RNA–Protein interactions for RNA: ENST00000638140.1

EFHC1-239, Transcript of EF-hand domain containing 1, humanhuman

TSL 4

Gene EFHC1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-239ENST00000638140 PSEN2P49810 448 aa13.9□□□□□ -0.18
EFHC1-239ENST00000638140 EPHB4P54760 987 aa13.9□□□□□ -0.18
EFHC1-239ENST00000638140 ARHGAP4P98171 946 aa13.9□□□□□ -0.18
EFHC1-239ENST00000638140 SP4Q02446 784 aa13.9□□□□□ -0.18
EFHC1-239ENST00000638140 AP3B2Q13367 1082 aa13.9□□□□□ -0.18
EFHC1-239ENST00000638140 SHHQ15465 462 aa13.9□□□□□ -0.18
EFHC1-239ENST00000638140 ME3Q16798 604 aa13.9□□□□□ -0.18
EFHC1-239ENST00000638140 MFSD5Q6N075 450 aa13.9□□□□□ -0.18
EFHC1-239ENST00000638140 CDHR1Q96JP9 859 aa13.9□□□□□ -0.18
EFHC1-239ENST00000638140 GPR20Q99678 358 aa13.9□□□□□ -0.18
EFHC1-239ENST00000638140 C16orf70Q9BSU1 422 aa13.9□□□□□ -0.18
EFHC1-239ENST00000638140 HIPK3Q9H422 1215 aa13.9□□□□□ -0.18
EFHC1-239ENST00000638140 KCNH7Q9NS40 1196 aa13.9□□□□□ -0.18
EFHC1-239ENST00000638140 PKD2L1Q9P0L9 805 aa13.9□□□□□ -0.18
EFHC1-239ENST00000638140 LAMA2P24043 3122 aaKnown RBP13.9□□□□□ -0.18
EFHC1-239ENST00000638140 UMODL1Q5DID0 1318 aa13.9□□□□□ -0.19
EFHC1-239ENST00000638140 HAS3O00219 553 aa13.89□□□□□ -0.19
EFHC1-239ENST00000638140 MEIS1O00470 390 aa13.89□□□□□ -0.19
EFHC1-239ENST00000638140 LARGE1O95461 756 aa13.89□□□□□ -0.19
EFHC1-239ENST00000638140 CTDNEP1O95476 244 aa13.89□□□□□ -0.19
EFHC1-239ENST00000638140 F2P00734 622 aa13.89□□□□□ -0.19
EFHC1-239ENST00000638140 CSF2RAP15509 400 aa13.89□□□□□ -0.19
EFHC1-239ENST00000638140 ZNF76P36508 570 aa13.89□□□□□ -0.19
EFHC1-239ENST00000638140 CCL23P55773 120 aa13.89□□□□□ -0.19
EFHC1-239ENST00000638140 FPGSQ05932 587 aa13.89□□□□□ -0.19
EFHC1-239ENST00000638140 PTPN11Q06124 597 aaPredicted RBP13.89□□□□□ -0.19
EFHC1-239ENST00000638140 MFSD10Q14728 455 aa13.89□□□□□ -0.19
EFHC1-239ENST00000638140 KIAA0753Q2KHM9 967 aa13.89□□□□□ -0.19
EFHC1-239ENST00000638140 CEP55Q53EZ4 464 aa13.89□□□□□ -0.19
EFHC1-239ENST00000638140 C9orf50Q5SZB4 431 aa13.89□□□□□ -0.19
EFHC1-239ENST00000638140 MCTP2Q6DN12 878 aa13.89□□□□□ -0.19
EFHC1-239ENST00000638140 GDF6Q6KF10 455 aaPredicted RBP13.89□□□□□ -0.19
EFHC1-239ENST00000638140 REXO1Q8N1G1 1221 aaKnown RBP13.89□□□□□ -0.19
EFHC1-239ENST00000638140 C7orf31Q8N865 590 aa13.89□□□□□ -0.19
EFHC1-239ENST00000638140 GIMAP8Q8ND71 665 aaPredicted RBP13.89□□□□□ -0.19
EFHC1-239ENST00000638140 BICD2Q8TD16 824 aa13.89□□□□□ -0.19
EFHC1-239ENST00000638140 RASGRP4Q8TDF6 673 aa13.89□□□□□ -0.19
EFHC1-239ENST00000638140 KIF2CQ99661 725 aa13.89□□□□□ -0.19
EFHC1-239ENST00000638140 C22orf23Q9BZE7 217 aa13.89□□□□□ -0.19
EFHC1-239ENST00000638140 HDAC6Q9UBN7 1215 aa13.89□□□□□ -0.19
EFHC1-239ENST00000638140 H3BRB1 525 aa13.88□□□□□ -0.19
EFHC1-239ENST00000638140 SOX1O00570 391 aaPredicted RBP13.88□□□□□ -0.19
EFHC1-239ENST00000638140 CDKL5O76039 1030 aa13.88□□□□□ -0.19
EFHC1-239ENST00000638140 PTGISQ16647 500 aa13.88□□□□□ -0.19
EFHC1-239ENST00000638140 SESTD1Q86VW0 696 aa13.88□□□□□ -0.19
EFHC1-239ENST00000638140 TMEM199Q8N511 208 aa13.88□□□□□ -0.19
EFHC1-239ENST00000638140 CCDC148Q8NFR7 591 aa13.88□□□□□ -0.19
EFHC1-239ENST00000638140 CRYGNQ8WXF5 182 aa13.88□□□□□ -0.19
EFHC1-239ENST00000638140 SEPT1Q8WYJ6 367 aa13.88□□□□□ -0.19
EFHC1-239ENST00000638140 NOC4LQ9BVI4 516 aaKnown RBP13.88□□□□□ -0.19
EFHC1-239ENST00000638140 KATNAL1Q9BW62 490 aa13.88□□□□□ -0.19
EFHC1-239ENST00000638140 TUT1Q9H6E5 874 aaKnown RBP13.88□□□□□ -0.19
EFHC1-239ENST00000638140 TRIOBPQ9H2D6 2365 aa13.87□□□□□ -0.19
EFHC1-239ENST00000638140 GSTTP1A0A1W2PQM5 241 aa13.87□□□□□ -0.19
EFHC1-239ENST00000638140 FAM86B1E9PN63 330 aa13.87□□□□□ -0.19
EFHC1-239ENST00000638140 LGALS2P05162 132 aa13.87□□□□□ -0.19
EFHC1-239ENST00000638140 CYP3A4P08684 503 aa13.87□□□□□ -0.19
EFHC1-239ENST00000638140 FAM86B2P0C5J1 330 aa13.87□□□□□ -0.19
EFHC1-239ENST00000638140 ACRP10323 421 aa13.87□□□□□ -0.19
EFHC1-239ENST00000638140 ZNF200P98182 395 aaPredicted RBP13.87□□□□□ -0.19
EFHC1-239ENST00000638140 LRIT3Q3SXY7 679 aa13.87□□□□□ -0.19
EFHC1-239ENST00000638140 UTP14CQ5TAP6 766 aaKnown RBP13.87□□□□□ -0.19
EFHC1-239ENST00000638140 C16orf59Q7L2K0 433 aa13.87□□□□□ -0.19
EFHC1-239ENST00000638140 LRCH3Q96II8 777 aa13.87□□□□□ -0.19
EFHC1-239ENST00000638140 UIMC1Q96RL1 719 aa13.87□□□□□ -0.19
EFHC1-239ENST00000638140 AGO4Q9HCK5 861 aaKnown RBP13.87□□□□□ -0.19
EFHC1-239ENST00000638140 GJB4Q9NTQ9 266 aa13.87□□□□□ -0.19
EFHC1-239ENST00000638140 ORC3Q9UBD5 711 aaPredicted RBP13.87□□□□□ -0.19
EFHC1-239ENST00000638140 GTF2IRD1Q9UHL9 959 aa13.87□□□□□ -0.19
EFHC1-239ENST00000638140 KCNJ14Q9UNX9 436 aa13.87□□□□□ -0.19
EFHC1-239ENST00000638140 NOD1Q9Y239 953 aa13.87□□□□□ -0.19
EFHC1-239ENST00000638140 MYH7BA7E2Y1 1941 aa13.87□□□□□ -0.19
EFHC1-239ENST00000638140 EDIL3O43854 480 aa13.86□□□□□ -0.19
EFHC1-239ENST00000638140 FDPSP14324 419 aaKnown RBP13.86□□□□□ -0.19
EFHC1-239ENST00000638140 TCF7P36402 384 aaPredicted RBP13.86□□□□□ -0.19
EFHC1-239ENST00000638140 RBM25P49756 843 aaKnown RBP13.86□□□□□ -0.19
EFHC1-239ENST00000638140 HIC1Q14526 733 aa13.86□□□□□ -0.19
EFHC1-239ENST00000638140 NIPA1Q7RTP0 329 aa13.86□□□□□ -0.19
EFHC1-239ENST00000638140 PLA2G4DQ86XP0 818 aa13.86□□□□□ -0.19
EFHC1-239ENST00000638140 TRIM50Q86XT4 487 aa13.86□□□□□ -0.19
EFHC1-239ENST00000638140 BLIDQ8IZY5 108 aa13.86□□□□□ -0.19
EFHC1-239ENST00000638140 SCLYQ96I15 445 aa13.86□□□□□ -0.19
EFHC1-239ENST00000638140 CTAGE1Q96RT6 745 aa13.86□□□□□ -0.19
EFHC1-239ENST00000638140 WNT8AQ9H1J5 351 aa13.86□□□□□ -0.19
EFHC1-239ENST00000638140 RNPEPQ9H4A4 650 aa13.86□□□□□ -0.19
EFHC1-239ENST00000638140 PCDHA4Q9UN74 947 aa13.86□□□□□ -0.19
EFHC1-239ENST00000638140 LIMCH1Q9UPQ0 1083 aa13.86□□□□□ -0.19
EFHC1-239ENST00000638140 LAMA3Q16787 3333 aa13.85□□□□□ -0.19
EFHC1-239ENST00000638140 IGLV3-22A0A075B6J6 115 aa13.85□□□□□ -0.19
EFHC1-239ENST00000638140 M0R2N6 131 aa13.85□□□□□ -0.19
EFHC1-239ENST00000638140 ITGB3BPQ13352 177 aaPredicted RBP13.85□□□□□ -0.19
EFHC1-239ENST00000638140 PPIGQ13427 754 aaKnown RBP eCLIP13.85□□□□□ -0.19
EFHC1-239ENST00000638140 NPY5RQ15761 445 aa13.85□□□□□ -0.19
EFHC1-239ENST00000638140 ZNF365Q70YC5 407 aa13.85□□□□□ -0.19
EFHC1-239ENST00000638140 RETREG2Q8NC44 543 aa13.85□□□□□ -0.19
EFHC1-239ENST00000638140 GTF3C6Q969F1 213 aa13.85□□□□□ -0.19
EFHC1-239ENST00000638140 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.85□□□□□ -0.19
EFHC1-239ENST00000638140 SDF4Q9BRK5 362 aa13.85□□□□□ -0.19
EFHC1-239ENST00000638140 PHF20Q9BVI0 1012 aa13.85□□□□□ -0.19
EFHC1-239ENST00000638140 SLC9A2Q9UBY0 812 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms