RNA–Protein interactions for RNA: YER147C

SCC4, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeast

Gene SCC4, Length 1,875 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCC4	YER147C	SIR1	P21691	654 aa		11.48	□□□□□ -0.57
SCC4	YER147C	RPL24B	P24000	155 aa	Known RBP	11.48	□□□□□ -0.57
SCC4	YER147C	SLM5	P25345	492 aa	Known RBP	11.48	□□□□□ -0.57
SCC4	YER147C	RER1	P25560	188 aa		11.48	□□□□□ -0.57
SCC4	YER147C	SEA4	P38164	1038 aa		11.48	□□□□□ -0.57
SCC4	YER147C	FCY21	P40039	528 aa		11.48	□□□□□ -0.57
SCC4	YER147C	IRC6	P43615	237 aa		11.48	□□□□□ -0.57
SCC4	YER147C	HOC1	P47124	396 aa		11.48	□□□□□ -0.57
SCC4	YER147C	YMR034C	Q05131	434 aa	Predicted RBP	11.48	□□□□□ -0.57
SCC4	YER147C	FUM1	P08417	488 aa	Known RBP	11.47	□□□□□ -0.57
SCC4	YER147C	SYP1	P25623	870 aa	Known RBP	11.47	□□□□□ -0.57
SCC4	YER147C	PXA2	P34230	853 aa		11.47	□□□□□ -0.57
SCC4	YER147C	MAP2	P38174	421 aa	Known RBP	11.47	□□□□□ -0.57
SCC4	YER147C	YHR127W	P38833	243 aa	Known RBP	11.47	□□□□□ -0.57
SCC4	YER147C	LSM5	P40089	93 aa	Known RBP	11.47	□□□□□ -0.57
SCC4	YER147C	SSU1	P41930	458 aa		11.47	□□□□□ -0.57
SCC4	YER147C	BIT61	P47041	543 aa		11.47	□□□□□ -0.57
SCC4	YER147C	ATG38	Q05789	226 aa	Known RBP	11.47	□□□□□ -0.57
SCC4	YER147C	SPO77	Q06134	477 aa		11.47	□□□□□ -0.57
SCC4	YER147C	SAM4	Q08985	325 aa	Known RBP	11.47	□□□□□ -0.57
SCC4	YER147C	REV1	P12689	985 aa		11.46	□□□□□ -0.57
SCC4	YER147C	THR1	P17423	357 aa	Known RBP	11.46	□□□□□ -0.57
SCC4	YER147C	TRX3	P25372	127 aa		11.46	□□□□□ -0.57
SCC4	YER147C	GPX2	P38143	162 aa		11.46	□□□□□ -0.57
SCC4	YER147C	GIC1	P38785	314 aa		11.46	□□□□□ -0.57
SCC4	YER147C	JHD1	P40034	492 aa		11.46	□□□□□ -0.57
SCC4	YER147C	YNL181W	P53878	407 aa		11.46	□□□□□ -0.57
SCC4	YER147C	AAT1	Q01802	451 aa		11.46	□□□□□ -0.57
SCC4	YER147C	ARX1	Q03862	593 aa	Known RBP	11.46	□□□□□ -0.57
SCC4	YER147C	RNH1	Q04740	348 aa		11.46	□□□□□ -0.57
SCC4	YER147C	RRP45	Q05636	305 aa	Known RBP	11.46	□□□□□ -0.57
SCC4	YER147C	UIP4	Q08926	304 aa		11.46	□□□□□ -0.57
SCC4	YER147C	PNS1	Q12412	539 aa		11.46	□□□□□ -0.57
SCC4	YER147C	LAT1	P12695	482 aa	Known RBP	11.46	□□□□□ -0.58
SCC4	YER147C	VEL1	P53058	206 aa		11.46	□□□□□ -0.58
SCC4	YER147C	MAK3	Q03503	176 aa		11.46	□□□□□ -0.58
SCC4	YER147C	TSC13	Q99190	310 aa		11.46	□□□□□ -0.58
SCC4	YER147C	GSH1	P32477	678 aa		11.45	□□□□□ -0.58
SCC4	YER147C	MAC1	P35192	417 aa		11.45	□□□□□ -0.58
SCC4	YER147C	GMH1	P36125	273 aa		11.45	□□□□□ -0.58
SCC4	YER147C	DSF2	P38213	736 aa		11.45	□□□□□ -0.58
SCC4	YER147C	IML3	P38265	245 aa		11.45	□□□□□ -0.58
SCC4	YER147C	CEM1	P39525	442 aa		11.45	□□□□□ -0.58
SCC4	YER147C	YGR168C	P53293	376 aa		11.45	□□□□□ -0.58
SCC4	YER147C	YPL071C	Q02864	156 aa		11.45	□□□□□ -0.58
SCC4	YER147C	HEH2	Q03281	663 aa		11.45	□□□□□ -0.58
SCC4	YER147C	TSR2	Q06672	205 aa	Known RBP	11.45	□□□□□ -0.58
SCC4	YER147C	PMT1	P33775	817 aa		11.44	□□□□□ -0.58
SCC4	YER147C	CBP4	P37267	147 aa		11.44	□□□□□ -0.58
SCC4	YER147C	NDE1	P40215	560 aa		11.44	□□□□□ -0.58
SCC4	YER147C	PFA3	P42836	336 aa		11.44	□□□□□ -0.58
SCC4	YER147C	RET2	P43621	546 aa		11.44	□□□□□ -0.58
SCC4	YER147C	RTS3	P53289	263 aa		11.44	□□□□□ -0.58
SCC4	YER147C	CPR8	P53728	308 aa		11.44	□□□□□ -0.58
SCC4	YER147C	GRX3	Q03835	250 aa		11.44	□□□□□ -0.58
SCC4	YER147C	ARG7	Q04728	441 aa		11.44	□□□□□ -0.58
SCC4	YER147C	RKM1	Q08961	583 aa	Predicted RBP	11.44	□□□□□ -0.58
SCC4	YER147C	ATG29	Q12092	213 aa		11.44	□□□□□ -0.58
SCC4	YER147C	MER1	P16523	270 aa		11.44	□□□□□ -0.58
SCC4	YER147C	PHO84	P25297	587 aa	Known RBP	11.44	□□□□□ -0.58
SCC4	YER147C	RFA2	P26754	273 aa	Known RBP	11.44	□□□□□ -0.58
SCC4	YER147C	EXO84	P38261	753 aa		11.44	□□□□□ -0.58
SCC4	YER147C	SSY5	P47002	699 aa		11.44	□□□□□ -0.58
SCC4	YER147C	GCV1	P48015	400 aa		11.44	□□□□□ -0.58
SCC4	YER147C	MSE1	P48525	536 aa		11.44	□□□□□ -0.58
SCC4	YER147C	PYK2	P52489	506 aa	Known RBP	11.44	□□□□□ -0.58
SCC4	YER147C	SWF1	Q04629	336 aa		11.44	□□□□□ -0.58
SCC4	YER147C	NFI1	Q12216	726 aa		11.44	□□□□□ -0.58
SCC4	YER147C	PBS2	P08018	668 aa		11.43	□□□□□ -0.58
SCC4	YER147C	SAM35	P14693	329 aa		11.43	□□□□□ -0.58
SCC4	YER147C	IDP1	P21954	428 aa	Known RBP	11.43	□□□□□ -0.58
SCC4	YER147C	IDH2	P28241	369 aa	Known RBP	11.43	□□□□□ -0.58
SCC4	YER147C	ARO7	P32178	256 aa		11.43	□□□□□ -0.58
SCC4	YER147C	ACH1	P32316	526 aa		11.43	□□□□□ -0.58
SCC4	YER147C	STP2	P38704	541 aa		11.43	□□□□□ -0.58
SCC4	YER147C	FMP10	P40098	244 aa		11.43	□□□□□ -0.58
SCC4	YER147C	OAZ1	Q02803	292 aa		11.43	□□□□□ -0.58
SCC4	YER147C	TRM82	Q03774	444 aa		11.43	□□□□□ -0.58
SCC4	YER147C	GAD1	Q04792	585 aa		11.43	□□□□□ -0.58
SCC4	YER147C	ACF2	Q12168	779 aa		11.43	□□□□□ -0.58
SCC4	YER147C	SFM1	Q12314	213 aa		11.43	□□□□□ -0.58
SCC4	YER147C	TRM1	P15565	570 aa	Known RBP	11.42	□□□□□ -0.58
SCC4	YER147C	RRP7	P25368	297 aa	Predicted RBP	11.42	□□□□□ -0.58
SCC4	YER147C	GDH3	P39708	457 aa		11.42	□□□□□ -0.58
SCC4	YER147C	STE24	P47154	453 aa		11.42	□□□□□ -0.58
SCC4	YER147C	BIO3	P50277	480 aa		11.42	□□□□□ -0.58
SCC4	YER147C	ZRG17	P53735	605 aa		11.42	□□□□□ -0.58
SCC4	YER147C	YLR036C	Q07986	203 aa		11.42	□□□□□ -0.58
SCC4	YER147C	ALG7	P07286	448 aa		11.42	□□□□□ -0.58
SCC4	YER147C	RPC40	P07703	335 aa	Known RBP	11.42	□□□□□ -0.58
SCC4	YER147C	PET122	P10355	254 aa		11.42	□□□□□ -0.58
SCC4	YER147C	RPS1B	P23248	255 aa	Known RBP	11.42	□□□□□ -0.58
SCC4	YER147C	PTC6	P25646	442 aa		11.42	□□□□□ -0.58
SCC4	YER147C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	11.42	□□□□□ -0.58	not detected
SCC4	YER147C	LHP1	P33399	275 aa	Known RBP	11.42	□□□□□ -0.58
SCC4	YER147C	LOT5	P34234	306 aa		11.42	□□□□□ -0.58
SCC4	YER147C	BAP2	P38084	609 aa		11.42	□□□□□ -0.58
SCC4	YER147C	MUM2	P38236	366 aa		11.42	□□□□□ -0.58
SCC4	YER147C	VMA22	P38784	181 aa		11.42	□□□□□ -0.58
SCC4	YER147C	YPT35	P38815	214 aa	Known RBP	11.42	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 81.2 ms