGR253C AIM22P47051 409 aa6.74□□□□□ -1.33
PUP2YGR253C YJL043WP47053 257 aa6.74□□□□□ -1.33
PUP2YGR253C EMC2P47133 292 aaKnown RBP6.74□□□□□ -1.33
PUP2YGR253C MUP1P50276 574 aa6.74□□□□□ -1.33
PUP2YGR253C TMA46Q12000 345 aaKnown RBP6.74□□□□□ -1.33
PUP2YGR253C YTM1Q12024 460 aaPredicted RBP6.74□□□□□ -1.33
PUP2YGR253C SYP1P25623 870 aaKnown RBP6.73□□□□□ -1.33
PUP2YGR253C NFU1P32860 256 aa6.73□□□□□ -1.33
PUP2YGR253C COS111P38308 924 aa6.73□□□□□ -1.33
PUP2YGR253C SCS2P40075 244 aaKnown RBP6.73□□□□□ -1.33
PUP2YGR253C PKP1P40530 394 aa6.73□□□□□ -1.33
PUP2YGR253C APS3P47064 194 aa6.73□□□□□ -1.33
PUP2YGR253C ATP25Q03153 612 aa6.73□□□□□ -1.33
PUP2YGR253C YPR172WQ06608 200 aa6.73□□□□□ -1.33
PUP2YGR253C YOR365CQ08844 703 aa6.73□□□□□ -1.33
PUP2YGR253C CBS2P14905 389 aa6.72□□□□□ -1.33
PUP2YGR253C ILV6P25605 309 aaKnown RBP6.72□□□□□ -1.33
PUP2YGR253C FES1P38260 290 aa6.72□□□□□ -1.33
PUP2YGR253C TRR2P38816 342 aa6.72□□□□□ -1.33
PUP2YGR253C TOK1P40310 691 aa6.72□□□□□ -1.33
PUP2YGR253C LIA1P47120 325 aaKnown RBP6.72□□□□□ -1.33
PUP2YGR253C ARI1P53111 347 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 96.6 ms