RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C SHG1P38337 142 aa1.05□□□□□ -2.24
VAM6YDL077C BIT2P38346 545 aa1.05□□□□□ -2.24
VAM6YDL077C DIA4P38705 446 aaPredicted RBP1.05□□□□□ -2.24
VAM6YDL077C NEM1P38757 446 aa1.05□□□□□ -2.24
VAM6YDL077C QNS1P38795 714 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C SET5P38890 526 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C IPT1P38954 527 aa1.05□□□□□ -2.24
VAM6YDL077C DUN1P39009 513 aa1.05□□□□□ -2.24
VAM6YDL077C DHH1P39517 506 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C FMP10P40098 244 aa1.05□□□□□ -2.24
VAM6YDL077C PCL7P40186 285 aa1.05□□□□□ -2.24
VAM6YDL077C HIS6P40545 261 aa1.05□□□□□ -2.24
VAM6YDL077C YIL012WP40551 113 aa1.05□□□□□ -2.24
VAM6YDL077C NSE4P43124 402 aa1.05□□□□□ -2.24
VAM6YDL077C GYP8P43570 497 aa1.05□□□□□ -2.24
VAM6YDL077C IRC18P47056 224 aa1.05□□□□□ -2.24
VAM6YDL077C MPS3P47069 682 aa1.05□□□□□ -2.24
VAM6YDL077C ALT2P52892 507 aa1.05□□□□□ -2.24
VAM6YDL077C RTA1P53047 317 aa1.05□□□□□ -2.24
VAM6YDL077C LCL3P53153 274 aa1.05□□□□□ -2.24
VAM6YDL077C NQM1P53228 333 aaPredicted RBP1.05□□□□□ -2.24
VAM6YDL077C GND2P53319 492 aa1.05□□□□□ -2.24
VAM6YDL077C MPS1P54199 764 aa1.05□□□□□ -2.24
VAM6YDL077C ERV25P54837 211 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C SAE3P89114 91 aa1.05□□□□□ -2.24
VAM6YDL077C YPL108WQ02872 168 aaPredicted RBP1.05□□□□□ -2.24
VAM6YDL077C ATG21Q02887 496 aa1.05□□□□□ -2.24
VAM6YDL077C ELP3Q02908 557 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C RSM10Q03201 203 aa1.05□□□□□ -2.24
VAM6YDL077C DIG2Q03373 323 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C SSY1Q03770 852 aa1.05□□□□□ -2.24
VAM6YDL077C SNU56Q03782 492 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C TVP15Q03860 143 aa1.05□□□□□ -2.24
VAM6YDL077C YMR114CQ04471 368 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C AIM32Q04689 311 aa1.05□□□□□ -2.24
VAM6YDL077C TVP18Q04767 167 aa1.05□□□□□ -2.24
VAM6YDL077C BSC2Q05611 235 aa1.05□□□□□ -2.24
VAM6YDL077C TOS4Q06266 489 aa1.05□□□□□ -2.24
VAM6YDL077C CTS2Q06350 511 aa1.05□□□□□ -2.24
VAM6YDL077C PHO92Q06390 306 aa1.05□□□□□ -2.24
VAM6YDL077C YPR127WQ06494 345 aa1.05□□□□□ -2.24
VAM6YDL077C YPR174CQ06616 221 aaPredicted RBP1.05□□□□□ -2.24
VAM6YDL077C HDA2Q06629 674 aa1.05□□□□□ -2.24
VAM6YDL077C YFT2Q06676 274 aa1.05□□□□□ -2.24
VAM6YDL077C CDA1Q06702 301 aa1.05□□□□□ -2.24
VAM6YDL077C LUC7Q07508 261 aaPredicted RBP1.05□□□□□ -2.24
VAM6YDL077C ESC8Q08119 714 aa1.05□□□□□ -2.24
VAM6YDL077C RDR1Q08904 546 aa1.05□□□□□ -2.24
VAM6YDL077C YOR022CQ12204 715 aa1.05□□□□□ -2.24
VAM6YDL077C HAT1Q12341 374 aa1.05□□□□□ -2.24
VAM6YDL077C YOR012WQ12351 137 aa1.05□□□□□ -2.24
VAM6YDL077C RIB2Q12362 591 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C PNS1Q12412 539 aa1.05□□□□□ -2.24
VAM6YDL077C AGC1Q12482 902 aa1.05□□□□□ -2.24
VAM6YDL077C NBL1Q3E7Y6 73 aa1.05□□□□□ -2.24
VAM6YDL077C YLR462WO13556 202 aa1.05□□□□□ -2.24
VAM6YDL077C HIS4P00815 799 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C HTB1P02293 131 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C HTB2P02294 131 aa1.05□□□□□ -2.24
VAM6YDL077C BI4P03879 638 aa1.05□□□□□ -2.24
VAM6YDL077C GAL80P04387 435 aa1.05□□□□□ -2.24
VAM6YDL077C CAN1P04817 590 aa1.05□□□□□ -2.24
VAM6YDL077C ARG3P05150 338 aa1.05□□□□□ -2.24
VAM6YDL077C CTT1P06115 562 aa1.05□□□□□ -2.24
VAM6YDL077C STE3P06783 470 aa1.05□□□□□ -2.24
VAM6YDL077C SSA3P09435 649 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C NAM2P11325 894 aa1.05□□□□□ -2.24
VAM6YDL077C NHP6BP11633 99 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C GAL3P13045 520 aa1.05□□□□□ -2.24
VAM6YDL077C EST1P17214 699 aaPredicted RBP1.05□□□□□ -2.24
VAM6YDL077C SNF6P18888 332 aa1.05□□□□□ -2.24
VAM6YDL077C UTR1P21373 530 aa1.05□□□□□ -2.24
VAM6YDL077C CTR86P25355 563 aa1.05□□□□□ -2.24
VAM6YDL077C ATG22P25568 528 aa1.05□□□□□ -2.24
VAM6YDL077C YCR015CP25616 317 aa1.05□□□□□ -2.24
VAM6YDL077C DAL80P26343 269 aa1.05□□□□□ -2.24
VAM6YDL077C PRR1P28708 518 aa1.05□□□□□ -2.24
VAM6YDL077C SAC1P32368 623 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C SPR1P32603 445 aa1.05□□□□□ -2.24
VAM6YDL077C TRS65P32893 560 aa1.05□□□□□ -2.24
VAM6YDL077C PRP40P33203 583 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C LHP1P33399 275 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C TGL1P34163 548 aa1.05□□□□□ -2.24
VAM6YDL077C MCD4P36051 919 aa1.05□□□□□ -2.24
VAM6YDL077C AIM29P36154 155 aa1.05□□□□□ -2.24
VAM6YDL077C MAL32P38158 584 aa1.05□□□□□ -2.24
VAM6YDL077C YBL028CP38202 106 aa1.05□□□□□ -2.24
VAM6YDL077C STB5P38699 743 aa1.05□□□□□ -2.24
VAM6YDL077C MSR1P38714 643 aa1.05□□□□□ -2.24
VAM6YDL077C YHL050CP38721 697 aa1.05□□□□□ -2.24
VAM6YDL077C YHL049CP38722 271 aa1.05□□□□□ -2.24
VAM6YDL077C ERP5P38819 212 aa1.05□□□□□ -2.24
VAM6YDL077C NSG1P38837 291 aa1.05□□□□□ -2.24
VAM6YDL077C CRP1P38845 465 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C LYS9P38999 446 aa1.05□□□□□ -2.24
VAM6YDL077C UIP3P39547 235 aa1.05□□□□□ -2.24
VAM6YDL077C YEL075CP39972 122 aa1.05□□□□□ -2.24
VAM6YDL077C YEL020CP39994 560 aa1.05□□□□□ -2.24
VAM6YDL077C FIR1P40020 876 aa1.05□□□□□ -2.24
VAM6YDL077C LCP5P40079 357 aaPredicted RBP1.05□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms