RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 DDX39AO00148 427 aaKnown RBP24.38■■□□□ 1.49
TSPAN9-208ENST00000640568 GAS7O60861 476 aa24.38■■□□□ 1.49
TSPAN9-208ENST00000640568 DUSP11O75319 330 aaKnown RBP24.38■■□□□ 1.49
TSPAN9-208ENST00000640568 PTGDRQ13258 359 aa24.38■■□□□ 1.49
TSPAN9-208ENST00000640568 GJC2Q5T442 439 aaPredicted RBP24.38■■□□□ 1.49
TSPAN9-208ENST00000640568 ATL3Q6DD88 541 aa24.38■■□□□ 1.49
TSPAN9-208ENST00000640568 CYFIP1Q7L576 1253 aa24.38■■□□□ 1.49
TSPAN9-208ENST00000640568 LENG1Q96BZ8 264 aaPredicted RBP24.38■■□□□ 1.49
TSPAN9-208ENST00000640568 USP28Q96RU2 1077 aa24.38■■□□□ 1.49
TSPAN9-208ENST00000640568 CFAP45Q9UL16 551 aa24.38■■□□□ 1.49
TSPAN9-208ENST00000640568 GNEQ9Y223 722 aaKnown RBP24.38■■□□□ 1.49
TSPAN9-208ENST00000640568 LAD1O00515 517 aa24.38■■□□□ 1.49
TSPAN9-208ENST00000640568 DYNC1LI2O43237 492 aaPredicted RBP24.38■■□□□ 1.49
TSPAN9-208ENST00000640568 ADCY6O43306 1168 aa24.38■■□□□ 1.49
TSPAN9-208ENST00000640568 NCLP19338 710 aaKnown RBP24.38■■□□□ 1.49
TSPAN9-208ENST00000640568 LAMC2Q13753 1193 aa24.38■■□□□ 1.49
TSPAN9-208ENST00000640568 CELF3Q5SZQ8 465 aaKnown RBP24.38■■□□□ 1.49
TSPAN9-208ENST00000640568 TMEM63BQ5T3F8 832 aa24.38■■□□□ 1.49
TSPAN9-208ENST00000640568 SLC5A5Q92911 643 aa24.38■■□□□ 1.49
TSPAN9-208ENST00000640568 TMEM60Q9H2L4 133 aa24.38■■□□□ 1.49
TSPAN9-208ENST00000640568 JPH1Q9HDC5 661 aaPredicted RBP24.38■■□□□ 1.49
TSPAN9-208ENST00000640568 Q9Y3F1 56 aa24.38■■□□□ 1.49
TSPAN9-208ENST00000640568 CLIC4Q9Y696 253 aa24.38■■□□□ 1.49
TSPAN9-208ENST00000640568 TXKP42681 527 aa24.37■■□□□ 1.49
TSPAN9-208ENST00000640568 KRT85P78386 507 aa24.37■■□□□ 1.49
TSPAN9-208ENST00000640568 DNM1Q05193 864 aaKnown RBP24.37■■□□□ 1.49
TSPAN9-208ENST00000640568 ITGB3BPQ13352 177 aaPredicted RBP24.37■■□□□ 1.49
TSPAN9-208ENST00000640568 METTL7BQ6UX53 244 aa24.37■■□□□ 1.49
TSPAN9-208ENST00000640568 RIT2Q99578 217 aa24.37■■□□□ 1.49
TSPAN9-208ENST00000640568 FTOQ9C0B1 505 aaKnown RBP eCLIP24.37■■□□□ 1.49
TSPAN9-208ENST00000640568 XPNPEP3Q9NQH7 507 aa24.37■■□□□ 1.49
TSPAN9-208ENST00000640568 POLR3EQ9NVU0 708 aa24.37■■□□□ 1.49
TSPAN9-208ENST00000640568 NOP56O00567 594 aaKnown RBP24.36■■□□□ 1.49
TSPAN9-208ENST00000640568 FARP2O94887 1054 aaPredicted RBP24.36■■□□□ 1.49
TSPAN9-208ENST00000640568 SP4Q02446 784 aa24.36■■□□□ 1.49
TSPAN9-208ENST00000640568 STK38Q15208 465 aa24.36■■□□□ 1.49
TSPAN9-208ENST00000640568 TMEM266Q2M3C6 531 aa24.36■■□□□ 1.49
TSPAN9-208ENST00000640568 BRDTQ58F21 947 aaPredicted RBP24.36■■□□□ 1.49
TSPAN9-208ENST00000640568 HAS1Q92839 578 aa24.36■■□□□ 1.49
TSPAN9-208ENST00000640568 GJA10Q969M2 543 aa24.36■■□□□ 1.49
TSPAN9-208ENST00000640568 SPATA33Q96N06 139 aa24.36■■□□□ 1.49
TSPAN9-208ENST00000640568 PAK6Q9NQU5 681 aaPredicted RBP24.36■■□□□ 1.49
TSPAN9-208ENST00000640568 TFIP11Q9UBB9 837 aaKnown RBP24.36■■□□□ 1.49
TSPAN9-208ENST00000640568 SLC9A2Q9UBY0 812 aa24.36■■□□□ 1.49
TSPAN9-208ENST00000640568 ATP2C1P98194 919 aaPredicted RBP24.35■■□□□ 1.49
TSPAN9-208ENST00000640568 ARHGAP1Q07960 439 aa24.35■■□□□ 1.49
TSPAN9-208ENST00000640568 DEFB118Q96PH6 123 aa24.35■■□□□ 1.49
TSPAN9-208ENST00000640568 MTMR9Q96QG7 549 aa24.35■■□□□ 1.49
TSPAN9-208ENST00000640568 PCDHA12Q9UN75 941 aa24.35■■□□□ 1.49
TSPAN9-208ENST00000640568 MYCNP04198 464 aaPredicted RBP24.34■■□□□ 1.49
TSPAN9-208ENST00000640568 C6orf222P0C671 652 aaPredicted RBP24.34■■□□□ 1.49
TSPAN9-208ENST00000640568 PTGS1P23219 599 aa24.34■■□□□ 1.49
TSPAN9-208ENST00000640568 KRT76Q01546 638 aa24.34■■□□□ 1.49
TSPAN9-208ENST00000640568 EMID1Q96A84 441 aaPredicted RBP24.34■■□□□ 1.49
TSPAN9-208ENST00000640568 TMEM106CQ9BVX2 250 aa24.34■■□□□ 1.49
TSPAN9-208ENST00000640568 TTC12Q9H892 705 aaPredicted RBP24.34■■□□□ 1.49
TSPAN9-208ENST00000640568 SYNRGQ9UMZ2 1314 aa24.34■■□□□ 1.49
TSPAN9-208ENST00000640568 CHMP2AO43633 222 aa24.33■■□□□ 1.49
TSPAN9-208ENST00000640568 PSMD10O75832 226 aa24.33■■□□□ 1.49
TSPAN9-208ENST00000640568 PRPHP41219 470 aa24.33■■□□□ 1.49
TSPAN9-208ENST00000640568 NASPP49321 788 aaPredicted RBP24.33■■□□□ 1.49
TSPAN9-208ENST00000640568 CPT1AP50416 773 aa24.33■■□□□ 1.49
TSPAN9-208ENST00000640568 DTHD1Q6ZMT9 781 aa24.33■■□□□ 1.49
TSPAN9-208ENST00000640568 C4orf32Q8N8J7 132 aa24.33■■□□□ 1.49
TSPAN9-208ENST00000640568 BCAS3Q9H6U6 928 aa24.33■■□□□ 1.49
TSPAN9-208ENST00000640568 DHX15O43143 795 aaKnown RBP24.32■■□□□ 1.48
TSPAN9-208ENST00000640568 YEATS4O95619 227 aa24.32■■□□□ 1.48
TSPAN9-208ENST00000640568 PGK1P00558 417 aa24.32■■□□□ 1.48
TSPAN9-208ENST00000640568 GJA9P57773 515 aa24.32■■□□□ 1.48
TSPAN9-208ENST00000640568 COL13A1Q5TAT6 717 aaPredicted RBP24.32■■□□□ 1.48
TSPAN9-208ENST00000640568 ARL6IP4Q66PJ3 421 aaKnown RBP24.32■■□□□ 1.48
TSPAN9-208ENST00000640568 PPTC7Q8NI37 304 aa24.32■■□□□ 1.48
TSPAN9-208ENST00000640568 RAB34Q9BZG1 259 aa24.32■■□□□ 1.48
TSPAN9-208ENST00000640568 SAMM50Q9Y512 469 aa24.32■■□□□ 1.48
TSPAN9-208ENST00000640568 ELP1O95163 1332 aa24.32■■□□□ 1.48
TSPAN9-208ENST00000640568 WDR81Q562E7 1941 aa24.32■■□□□ 1.48
TSPAN9-208ENST00000640568 TECP42680 631 aa24.32■■□□□ 1.48
TSPAN9-208ENST00000640568 PTPAQ15257 358 aa24.32■■□□□ 1.48
TSPAN9-208ENST00000640568 LHX8Q68G74 356 aa24.32■■□□□ 1.48
TSPAN9-208ENST00000640568 ZNF746Q6NUN9 644 aaPredicted RBP24.32■■□□□ 1.48
TSPAN9-208ENST00000640568 RNF180Q86T96 592 aa24.32■■□□□ 1.48
TSPAN9-208ENST00000640568 AFG1LQ8WV93 481 aa24.32■■□□□ 1.48
TSPAN9-208ENST00000640568 UPF3AQ9H1J1 476 aaKnown RBP24.32■■□□□ 1.48
TSPAN9-208ENST00000640568 UNC45AQ9H3U1 944 aa24.32■■□□□ 1.48
TSPAN9-208ENST00000640568 MYH9P35579 1960 aaKnown RBP24.31■■□□□ 1.48
TSPAN9-208ENST00000640568 ZEB2O60315 1214 aa24.31■■□□□ 1.48
TSPAN9-208ENST00000640568 GJB1P08034 283 aa24.31■■□□□ 1.48
TSPAN9-208ENST00000640568 SLC39A14Q15043 492 aa24.31■■□□□ 1.48
TSPAN9-208ENST00000640568 FSCN1Q16658 493 aaKnown RBP24.31■■□□□ 1.48
TSPAN9-208ENST00000640568 HSDL1Q3SXM5 330 aa24.31■■□□□ 1.48
TSPAN9-208ENST00000640568 NCAPH2Q6IBW4 605 aa24.31■■□□□ 1.48
TSPAN9-208ENST00000640568 SMAP1Q8IYB5 467 aaPredicted RBP24.31■■□□□ 1.48
TSPAN9-208ENST00000640568 LINC00301Q8NCQ3 95 aa24.31■■□□□ 1.48
TSPAN9-208ENST00000640568 WDR64B1ANS9 1081 aa24.3■■□□□ 1.48
TSPAN9-208ENST00000640568 SPTLC2O15270 562 aa24.3■■□□□ 1.48
TSPAN9-208ENST00000640568 ADAMTS4O75173 837 aa24.3■■□□□ 1.48
TSPAN9-208ENST00000640568 MMP3P08254 477 aa24.3■■□□□ 1.48
TSPAN9-208ENST00000640568 MARCKSP29966 332 aaPredicted RBP24.3■■□□□ 1.48
TSPAN9-208ENST00000640568 SFNP31947 248 aa24.3■■□□□ 1.48
TSPAN9-208ENST00000640568 JAK3P52333 1124 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms