RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 HDLBPQ00341 1268 aaKnown RBP14.11□□□□□ -0.15
UBE3A-228ENST00000638155 RRM2BQ7LG56 351 aa14.11□□□□□ -0.15
UBE3A-228ENST00000638155 SYNDIG1LA6NDD5 238 aa14.11□□□□□ -0.15
UBE3A-228ENST00000638155 RASSF9O75901 435 aa14.11□□□□□ -0.15
UBE3A-228ENST00000638155 PLTPP55058 493 aa14.11□□□□□ -0.15
UBE3A-228ENST00000638155 MYL7Q01449 175 aa14.11□□□□□ -0.15
UBE3A-228ENST00000638155 SPARCL1Q14515 664 aa14.11□□□□□ -0.15
UBE3A-228ENST00000638155 ZMYND12Q9H0C1 365 aa14.11□□□□□ -0.15
UBE3A-228ENST00000638155 WASHC5Q12768 1159 aa14.11□□□□□ -0.15
UBE3A-228ENST00000638155 CNGA2Q16280 664 aa14.11□□□□□ -0.15
UBE3A-228ENST00000638155 AOC3Q16853 763 aa14.11□□□□□ -0.15
UBE3A-228ENST00000638155 CCDC103Q8IW40 242 aa14.11□□□□□ -0.15
UBE3A-228ENST00000638155 STAMBPL1Q96FJ0 436 aa14.11□□□□□ -0.15
UBE3A-228ENST00000638155 ZNF644Q9H582 1327 aaPredicted RBP14.11□□□□□ -0.15
UBE3A-228ENST00000638155 ATP2B4P23634 1241 aa14.11□□□□□ -0.15
UBE3A-228ENST00000638155 MAPK4P31152 587 aa14.11□□□□□ -0.15
UBE3A-228ENST00000638155 PTK2Q05397 1052 aa14.11□□□□□ -0.15
UBE3A-228ENST00000638155 SF3B3Q15393 1217 aaKnown RBP14.11□□□□□ -0.15
UBE3A-228ENST00000638155 SLFN12Q8IYM2 578 aa14.11□□□□□ -0.15
UBE3A-228ENST00000638155 TTC30BQ8N4P2 665 aa14.11□□□□□ -0.15
UBE3A-228ENST00000638155 MTRQ99707 1265 aa14.11□□□□□ -0.15
UBE3A-228ENST00000638155 NSMCE4AQ9NXX6 385 aa14.11□□□□□ -0.15
UBE3A-228ENST00000638155 CCDC151A5D8V7 595 aa14.11□□□□□ -0.15
UBE3A-228ENST00000638155 SLCO1A2P46721 670 aa14.11□□□□□ -0.15
UBE3A-228ENST00000638155 IRX1P78414 480 aaPredicted RBP14.11□□□□□ -0.15
UBE3A-228ENST00000638155 TMPRSS15P98073 1019 aa14.11□□□□□ -0.15
UBE3A-228ENST00000638155 NSUN2Q08J23 767 aaKnown RBP eCLIP14.11□□□□□ -0.15
UBE3A-228ENST00000638155 PPP2R5BQ15173 497 aa14.11□□□□□ -0.15
UBE3A-228ENST00000638155 BTBD6Q96KE9 485 aa14.11□□□□□ -0.15
UBE3A-228ENST00000638155 HADHAP40939 763 aa14.1□□□□□ -0.15
UBE3A-228ENST00000638155 TBC1D4O60343 1298 aa14.1□□□□□ -0.15
UBE3A-228ENST00000638155 CUL1Q13616 776 aa14.1□□□□□ -0.15
UBE3A-228ENST00000638155 OTUD7BQ6GQQ9 843 aa14.1□□□□□ -0.15
UBE3A-228ENST00000638155 LRRC8AQ8IWT6 810 aa14.1□□□□□ -0.15
UBE3A-228ENST00000638155 NBPF26B4DH59 902 aa14.1□□□□□ -0.15
UBE3A-228ENST00000638155 MBD4O95243 580 aa14.1□□□□□ -0.15
UBE3A-228ENST00000638155 KRT17Q04695 432 aa14.1□□□□□ -0.15
UBE3A-228ENST00000638155 KRT72Q14CN4 511 aa14.1□□□□□ -0.15
UBE3A-228ENST00000638155 NBPF15Q8N660 670 aa14.1□□□□□ -0.15
UBE3A-228ENST00000638155 RRAGDQ9NQL2 400 aaPredicted RBP14.1□□□□□ -0.15
UBE3A-228ENST00000638155 DENND2AQ9ULE3 1009 aa14.1□□□□□ -0.15
UBE3A-228ENST00000638155 B4E1Z4 1266 aa14.1□□□□□ -0.15
UBE3A-228ENST00000638155 ARL4AP40617 200 aa14.1□□□□□ -0.15
UBE3A-228ENST00000638155 TFAP4Q01664 338 aa14.1□□□□□ -0.15
UBE3A-228ENST00000638155 MESDQ14696 234 aa14.1□□□□□ -0.15
UBE3A-228ENST00000638155 FAM47CQ5HY64 1035 aa14.1□□□□□ -0.15
UBE3A-228ENST00000638155 TRIM69Q86WT6 500 aa14.1□□□□□ -0.15
UBE3A-228ENST00000638155 MBD2Q9UBB5 411 aa14.1□□□□□ -0.15
UBE3A-228ENST00000638155 TBC1D1Q86TI0 1168 aaPredicted RBP14.1□□□□□ -0.15
UBE3A-228ENST00000638155 WDR75Q8IWA0 830 aaKnown RBP14.1□□□□□ -0.15
UBE3A-228ENST00000638155 SIKE1Q9BRV8 207 aa14.1□□□□□ -0.15
UBE3A-228ENST00000638155 V9GY48 417 aaPredicted RBP14.1□□□□□ -0.15
UBE3A-228ENST00000638155 TADA2BQ86TJ2 420 aa14.1□□□□□ -0.15
UBE3A-228ENST00000638155 VCPP55072 806 aaKnown RBP14.1□□□□□ -0.15
UBE3A-228ENST00000638155 IGBP1P78318 339 aa14.1□□□□□ -0.15
UBE3A-228ENST00000638155 CENPUQ71F23 418 aa14.1□□□□□ -0.15
UBE3A-228ENST00000638155 KIF2CQ99661 725 aa14.1□□□□□ -0.15
UBE3A-228ENST00000638155 EHD2Q9NZN4 543 aa14.1□□□□□ -0.15
UBE3A-228ENST00000638155 SOX13Q9UN79 622 aa14.1□□□□□ -0.15
UBE3A-228ENST00000638155 NIP7Q9Y221 180 aaKnown RBP eCLIP14.1□□□□□ -0.15
UBE3A-228ENST00000638155 CHUKO15111 745 aa14.09□□□□□ -0.15
UBE3A-228ENST00000638155 POLR2FP61218 127 aaKnown RBP14.09□□□□□ -0.15
UBE3A-228ENST00000638155 ARHGEF16Q5VV41 709 aa14.09□□□□□ -0.15
UBE3A-228ENST00000638155 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.09□□□□□ -0.15
UBE3A-228ENST00000638155 PITPNM3Q9BZ71 974 aa14.09□□□□□ -0.15
UBE3A-228ENST00000638155 GPBP1L1Q9HC44 474 aaPredicted RBP14.09□□□□□ -0.15
UBE3A-228ENST00000638155 IL10P22301 178 aa14.09□□□□□ -0.15
UBE3A-228ENST00000638155 TESK2Q96S53 571 aa14.09□□□□□ -0.15
UBE3A-228ENST00000638155 ASAP2O43150 1006 aa14.09□□□□□ -0.15
UBE3A-228ENST00000638155 GUCA1CO95843 209 aa14.09□□□□□ -0.15
UBE3A-228ENST00000638155 TRIP4Q15650 581 aaPredicted RBP14.09□□□□□ -0.15
UBE3A-228ENST00000638155 RCSD1Q6JBY9 416 aa14.09□□□□□ -0.15
UBE3A-228ENST00000638155 NDUFAF2Q8N183 169 aa14.09□□□□□ -0.15
UBE3A-228ENST00000638155 BRD1O95696 1058 aa14.09□□□□□ -0.15
UBE3A-228ENST00000638155 KRT1P04264 644 aa14.09□□□□□ -0.15
UBE3A-228ENST00000638155 KRT39Q6A163 491 aa14.09□□□□□ -0.15
UBE3A-228ENST00000638155 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.09□□□□□ -0.15
UBE3A-228ENST00000638155 ACSBG1Q96GR2 724 aa14.09□□□□□ -0.15
UBE3A-228ENST00000638155 BRD8Q9H0E9 1235 aa14.09□□□□□ -0.15
UBE3A-228ENST00000638155 MFAP3P55082 362 aa14.09□□□□□ -0.15
UBE3A-228ENST00000638155 AFPP02771 609 aaKnown RBP14.09□□□□□ -0.15
UBE3A-228ENST00000638155 FAM178BQ8IXR5 827 aa14.09□□□□□ -0.15
UBE3A-228ENST00000638155 NEK9Q8TD19 979 aa14.09□□□□□ -0.15
UBE3A-228ENST00000638155 BRIP1Q9BX63 1249 aa14.09□□□□□ -0.15
UBE3A-228ENST00000638155 BLOC1S6Q9UL45 172 aa14.09□□□□□ -0.15
UBE3A-228ENST00000638155 WDR7Q9Y4E6 1490 aa14.09□□□□□ -0.15
UBE3A-228ENST00000638155 H2AFZP0C0S5 128 aa14.09□□□□□ -0.15
UBE3A-228ENST00000638155 CA4P22748 312 aa14.09□□□□□ -0.15
UBE3A-228ENST00000638155 PDCLQ13371 301 aa14.09□□□□□ -0.15
UBE3A-228ENST00000638155 H2AFVQ71UI9 128 aa14.09□□□□□ -0.15
UBE3A-228ENST00000638155 PYROXD1Q8WU10 500 aa14.09□□□□□ -0.15
UBE3A-228ENST00000638155 OLFML2BQ68BL8 750 aa14.08□□□□□ -0.15
UBE3A-228ENST00000638155 ANKRD44Q8N8A2 993 aa14.08□□□□□ -0.15
UBE3A-228ENST00000638155 RUBCNLQ9H714 662 aa14.08□□□□□ -0.15
UBE3A-228ENST00000638155 GTSE1Q9NYZ3 720 aa14.08□□□□□ -0.15
UBE3A-228ENST00000638155 MAST3O60307 1309 aa14.08□□□□□ -0.16
UBE3A-228ENST00000638155 SOS1Q07889 1333 aaPredicted RBP14.08□□□□□ -0.16
UBE3A-228ENST00000638155 EPHB1P54762 984 aa14.08□□□□□ -0.16
UBE3A-228ENST00000638155 NR1H3Q13133 447 aa14.08□□□□□ -0.16
UBE3A-228ENST00000638155 SH3BP5LQ7L8J4 393 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms