RNA–Protein interactions for RNA: YGL098W

USE1, Transcript of Essential SNARE protein localized to the ER, yeastyeast

Gene USE1, Length 738 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USE1YGL098W SAC7P17121 654 aa3.16□□□□□ -1.9
USE1YGL098W AMD2P22580 549 aa3.16□□□□□ -1.9
USE1YGL098W RNA15P25299 296 aaPredicted RBP3.16□□□□□ -1.9
USE1YGL098W PUP3P25451 205 aaKnown RBP3.16□□□□□ -1.9
USE1YGL098W YIM1P28625 365 aa3.16□□□□□ -1.9
USE1YGL098W CHS3P29465 1165 aa3.16□□□□□ -1.9
USE1YGL098W RNP1P32385 249 aa3.16□□□□□ -1.9
USE1YGL098W VPS17P32913 551 aa3.16□□□□□ -1.9
USE1YGL098W MDL2P33311 773 aa3.16□□□□□ -1.9
USE1YGL098W LST4P34239 828 aa3.16□□□□□ -1.9
USE1YGL098W YKL077WP36081 392 aa3.16□□□□□ -1.9
USE1YGL098W MRPL7P36519 292 aa3.16□□□□□ -1.9
USE1YGL098W MRPL15P36523 253 aa3.16□□□□□ -1.9
USE1YGL098W MRPL36P36531 177 aa3.16□□□□□ -1.9
USE1YGL098W SHM2P37291 469 aaKnown RBP3.16□□□□□ -1.9
USE1YGL098W MAL32P38158 584 aa3.16□□□□□ -1.9
USE1YGL098W MBA1P38300 278 aa3.16□□□□□ -1.9
USE1YGL098W SUL1P38359 859 aa3.16□□□□□ -1.9
USE1YGL098W RRP4P38792 359 aaKnown RBP3.16□□□□□ -1.9
USE1YGL098W PPE1P38796 400 aa3.16□□□□□ -1.9
USE1YGL098W PTC7P38797 343 aa3.16□□□□□ -1.9
USE1YGL098W IKI1P38874 309 aa3.16□□□□□ -1.9
USE1YGL098W AVT2P39981 480 aa3.16□□□□□ -1.9
USE1YGL098W SCC4P40090 624 aa3.16□□□□□ -1.9
USE1YGL098W QDR1P40475 563 aa3.16□□□□□ -1.9
USE1YGL098W HIS6P40545 261 aa3.16□□□□□ -1.9
USE1YGL098W IDP2P41939 412 aa3.16□□□□□ -1.9
USE1YGL098W GSM1P42950 618 aa3.16□□□□□ -1.9
USE1YGL098W DUG1P43616 481 aaKnown RBP3.16□□□□□ -1.9
USE1YGL098W ADO1P47143 340 aaKnown RBP3.16□□□□□ -1.9
USE1YGL098W ABM1P47146 123 aa3.16□□□□□ -1.9
USE1YGL098W THI11P47183 340 aa3.16□□□□□ -1.9
USE1YGL098W FOL2P51601 243 aaKnown RBP3.16□□□□□ -1.9
USE1YGL098W YGL117WP53133 265 aa3.16□□□□□ -1.9
USE1YGL098W MRH4P53166 561 aa3.16□□□□□ -1.9
USE1YGL098W MAL12P53341 584 aa3.16□□□□□ -1.9
USE1YGL098W HDA1P53973 706 aa3.16□□□□□ -1.9
USE1YGL098W ARK1P53974 638 aa3.16□□□□□ -1.9
USE1YGL098W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
USE1YGL098W MTD1Q02046 320 aaKnown RBP3.16□□□□□ -1.9
USE1YGL098W NUP49Q02199 472 aa3.16□□□□□ -1.9
USE1YGL098W MRPS16Q02608 121 aa3.16□□□□□ -1.9
USE1YGL098W UGO1Q03327 502 aa3.16□□□□□ -1.9
USE1YGL098W TRM12Q04235 462 aa3.16□□□□□ -1.9
USE1YGL098W PLM2Q04383 521 aa3.16□□□□□ -1.9
USE1YGL098W HOF1Q05080 669 aa3.16□□□□□ -1.9
USE1YGL098W CIA1Q05583 330 aa3.16□□□□□ -1.9
USE1YGL098W YDR278CQ05612 105 aa3.16□□□□□ -1.9
USE1YGL098W GPN3Q06543 272 aa3.16□□□□□ -1.9
USE1YGL098W HDA2Q06629 674 aa3.16□□□□□ -1.9
USE1YGL098W REH1Q06709 432 aa3.16□□□□□ -1.9
USE1YGL098W THI3Q07471 609 aa3.16□□□□□ -1.9
USE1YGL098W PEX27Q08580 376 aa3.16□□□□□ -1.9
USE1YGL098W MSC6Q08818 692 aaKnown RBP3.16□□□□□ -1.9
USE1YGL098W FRE3Q08905 711 aa3.16□□□□□ -1.9
USE1YGL098W AKR2Q12013 749 aa3.16□□□□□ -1.9
USE1YGL098W YDR018CQ12185 396 aa3.16□□□□□ -1.9
USE1YGL098W YOR022CQ12204 715 aa3.16□□□□□ -1.9
USE1YGL098W PKH2Q12236 1081 aaKnown RBP3.16□□□□□ -1.9
USE1YGL098W YLR122CQ12312 125 aa3.16□□□□□ -1.9
USE1YGL098W KCS1Q12494 1050 aa3.16□□□□□ -1.9
USE1YGL098W RGS2Q99188 309 aa3.16□□□□□ -1.9
USE1YGL098W THP2O13539 261 aaKnown RBP3.15□□□□□ -1.91
USE1YGL098W ARG81P05085 880 aa3.15□□□□□ -1.91
USE1YGL098W KIN28P06242 306 aa3.15□□□□□ -1.91
USE1YGL098W CDC7P06243 507 aa3.15□□□□□ -1.91
USE1YGL098W RAD52P06778 471 aaKnown RBP3.15□□□□□ -1.91
USE1YGL098W RHO2P06781 192 aa3.15□□□□□ -1.91
USE1YGL098W HIS5P07172 385 aa3.15□□□□□ -1.91
USE1YGL098W ATP1P07251 545 aaKnown RBP3.15□□□□□ -1.91
USE1YGL098W SPE1P08432 466 aa3.15□□□□□ -1.91
USE1YGL098W YFR010W-AP0C5N0 62 aa3.15□□□□□ -1.91
USE1YGL098W CHS2P14180 963 aa3.15□□□□□ -1.91
USE1YGL098W EST1P17214 699 aaPredicted RBP3.15□□□□□ -1.91
USE1YGL098W MAG1P22134 296 aaKnown RBP3.15□□□□□ -1.91
USE1YGL098W SLY1P22213 666 aa3.15□□□□□ -1.91
USE1YGL098W DCC1P25559 380 aa3.15□□□□□ -1.91
USE1YGL098W POF1P25576 258 aa3.15□□□□□ -1.91
USE1YGL098W ERG9P29704 444 aa3.15□□□□□ -1.91
USE1YGL098W LDS1P31379 325 aa3.15□□□□□ -1.91
USE1YGL098W MCM10P32354 571 aa3.15□□□□□ -1.91
USE1YGL098W PHA2P32452 334 aa3.15□□□□□ -1.91
USE1YGL098W SCM4P32564 187 aa3.15□□□□□ -1.91
USE1YGL098W SFA1P32771 386 aa3.15□□□□□ -1.91
USE1YGL098W SUI1P32911 108 aaKnown RBP3.15□□□□□ -1.91
USE1YGL098W AIM29P36154 155 aa3.15□□□□□ -1.91
USE1YGL098W RPF2P36160 344 aaKnown RBP3.15□□□□□ -1.91
USE1YGL098W APT2P36973 181 aa3.15□□□□□ -1.91
USE1YGL098W IST2P38250 946 aa3.15□□□□□ -1.91
USE1YGL098W LAG1P38703 411 aa3.15□□□□□ -1.91
USE1YGL098W CRP1P38845 465 aaKnown RBP3.15□□□□□ -1.91
USE1YGL098W YAP1801P38856 637 aa3.15□□□□□ -1.91
USE1YGL098W AIM18P38884 321 aa3.15□□□□□ -1.91
USE1YGL098W RGI2P40188 164 aa3.15□□□□□ -1.91
USE1YGL098W IMA5P40884 581 aa3.15□□□□□ -1.91
USE1YGL098W PSA1P41940 361 aaKnown RBP3.15□□□□□ -1.91
USE1YGL098W YGR201CP42936 225 aa3.15□□□□□ -1.91
USE1YGL098W ASG7P46993 209 aa3.15□□□□□ -1.91
USE1YGL098W RPA34P47006 233 aaPredicted RBP3.15□□□□□ -1.91
USE1YGL098W CCC1P47818 322 aa3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms