RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W TOD6P34219 525 aa6.29□□□□□ -1.4
SNU71YGR013W OLA1P38219 394 aaKnown RBP6.29□□□□□ -1.4
SNU71YGR013W SPP381P38282 291 aaPredicted RBP6.29□□□□□ -1.4
SNU71YGR013W EFM2P38347 419 aa6.29□□□□□ -1.4
SNU71YGR013W YPR172WQ06608 200 aa6.29□□□□□ -1.4
SNU71YGR013W THI3Q07471 609 aa6.29□□□□□ -1.4
SNU71YGR013W PUF2Q12221 1075 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
SNU71YGR013W NFT1P0CE68 1218 aa6.28□□□□□ -1.4
SNU71YGR013W ERG11P10614 530 aa6.28□□□□□ -1.4
SNU71YGR013W PSO2P30620 661 aa6.28□□□□□ -1.4
SNU71YGR013W PRP21P32524 280 aaPredicted RBP6.28□□□□□ -1.4
SNU71YGR013W LIP5P32875 414 aa6.28□□□□□ -1.4
SNU71YGR013W BRO1P48582 844 aa6.28□□□□□ -1.4
SNU71YGR013W YGL185CP53100 379 aa6.28□□□□□ -1.4
SNU71YGR013W ZPR1P53303 486 aaKnown RBP6.28□□□□□ -1.4
SNU71YGR013W MPP6P53725 186 aaPredicted RBP6.28□□□□□ -1.4
SNU71YGR013W CPR8P53728 308 aa6.28□□□□□ -1.4
SNU71YGR013W SUT2Q12286 268 aa6.28□□□□□ -1.4
SNU71YGR013W MLP1Q02455 1875 aaKnown RBP6.28□□□□□ -1.4
SNU71YGR013W YRF1-2P40105 1681 aa6.28□□□□□ -1.4
SNU71YGR013W CLB2P24869 491 aa6.28□□□□□ -1.4
SNU71YGR013W YSC83P32792 385 aa6.28□□□□□ -1.4
SNU71YGR013W COT1P32798 439 aa6.28□□□□□ -1.4
SNU71YGR013W SOR1P35497 357 aaKnown RBP6.28□□□□□ -1.4
SNU71YGR013W MIA40P36046 403 aa6.28□□□□□ -1.4
SNU71YGR013W BNA4P38169 460 aa6.28□□□□□ -1.4
SNU71YGR013W DED81P38707 554 aaKnown RBP6.28□□□□□ -1.4
SNU71YGR013W PCL5P38794 229 aa6.28□□□□□ -1.4
SNU71YGR013W END3P39013 349 aa6.28□□□□□ -1.4
SNU71YGR013W SNG1P46950 547 aa6.28□□□□□ -1.4
SNU71YGR013W PHO23P50947 330 aa6.28□□□□□ -1.4
SNU71YGR013W SPO19Q03029 223 aa6.28□□□□□ -1.4
SNU71YGR013W ATG26Q06321 1198 aa6.28□□□□□ -1.4
SNU71YGR013W SOR2Q07786 357 aa6.28□□□□□ -1.4
SNU71YGR013W YOR365CQ08844 703 aa6.28□□□□□ -1.4
SNU71YGR013W RNR2P09938 399 aaKnown RBP6.27□□□□□ -1.41
SNU71YGR013W UGA1P17649 471 aa6.27□□□□□ -1.41
SNU71YGR013W HRR25P29295 494 aaKnown RBP6.27□□□□□ -1.41
SNU71YGR013W RPC34P32910 317 aa6.27□□□□□ -1.41
SNU71YGR013W MSN2P33748 704 aa6.27□□□□□ -1.41
SNU71YGR013W RRN10P38204 145 aa6.27□□□□□ -1.41
SNU71YGR013W QDR3P38227 689 aa6.27□□□□□ -1.41
SNU71YGR013W SWC5P38326 303 aa6.27□□□□□ -1.41
SNU71YGR013W ERG7P38604 731 aa6.27□□□□□ -1.41
SNU71YGR013W RRP4P38792 359 aaKnown RBP6.27□□□□□ -1.41
SNU71YGR013W TOM71P38825 639 aaKnown RBP6.27□□□□□ -1.41
SNU71YGR013W SPC97P38863 823 aa6.27□□□□□ -1.41
SNU71YGR013W LIA1P47120 325 aaKnown RBP6.27□□□□□ -1.41
SNU71YGR013W ECL1P48235 211 aa6.27□□□□□ -1.41
SNU71YGR013W LYS20P48570 428 aaKnown RBP6.27□□□□□ -1.41
SNU71YGR013W SEG1Q04279 960 aa6.27□□□□□ -1.41
SNU71YGR013W CSI1Q04368 295 aa6.27□□□□□ -1.41
SNU71YGR013W CDA2Q06703 312 aa6.27□□□□□ -1.41
SNU71YGR013W YLR049CQ12110 428 aa6.27□□□□□ -1.41
SNU71YGR013W LDB17Q12342 491 aa6.27□□□□□ -1.41
SNU71YGR013W ECM25P32525 599 aa6.26□□□□□ -1.41
SNU71YGR013W NRP1P32770 719 aaKnown RBP RIP-Chip data6.26□□□□□ -1.41not detected
SNU71YGR013W SUL1P38359 859 aa6.26□□□□□ -1.41
SNU71YGR013W PEX18P38855 283 aa6.26□□□□□ -1.41
SNU71YGR013W CCT2P39076 527 aaKnown RBP6.26□□□□□ -1.41
SNU71YGR013W YHC3P47040 408 aa6.26□□□□□ -1.41
SNU71YGR013W RIB4P50861 169 aaPredicted RBP6.26□□□□□ -1.41
SNU71YGR013W DBP6P53734 629 aaKnown RBP6.26□□□□□ -1.41
SNU71YGR013W TY4B-HP0C2J7 1802 aa6.26□□□□□ -1.41
SNU71YGR013W TY4B-JP47024 1803 aa6.26□□□□□ -1.41
SNU71YGR013W RPL7AP05737 244 aaKnown RBP6.26□□□□□ -1.41
SNU71YGR013W RAD52P06778 471 aaKnown RBP6.26□□□□□ -1.41
SNU71YGR013W GPA1P08539 472 aa6.26□□□□□ -1.41
SNU71YGR013W NUP1P20676 1076 aa6.26□□□□□ -1.41
SNU71YGR013W HSP104P31539 908 aaKnown RBP6.26□□□□□ -1.41
SNU71YGR013W ATP11P32453 318 aa6.26□□□□□ -1.41
SNU71YGR013W KAP104P38217 918 aaKnown RBP6.26□□□□□ -1.41
SNU71YGR013W UBA4P38820 440 aa6.26□□□□□ -1.41
SNU71YGR013W YHR177WP38867 453 aa6.26□□□□□ -1.41
SNU71YGR013W GAT2P40209 560 aa6.26□□□□□ -1.41
SNU71YGR013W SYG1P40528 902 aa6.26□□□□□ -1.41
SNU71YGR013W GTO1P48239 356 aa6.26□□□□□ -1.41
SNU71YGR013W MND1P53102 219 aa6.26□□□□□ -1.41
SNU71YGR013W DUG3P53871 357 aa6.26□□□□□ -1.41
SNU71YGR013W CAB5Q03941 241 aa6.26□□□□□ -1.41
SNU71YGR013W AIM39Q08223 395 aa6.26□□□□□ -1.41
SNU71YGR013W RPL7BQ12213 244 aaKnown RBP6.26□□□□□ -1.41
SNU71YGR013W PKH2Q12236 1081 aaKnown RBP6.26□□□□□ -1.41
SNU71YGR013W THR4P16120 514 aaKnown RBP6.25□□□□□ -1.41
SNU71YGR013W PMA2P19657 947 aa6.25□□□□□ -1.41
SNU71YGR013W RAD51P25454 400 aa6.25□□□□□ -1.41
SNU71YGR013W ERV46P39727 415 aa6.25□□□□□ -1.41
SNU71YGR013W SAS2P40963 338 aa6.25□□□□□ -1.41
SNU71YGR013W YGL114WP53134 725 aa6.25□□□□□ -1.41
SNU71YGR013W EAF7P53911 425 aaKnown RBP6.25□□□□□ -1.41
SNU71YGR013W ERV41Q04651 352 aa6.25□□□□□ -1.41
SNU71YGR013W VAC14Q06708 880 aa6.25□□□□□ -1.41
SNU71YGR013W NSE1Q07913 336 aa6.25□□□□□ -1.41
SNU71YGR013W GEP3Q08622 556 aa6.25□□□□□ -1.41
SNU71YGR013W SNF3P10870 884 aa6.24□□□□□ -1.41
SNU71YGR013W YCR006CP25350 157 aa6.24□□□□□ -1.41
SNU71YGR013W SPS22P25380 463 aa6.24□□□□□ -1.41
SNU71YGR013W YCL068CP25593 260 aa6.24□□□□□ -1.41
SNU71YGR013W DEP1P31385 405 aa6.24□□□□□ -1.41
SNU71YGR013W YKT6P36015 200 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms