RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeastyeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHD1YER164W HER2Q03557 464 aa3.64□□□□□ -1.83
CHD1YER164W NRT1Q08485 598 aa3.64□□□□□ -1.83
CHD1YER164W TOP3P13099 656 aa3.64□□□□□ -1.83
CHD1YER164W CHA1P25379 360 aaKnown RBP3.64□□□□□ -1.83
CHD1YER164W AAR2P32357 355 aaPredicted RBP3.64□□□□□ -1.83
CHD1YER164W ARP2P32381 391 aaKnown RBP3.64□□□□□ -1.83
CHD1YER164W PDC2P32896 925 aa3.64□□□□□ -1.83
CHD1YER164W TUL1P36096 758 aa3.64□□□□□ -1.83
CHD1YER164W MRPL17P36528 281 aa3.64□□□□□ -1.83
CHD1YER164W MRP21P38175 177 aa3.64□□□□□ -1.83
CHD1YER164W ARN2P38724 620 aa3.64□□□□□ -1.83
CHD1YER164W LRP1P38801 184 aaKnown RBP3.64□□□□□ -1.83
CHD1YER164W FAD1P38913 306 aa3.64□□□□□ -1.83
CHD1YER164W TES1P41903 349 aaKnown RBP3.64□□□□□ -1.83
CHD1YER164W SNG1P46950 547 aa3.64□□□□□ -1.83
CHD1YER164W YJL016WP47072 561 aa3.64□□□□□ -1.83
CHD1YER164W CLD1P53264 445 aa3.64□□□□□ -1.83
CHD1YER164W ATF2P53296 535 aa3.64□□□□□ -1.83
CHD1YER164W PRM15Q03262 622 aa3.64□□□□□ -1.83
CHD1YER164W NGL2Q03264 515 aaKnown RBP3.64□□□□□ -1.83
CHD1YER164W YMR034CQ05131 434 aaPredicted RBP3.64□□□□□ -1.83
CHD1YER164W VID22Q05934 901 aa3.64□□□□□ -1.83
CHD1YER164W APC5Q08683 685 aa3.64□□□□□ -1.83
CHD1YER164W FRE5Q08908 694 aa3.64□□□□□ -1.83
CHD1YER164W ENA1P13587 1091 aa3.64□□□□□ -1.83
CHD1YER164W RNA14P25298 677 aaKnown RBP3.64□□□□□ -1.83
CHD1YER164W PET127P32606 800 aa3.64□□□□□ -1.83
CHD1YER164W SKT5P34226 696 aa3.64□□□□□ -1.83
CHD1YER164W RIB5P38145 238 aa3.64□□□□□ -1.83
CHD1YER164W YHL041WP38730 149 aa3.64□□□□□ -1.83
CHD1YER164W GIC1P38785 314 aa3.64□□□□□ -1.83
CHD1YER164W SLM1P40485 686 aa3.64□□□□□ -1.83
CHD1YER164W YIR007WP40566 764 aa3.64□□□□□ -1.83
CHD1YER164W PMT3P47190 753 aa3.64□□□□□ -1.83
CHD1YER164W PAC10P48363 199 aa3.64□□□□□ -1.83
CHD1YER164W ARG5,6Q01217 863 aa3.64□□□□□ -1.83
CHD1YER164W ENA2Q01896 1091 aa3.64□□□□□ -1.83
CHD1YER164W SPC19Q03954 165 aa3.64□□□□□ -1.83
CHD1YER164W LDB18Q07887 179 aa3.64□□□□□ -1.83
CHD1YER164W SFG1Q12507 346 aa3.64□□□□□ -1.83
CHD1YER164W ENA5Q12691 1091 aa3.64□□□□□ -1.83
CHD1YER164W GAL4P04386 881 aa3.63□□□□□ -1.83
CHD1YER164W RHO1P06780 209 aaKnown RBP3.63□□□□□ -1.83
CHD1YER164W CBS2P14905 389 aa3.63□□□□□ -1.83
CHD1YER164W MET22P32179 357 aa3.63□□□□□ -1.83
CHD1YER164W VAM7P32912 316 aa3.63□□□□□ -1.83
CHD1YER164W ATG12P38316 186 aa3.63□□□□□ -1.83
CHD1YER164W HSE1P38753 452 aa3.63□□□□□ -1.83
CHD1YER164W COQ6P53318 479 aa3.63□□□□□ -1.83
CHD1YER164W IDP3P53982 420 aaKnown RBP3.63□□□□□ -1.83
CHD1YER164W PRP38Q00723 242 aaPredicted RBP3.63□□□□□ -1.83
CHD1YER164W SMA1Q02651 245 aa3.63□□□□□ -1.83
CHD1YER164W YMR130WQ04223 302 aa3.63□□□□□ -1.83
CHD1YER164W EMI2Q04409 500 aaKnown RBP3.63□□□□□ -1.83
CHD1YER164W RIF2Q06208 395 aa3.63□□□□□ -1.83
CHD1YER164W GPI11Q06636 219 aa3.63□□□□□ -1.83
CHD1YER164W BER1Q06688 274 aaKnown RBP3.63□□□□□ -1.83
CHD1YER164W BRE4Q07660 1125 aa3.63□□□□□ -1.83
CHD1YER164W SFM1Q12314 213 aa3.63□□□□□ -1.83
CHD1YER164W STE2D6VTK4 431 aa3.63□□□□□ -1.83
CHD1YER164W STE4P18851 423 aa3.63□□□□□ -1.83
CHD1YER164W BUB2P26448 306 aaPredicted RBP3.63□□□□□ -1.83
CHD1YER164W APE2P32454 952 aaKnown RBP3.63□□□□□ -1.83
CHD1YER164W SET3P36124 751 aa3.63□□□□□ -1.83
CHD1YER164W YHR112CP38716 378 aa3.63□□□□□ -1.83
CHD1YER164W SEN34P39707 275 aa3.63□□□□□ -1.83
CHD1YER164W IDP2P41939 412 aa3.63□□□□□ -1.83
CHD1YER164W BFA1P47113 574 aa3.63□□□□□ -1.83
CHD1YER164W COG7P53195 279 aa3.63□□□□□ -1.83
CHD1YER164W YNL018CP53976 612 aa3.63□□□□□ -1.83
CHD1YER164W REH1Q06709 432 aa3.63□□□□□ -1.83
CHD1YER164W CMR1Q12510 522 aaKnown RBP3.63□□□□□ -1.83
CHD1YER164W YCL001W-BQ96VH2 84 aa3.63□□□□□ -1.83
CHD1YER164W ATP6P00854 259 aa3.63□□□□□ -1.83
CHD1YER164W HMG2P12684 1045 aa3.63□□□□□ -1.83
CHD1YER164W CDC23P16522 626 aa3.63□□□□□ -1.83
CHD1YER164W SDH2P21801 266 aa3.63□□□□□ -1.83
CHD1YER164W AFT1P22149 690 aa3.63□□□□□ -1.83
CHD1YER164W MRPL8P22353 238 aa3.63□□□□□ -1.83
CHD1YER164W PDE1P22434 369 aa3.63□□□□□ -1.83
CHD1YER164W AMD2P22580 549 aa3.63□□□□□ -1.83
CHD1YER164W PPH22P23595 377 aa3.63□□□□□ -1.83
CHD1YER164W PTM1P32857 523 aa3.63□□□□□ -1.83
CHD1YER164W GDH3P39708 457 aa3.63□□□□□ -1.83
CHD1YER164W LSB6P42951 607 aa3.63□□□□□ -1.83
CHD1YER164W FET5P43561 622 aa3.63□□□□□ -1.83
CHD1YER164W CSN12P47130 423 aa3.63□□□□□ -1.83
CHD1YER164W SPT20P50875 604 aa3.63□□□□□ -1.83
CHD1YER164W SPP2Q02521 185 aa3.63□□□□□ -1.83
CHD1YER164W YMR315WQ04869 349 aaKnown RBP3.63□□□□□ -1.83
CHD1YER164W YLR049CQ12110 428 aa3.63□□□□□ -1.83
CHD1YER164W YPR1Q12458 312 aa3.63□□□□□ -1.83
CHD1YER164W GCY1P14065 312 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
CHD1YER164W PUP1P25043 261 aa3.62□□□□□ -1.83
CHD1YER164W RBK1P25332 333 aa3.62□□□□□ -1.83
CHD1YER164W HCM1P25364 564 aa3.62□□□□□ -1.83
CHD1YER164W SPO23P33757 523 aa3.62□□□□□ -1.83
CHD1YER164W LEU5P38702 357 aa3.62□□□□□ -1.83
CHD1YER164W UTP25P40498 721 aaKnown RBP3.62□□□□□ -1.83
CHD1YER164W PSA1P41940 361 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms