RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 SPTBN2O15020 2390 aa8.61□□□□□ -1.03
PHGDH-225ENST00000641720 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.61□□□□□ -1.03
PHGDH-225ENST00000641720 H3BNC9 293 aa8.61□□□□□ -1.03
PHGDH-225ENST00000641720 SH2B2O14492 632 aaPredicted RBP8.61□□□□□ -1.03
PHGDH-225ENST00000641720 NKRFO15226 690 aaKnown RBP eCLIP8.61□□□□□ -1.03
PHGDH-225ENST00000641720 TBX10O75333 385 aa8.61□□□□□ -1.03
PHGDH-225ENST00000641720 F2P00734 622 aa8.61□□□□□ -1.03
PHGDH-225ENST00000641720 KCNJ6P48051 423 aa8.61□□□□□ -1.03
PHGDH-225ENST00000641720 TRDNQ13061 729 aa8.61□□□□□ -1.03
PHGDH-225ENST00000641720 CAMK1Q14012 370 aa8.61□□□□□ -1.03
PHGDH-225ENST00000641720 PTGISQ16647 500 aa8.61□□□□□ -1.03
PHGDH-225ENST00000641720 EPC2Q52LR7 807 aa8.61□□□□□ -1.03
PHGDH-225ENST00000641720 TCEAL5Q5H9L2 206 aa8.61□□□□□ -1.03
PHGDH-225ENST00000641720 ZNF618Q5T7W0 954 aa8.61□□□□□ -1.03
PHGDH-225ENST00000641720 NSMFQ6X4W1 530 aa8.61□□□□□ -1.03
PHGDH-225ENST00000641720 FBXO22Q8NEZ5 403 aa8.61□□□□□ -1.03
PHGDH-225ENST00000641720 NEK1Q96PY6 1258 aa8.61□□□□□ -1.03
PHGDH-225ENST00000641720 TMEM47Q9BQJ4 181 aa8.61□□□□□ -1.03
PHGDH-225ENST00000641720 UBAC1Q9BSL1 405 aa8.61□□□□□ -1.03
PHGDH-225ENST00000641720 LRRC2Q9BYS8 371 aa8.61□□□□□ -1.03
PHGDH-225ENST00000641720 FTOQ9C0B1 505 aaKnown RBP eCLIP8.61□□□□□ -1.03
PHGDH-225ENST00000641720 COL20A1Q9P218 1284 aa8.61□□□□□ -1.03
PHGDH-225ENST00000641720 CCPG1Q9ULG6 757 aa8.61□□□□□ -1.03
PHGDH-225ENST00000641720 MAP1BP46821 2468 aaKnown RBP8.6□□□□□ -1.03
PHGDH-225ENST00000641720 DOCK8Q8NF50 2099 aa8.6□□□□□ -1.03
PHGDH-225ENST00000641720 MBTPS2O43462 519 aa8.6□□□□□ -1.03
PHGDH-225ENST00000641720 KPNA6O60684 536 aa8.6□□□□□ -1.03
PHGDH-225ENST00000641720 SNHG28P0DPA3 235 aa8.6□□□□□ -1.03
PHGDH-225ENST00000641720 TOP1P11387 765 aaKnown RBP8.6□□□□□ -1.03
PHGDH-225ENST00000641720 CASTP20810 708 aaKnown RBP8.6□□□□□ -1.03
PHGDH-225ENST00000641720 SSTR3P32745 418 aaPredicted RBP8.6□□□□□ -1.03
PHGDH-225ENST00000641720 SLC1A4P43007 532 aa8.6□□□□□ -1.03
PHGDH-225ENST00000641720 NT5C2P49902 561 aa8.6□□□□□ -1.03
PHGDH-225ENST00000641720 RPS6P62753 249 aaKnown RBP8.6□□□□□ -1.03
PHGDH-225ENST00000641720 EXOSC10Q01780 885 aaKnown RBP8.6□□□□□ -1.03
PHGDH-225ENST00000641720 KRT32Q14532 448 aa8.6□□□□□ -1.03
PHGDH-225ENST00000641720 PPP2R5BQ15173 497 aa8.6□□□□□ -1.03
PHGDH-225ENST00000641720 PUS10Q3MIT2 529 aaKnown RBP8.6□□□□□ -1.03
PHGDH-225ENST00000641720 PLEKHG4Q58EX7 1191 aa8.6□□□□□ -1.03
PHGDH-225ENST00000641720 FAM47CQ5HY64 1035 aa8.6□□□□□ -1.03
PHGDH-225ENST00000641720 IQCA1Q86XH1 822 aa8.6□□□□□ -1.03
PHGDH-225ENST00000641720 IGDCC4Q8TDY8 1250 aa8.6□□□□□ -1.03
PHGDH-225ENST00000641720 SCFD2Q8WU76 684 aa8.6□□□□□ -1.03
PHGDH-225ENST00000641720 AFG1LQ8WV93 481 aa8.6□□□□□ -1.03
PHGDH-225ENST00000641720 IL17RAQ96F46 866 aa8.6□□□□□ -1.03
PHGDH-225ENST00000641720 KIF2CQ99661 725 aa8.6□□□□□ -1.03
PHGDH-225ENST00000641720 UPF3BQ9BZI7 483 aaKnown RBP8.6□□□□□ -1.03
PHGDH-225ENST00000641720 LY9Q9HBG7 655 aa8.6□□□□□ -1.03
PHGDH-225ENST00000641720 HDAC6Q9UBN7 1215 aa8.6□□□□□ -1.03
PHGDH-225ENST00000641720 ADD3Q9UEY8 706 aaKnown RBP8.6□□□□□ -1.03
PHGDH-225ENST00000641720 MUTYHQ9UIF7 546 aa8.6□□□□□ -1.03
PHGDH-225ENST00000641720 MTMR7Q9Y216 660 aa8.6□□□□□ -1.03
PHGDH-225ENST00000641720 ACACBO00763 2458 aa8.6□□□□□ -1.03
PHGDH-225ENST00000641720 CHD6Q8TD26 2715 aa8.6□□□□□ -1.03
PHGDH-225ENST00000641720 WDR19Q8NEZ3 1342 aa8.59□□□□□ -1.03
PHGDH-225ENST00000641720 C5orf67F2Z3F1 127 aa8.59□□□□□ -1.03
PHGDH-225ENST00000641720 IFIT3O14879 490 aaKnown RBP8.59□□□□□ -1.03
PHGDH-225ENST00000641720 RGS20O76081 388 aa8.59□□□□□ -1.03
PHGDH-225ENST00000641720 PARNO95453 639 aaKnown RBP8.59□□□□□ -1.03
PHGDH-225ENST00000641720 RPS6KB1P23443 525 aa8.59□□□□□ -1.03
PHGDH-225ENST00000641720 MCM5P33992 734 aa8.59□□□□□ -1.03
PHGDH-225ENST00000641720 SLC16A2P36021 539 aa8.59□□□□□ -1.03
PHGDH-225ENST00000641720 ANAPC15P60006 121 aa8.59□□□□□ -1.03
PHGDH-225ENST00000641720 ZNF200P98182 395 aaPredicted RBP8.59□□□□□ -1.03
PHGDH-225ENST00000641720 HYAL1Q12794 435 aa8.59□□□□□ -1.03
PHGDH-225ENST00000641720 CBX2Q14781 532 aaPredicted RBP8.59□□□□□ -1.03
PHGDH-225ENST00000641720 TIGD5Q53EQ6 642 aa8.59□□□□□ -1.03
PHGDH-225ENST00000641720 IFIT1BQ5T764 474 aaKnown RBP8.59□□□□□ -1.03
PHGDH-225ENST00000641720 BLOC1S2Q6QNY1 142 aa8.59□□□□□ -1.03
PHGDH-225ENST00000641720 DHX32Q7L7V1 743 aaKnown RBP8.59□□□□□ -1.03
PHGDH-225ENST00000641720 RPAINQ86UA6 219 aa8.59□□□□□ -1.03
PHGDH-225ENST00000641720 DGKHQ86XP1 1220 aa8.59□□□□□ -1.03
PHGDH-225ENST00000641720 RNF135Q8IUD6 432 aa8.59□□□□□ -1.03
PHGDH-225ENST00000641720 RETREG2Q8NC44 543 aa8.59□□□□□ -1.03
PHGDH-225ENST00000641720 PNMA1Q8ND90 353 aa8.59□□□□□ -1.03
PHGDH-225ENST00000641720 BANK1Q8NDB2 785 aa8.59□□□□□ -1.03
PHGDH-225ENST00000641720 DBF4BQ8NFT6 615 aa8.59□□□□□ -1.03
PHGDH-225ENST00000641720 DNERQ8NFT8 737 aa8.59□□□□□ -1.03
PHGDH-225ENST00000641720 TBC1D5Q92609 795 aa8.59□□□□□ -1.03
PHGDH-225ENST00000641720 EMID1Q96A84 441 aaPredicted RBP8.59□□□□□ -1.03
PHGDH-225ENST00000641720 MSLNLQ96KJ4 702 aa8.59□□□□□ -1.03
PHGDH-225ENST00000641720 UIMC1Q96RL1 719 aa8.59□□□□□ -1.03
PHGDH-225ENST00000641720 MYL10Q9BUA6 226 aa8.59□□□□□ -1.03
PHGDH-225ENST00000641720 C22orf23Q9BZE7 217 aa8.59□□□□□ -1.03
PHGDH-225ENST00000641720 FRMPD2Q68DX3 1309 aaPredicted RBP8.58□□□□□ -1.04
PHGDH-225ENST00000641720 USP24Q9UPU5 2620 aa8.58□□□□□ -1.04
PHGDH-225ENST00000641720 ST18O60284 1047 aa8.58□□□□□ -1.04
PHGDH-225ENST00000641720 EIF5BO60841 1220 aaKnown RBP8.58□□□□□ -1.04
PHGDH-225ENST00000641720 EFCAB14O75071 495 aa8.58□□□□□ -1.04
PHGDH-225ENST00000641720 TXNP10599 105 aaKnown RBP8.58□□□□□ -1.04
PHGDH-225ENST00000641720 PDHBP11177 359 aa8.58□□□□□ -1.04
PHGDH-225ENST00000641720 GTF2F1P35269 517 aaKnown RBP eCLIP8.58□□□□□ -1.04
PHGDH-225ENST00000641720 RBM25P49756 843 aaKnown RBP8.58□□□□□ -1.04
PHGDH-225ENST00000641720 PTK7Q13308 1070 aa8.58□□□□□ -1.04
PHGDH-225ENST00000641720 WTAPQ15007 396 aa8.58□□□□□ -1.04
PHGDH-225ENST00000641720 PPP4R3BQ5MIZ7 849 aa8.58□□□□□ -1.04
PHGDH-225ENST00000641720 SYDE2Q5VT97 1194 aa8.58□□□□□ -1.04
PHGDH-225ENST00000641720 FAM117BQ6P1L5 589 aa8.58□□□□□ -1.04
PHGDH-225ENST00000641720 SERINC5Q86VE9 423 aa8.58□□□□□ -1.04
PHGDH-225ENST00000641720 FBXO11Q86XK2 927 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms