RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 SPIRE2Q8WWL2 714 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 TCHPQ9BT92 498 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 LRRC4CQ9HCJ2 640 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 DDX41Q9UJV9 622 aaKnown RBP5.04□□□□□ -1.6
GABRA1-220ENST00000638159 SRPK3Q9UPE1 567 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 GVINP1Q7Z2Y8 2422 aa5.04□□□□□ -1.6
GABRA1-220ENST00000638159 TIAM2Q8IVF5 1701 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 H3BNC9 293 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 H7C1W4 665 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 SSBP05455 408 aaKnown RBP eCLIP5.03□□□□□ -1.6
GABRA1-220ENST00000638159 GNSP15586 552 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 NBL1P41271 181 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 SIM1P81133 766 aaPredicted RBP5.03□□□□□ -1.6
GABRA1-220ENST00000638159 MECOMQ03112 1051 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 KARSQ15046 597 aaKnown RBP5.03□□□□□ -1.6
GABRA1-220ENST00000638159 C2orf27AQ580R0 203 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 FAM160B1Q5W0V3 765 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 C16orf59Q7L2K0 433 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 C1orf210Q8IVY1 113 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 CELF5Q8N6W0 485 aaKnown RBP5.03□□□□□ -1.6
GABRA1-220ENST00000638159 EFHBQ8N7U6 833 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 GIMAP8Q8ND71 665 aaPredicted RBP5.03□□□□□ -1.6
GABRA1-220ENST00000638159 PHTF1Q9UMS5 762 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 PCDHGA2Q9Y5H1 932 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 SLC4A4Q9Y6R1 1079 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 COL5A3P25940 1745 aaPredicted RBP5.03□□□□□ -1.6
GABRA1-220ENST00000638159 ARFGEF1Q9Y6D6 1849 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 GOLGA8CPA6NN73 597 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 GPR182O15218 404 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 CREMQ03060 361 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 ARID5AQ03989 594 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 PPFIA1Q13136 1202 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 ARHGAP15Q53QZ3 475 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 CCDC117Q8IWD4 279 aaPredicted RBP5.03□□□□□ -1.6
GABRA1-220ENST00000638159 GPR152Q8TDT2 470 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 PHF12Q96QT6 1004 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 UBAC1Q9BSL1 405 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 VAT1LQ9HCJ6 419 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 ALG13Q9NP73 1137 aaKnown RBP5.03□□□□□ -1.6
GABRA1-220ENST00000638159 MRPL17Q9NRX2 175 aaKnown RBP5.03□□□□□ -1.6
GABRA1-220ENST00000638159 MRPS23Q9Y3D9 190 aaKnown RBP5.03□□□□□ -1.6
GABRA1-220ENST00000638159 Q9Y3F1 56 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 BCORQ6W2J9 1755 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 F6X3S4 739 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 AXIN1O15169 862 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 LILRB3O75022 631 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 GLUD1P00367 558 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 SCG2P13521 617 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 MARCKSP29966 332 aaPredicted RBP5.03□□□□□ -1.6
GABRA1-220ENST00000638159 CNR2P34972 360 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 PHKA1P46020 1223 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 MFAP1P55081 439 aaKnown RBP5.03□□□□□ -1.6
GABRA1-220ENST00000638159 PTK7Q13308 1070 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 MFSD10Q14728 455 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 KIAA0753Q2KHM9 967 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 PPM1LQ5SGD2 360 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 CCDC144CPQ8IYA2 1237 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 SETD7Q8WTS6 366 aaKnown RBP5.03□□□□□ -1.6
GABRA1-220ENST00000638159 TEPSINQ96N21 525 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 DACT1Q9NYF0 836 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 PPP1R9AQ9ULJ8 1098 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 SLX4Q8IY92 1834 aa5.03□□□□□ -1.6
GABRA1-220ENST00000638159 RRN3P2A6NIE6 340 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 SLC28A2O43868 658 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 ABCB7O75027 752 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 ATXN1P54253 815 aaKnown RBP5.02□□□□□ -1.61
GABRA1-220ENST00000638159 USP39Q53GS9 565 aaKnown RBP5.02□□□□□ -1.61
GABRA1-220ENST00000638159 PSAPL1Q6NUJ1 521 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 FCHSD1Q86WN1 690 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 CDAN1Q8IWY9 1227 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 FAM126BQ8IXS8 530 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.02□□□□□ -1.61
GABRA1-220ENST00000638159 SDF4Q9BRK5 362 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 EDEM2Q9BV94 578 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 SLKQ9H2G2 1235 aaPredicted RBP5.02□□□□□ -1.61
GABRA1-220ENST00000638159 CLMPQ9H6B4 373 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 C1orf112Q9NSG2 853 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 ECHDC1Q9NTX5 307 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 SDK1Q7Z5N4 2213 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 SBF2Q86WG5 1849 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 PER2O15055 1255 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 SYPP08247 313 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 AOC1P19801 751 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 EPHB4P54760 987 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 VCPP55072 806 aaKnown RBP5.02□□□□□ -1.61
GABRA1-220ENST00000638159 CYP4A11Q02928 519 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 GFPT1Q06210 699 aaPredicted RBP5.02□□□□□ -1.61
GABRA1-220ENST00000638159 SLC9C2Q5TAH2 1124 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 TWF2Q6IBS0 349 aaKnown RBP5.02□□□□□ -1.61
GABRA1-220ENST00000638159 ZSCAN1Q8NBB4 408 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 TMEM9BQ9NQ34 198 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 FLNBO75369 2602 aaKnown RBP5.02□□□□□ -1.61
GABRA1-220ENST00000638159 ASGR2P07307 311 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 HNF1BP35680 557 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 KRT25Q7Z3Z0 450 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 USP37Q86T82 979 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 DCLK2Q8N568 766 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 LENG1Q96BZ8 264 aaPredicted RBP5.02□□□□□ -1.61
GABRA1-220ENST00000638159 XAGE2Q96GT9 111 aa5.02□□□□□ -1.61
GABRA1-220ENST00000638159 PLA2G12BQ9BX93 195 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms