RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C SFA1P32771 386 aa7.44□□□□□ -1.22
PUP3YER094C MNN2P38069 597 aa7.44□□□□□ -1.22
PUP3YER094C STP2P38704 541 aa7.44□□□□□ -1.22
PUP3YER094C RBG1P39729 369 aa7.44□□□□□ -1.22
PUP3YER094C DLD3P39976 496 aaKnown RBP7.44□□□□□ -1.22
PUP3YER094C FET5P43561 622 aa7.44□□□□□ -1.22
PUP3YER094C VMA10P48836 114 aaKnown RBP7.44□□□□□ -1.22
PUP3YER094C RMR1P53060 241 aa7.44□□□□□ -1.22
PUP3YER094C ROG1P53118 685 aa7.44□□□□□ -1.22
PUP3YER094C FHN1P53279 174 aa7.44□□□□□ -1.22
PUP3YER094C APC4Q04601 652 aa7.44□□□□□ -1.22
PUP3YER094C BNA5Q05979 453 aa7.44□□□□□ -1.22
PUP3YER094C ARR1Q06596 294 aa7.44□□□□□ -1.22
PUP3YER094C YPR097WQ06839 1073 aa7.44□□□□□ -1.22
PUP3YER094C PUN1Q06991 263 aa7.44□□□□□ -1.22
PUP3YER094C MEU1Q07938 337 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
PUP3YER094C XYL2Q07993 356 aa7.44□□□□□ -1.22
PUP3YER094C LEU9Q12166 604 aaKnown RBP7.44□□□□□ -1.22
PUP3YER094C YOL107WQ12239 342 aa7.44□□□□□ -1.22
PUP3YER094C RKM5Q12367 367 aa7.44□□□□□ -1.22
PUP3YER094C MHF2Q3E829 80 aa7.44□□□□□ -1.22
PUP3YER094C MDM12Q92328 271 aa7.44□□□□□ -1.22
PUP3YER094C PNO1Q99216 274 aaKnown RBP7.44□□□□□ -1.22
PUP3YER094C HTA1P04911 132 aaKnown RBP7.43□□□□□ -1.22
PUP3YER094C SUI3P09064 285 aaKnown RBP7.43□□□□□ -1.22
PUP3YER094C STE6P12866 1290 aa7.43□□□□□ -1.22
PUP3YER094C HOG1P32485 435 aa7.43□□□□□ -1.22
PUP3YER094C SPC34P36131 295 aa7.43□□□□□ -1.22
PUP3YER094C OMA1P36163 345 aa7.43□□□□□ -1.22
PUP3YER094C YHL012WP38709 493 aa7.43□□□□□ -1.22
PUP3YER094C SNL1P40548 159 aa7.43□□□□□ -1.22
PUP3YER094C MRK1P50873 501 aa7.43□□□□□ -1.22
PUP3YER094C ATG38Q05789 226 aaKnown RBP7.43□□□□□ -1.22
PUP3YER094C THP1Q08231 455 aa7.43□□□□□ -1.22
PUP3YER094C PUS9Q12069 462 aa7.43□□□□□ -1.22
PUP3YER094C RPL1AP0CX43 217 aaKnown RBP7.42□□□□□ -1.22
PUP3YER094C RPL1BP0CX44 217 aaKnown RBP7.42□□□□□ -1.22
PUP3YER094C SNF4P12904 322 aa7.42□□□□□ -1.22
PUP3YER094C FBA1P14540 359 aaKnown RBP7.42□□□□□ -1.22
PUP3YER094C CBS2P14905 389 aa7.42□□□□□ -1.22
PUP3YER094C DMC1P25453 334 aa7.42□□□□□ -1.22
PUP3YER094C MGR1P25573 417 aa7.42□□□□□ -1.22
PUP3YER094C YJU2P28320 278 aaPredicted RBP7.42□□□□□ -1.22
PUP3YER094C NTG1P31378 399 aa7.42□□□□□ -1.22
PUP3YER094C SSH4P32343 579 aa7.42□□□□□ -1.22
PUP3YER094C SRB5P32585 307 aa7.42□□□□□ -1.22
PUP3YER094C SUI1P32911 108 aaKnown RBP7.42□□□□□ -1.22
PUP3YER094C TSL1P38427 1098 aaKnown RBP7.42□□□□□ -1.22
PUP3YER094C MNL1P38888 796 aa7.42□□□□□ -1.22
PUP3YER094C PSA1P41940 361 aaKnown RBP7.42□□□□□ -1.22
PUP3YER094C RRN11Q04712 507 aa7.42□□□□□ -1.22
PUP3YER094C NDL1Q06568 189 aa7.42□□□□□ -1.22
PUP3YER094C IRC13Q08630 104 aa7.42□□□□□ -1.22
PUP3YER094C YOR342CQ12182 319 aa7.42□□□□□ -1.22
PUP3YER094C YDL199CQ12407 687 aa7.42□□□□□ -1.22
PUP3YER094C TIM9O74700 87 aa7.41□□□□□ -1.22
PUP3YER094C COR1P07256 457 aa7.41□□□□□ -1.22
PUP3YER094C GAL3P13045 520 aa7.41□□□□□ -1.22
PUP3YER094C MER1P16523 270 aa7.41□□□□□ -1.22
PUP3YER094C HOP1P20050 605 aa7.41□□□□□ -1.22
PUP3YER094C VPS33P20795 691 aa7.41□□□□□ -1.22
PUP3YER094C CTS1P29029 562 aa7.41□□□□□ -1.22
PUP3YER094C MDJ1P35191 511 aa7.41□□□□□ -1.22
PUP3YER094C MAP2P38174 421 aaKnown RBP7.41□□□□□ -1.22
PUP3YER094C SWD1P39706 426 aa7.41□□□□□ -1.22
PUP3YER094C AIM2P39721 246 aa7.41□□□□□ -1.22
PUP3YER094C RSP5P39940 809 aaKnown RBP7.41□□□□□ -1.22
PUP3YER094C YEL020CP39994 560 aa7.41□□□□□ -1.22
PUP3YER094C LYS12P40495 371 aaKnown RBP7.41□□□□□ -1.22
PUP3YER094C VHR1P40522 640 aa7.41□□□□□ -1.22
PUP3YER094C GVP36P40531 326 aaKnown RBP7.41□□□□□ -1.22
PUP3YER094C RPL10P41805 221 aaKnown RBP7.41□□□□□ -1.22
PUP3YER094C MRPS18P42847 217 aa7.41□□□□□ -1.22
PUP3YER094C ELP2P42935 788 aa7.41□□□□□ -1.22
PUP3YER094C PAC10P48363 199 aa7.41□□□□□ -1.22
PUP3YER094C BNI4P53858 892 aa7.41□□□□□ -1.22
PUP3YER094C YNL181WP53878 407 aa7.41□□□□□ -1.22
PUP3YER094C OAZ1Q02803 292 aa7.41□□□□□ -1.22
PUP3YER094C YMR226CQ05016 267 aaKnown RBP7.41□□□□□ -1.22
PUP3YER094C RRP45Q05636 305 aaKnown RBP7.41□□□□□ -1.22
PUP3YER094C STP3Q05937 343 aa7.41□□□□□ -1.22
PUP3YER094C TEN1Q07921 160 aa7.41□□□□□ -1.22
PUP3YER094C MMT2Q08970 484 aa7.41□□□□□ -1.22
PUP3YER094C WTM1Q12363 437 aaKnown RBP7.41□□□□□ -1.22
PUP3YER094C NSI1Q12457 570 aa7.41□□□□□ -1.22
PUP3YER094C NPR1P22211 790 aa7.4□□□□□ -1.22
PUP3YER094C CLB4P24871 460 aa7.4□□□□□ -1.22
PUP3YER094C TAH1P25638 111 aaPredicted RBP7.4□□□□□ -1.22
PUP3YER094C PEP12P32854 288 aa7.4□□□□□ -1.22
PUP3YER094C OAR1P35731 278 aa7.4□□□□□ -1.22
PUP3YER094C RIB1P38066 345 aa7.4□□□□□ -1.22
PUP3YER094C SCO2P38072 301 aa7.4□□□□□ -1.22
PUP3YER094C ZTA1P38230 334 aaKnown RBP7.4□□□□□ -1.22
PUP3YER094C PTC2P39966 464 aaKnown RBP7.4□□□□□ -1.22
PUP3YER094C THO1P40040 218 aaKnown RBP7.4□□□□□ -1.22
PUP3YER094C FAU1P40099 211 aa7.4□□□□□ -1.22
PUP3YER094C HOC1P47124 396 aa7.4□□□□□ -1.22
PUP3YER094C ATP22P50273 684 aaPredicted RBP7.4□□□□□ -1.22
PUP3YER094C SPR6Q01684 191 aa7.4□□□□□ -1.22
PUP3YER094C RQC1Q05468 723 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms