RNA–Protein interactions for RNA: ENST00000637624.1

PXN-222, Transcript of paxillin, human

TSL 2

Gene PXN, Length 4,132 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PXN-222	ENST00000637624	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.25	□□□□□ -0.29
PXN-222	ENST00000637624	CEP120	Q8N960	986 aa		13.25	□□□□□ -0.29
PXN-222	ENST00000637624	ABTB1	Q969K4	478 aa	Predicted RBP	13.25	□□□□□ -0.29
PXN-222	ENST00000637624	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.25	□□□□□ -0.29
PXN-222	ENST00000637624	DAAM1	Q9Y4D1	1078 aa		13.25	□□□□□ -0.29
PXN-222	ENST00000637624	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.25	□□□□□ -0.29
PXN-222	ENST00000637624	PDE6A	P16499	860 aa		13.25	□□□□□ -0.29
PXN-222	ENST00000637624	KRT15	P19012	456 aa		13.25	□□□□□ -0.29
PXN-222	ENST00000637624	CETN2	P41208	172 aa		13.25	□□□□□ -0.29
PXN-222	ENST00000637624	RAD23B	P54727	409 aa		13.25	□□□□□ -0.29
PXN-222	ENST00000637624	SLC8A3	P57103	927 aa		13.25	□□□□□ -0.29
PXN-222	ENST00000637624	INF2	Q27J81	1249 aa		13.25	□□□□□ -0.29
PXN-222	ENST00000637624	VWA3B	Q502W6	1294 aa		13.25	□□□□□ -0.29
PXN-222	ENST00000637624	SEL1L2	Q5TEA6	688 aa		13.25	□□□□□ -0.29
PXN-222	ENST00000637624	RNF168	Q8IYW5	571 aa	Predicted RBP	13.25	□□□□□ -0.29
PXN-222	ENST00000637624	NEK9	Q8TD19	979 aa		13.25	□□□□□ -0.29
PXN-222	ENST00000637624	PLVAP	Q9BX97	442 aa		13.25	□□□□□ -0.29
PXN-222	ENST00000637624	ECT2	Q9H8V3	914 aa		13.25	□□□□□ -0.29
PXN-222	ENST00000637624	TBK1	Q9UHD2	729 aa		13.25	□□□□□ -0.29
PXN-222	ENST00000637624	FAM205C	A6NFA0	338 aa		13.25	□□□□□ -0.29
PXN-222	ENST00000637624	ZC3H18	Q86VM9	953 aa	Known RBP	13.25	□□□□□ -0.29
PXN-222	ENST00000637624	DZIP1	Q86YF9	867 aa	Known RBP	13.25	□□□□□ -0.29
PXN-222	ENST00000637624	SCYL3	Q8IZE3	742 aa		13.25	□□□□□ -0.29
PXN-222	ENST00000637624	RNF217	Q8TC41	542 aa		13.25	□□□□□ -0.29
PXN-222	ENST00000637624	INTU	Q9ULD6	942 aa		13.25	□□□□□ -0.29
PXN-222	ENST00000637624	RASSF10	A6NK89	507 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	CD44	P16070	742 aa	Known RBP	13.24	□□□□□ -0.29
PXN-222	ENST00000637624	PDE6C	P51160	858 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	INTS5	Q6P9B9	1019 aa	Known RBP	13.24	□□□□□ -0.29
PXN-222	ENST00000637624	KDM7A	Q6ZMT4	941 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	FAM47E	Q6ZV65	393 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	TSEN2	Q8NCE0	465 aa	Known RBP	13.24	□□□□□ -0.29
PXN-222	ENST00000637624	P3H4	Q92791	437 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	RPGR	Q92834	1020 aa	Known RBP	13.24	□□□□□ -0.29
PXN-222	ENST00000637624	LRRC27	Q9C0I9	530 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	DAPK3	O43293	454 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	ZNF18	P17022	549 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	HMGB2	P26583	209 aa	Known RBP	13.24	□□□□□ -0.29
PXN-222	ENST00000637624	TBC1D10C	Q8IV04	446 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	TMEM139	Q8IV31	216 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	FAM133A	Q8N9E0	248 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	CAPN11	Q9UMQ6	739 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	HPSE	Q9Y251	543 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	PTPN22	Q9Y2R2	807 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	NWD2	Q9ULI1	1742 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	LRRC53	A6NM62	1247 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	MSH2	P43246	934 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	TNNI2	P48788	182 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	PSEN1	P49768	467 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.24	□□□□□ -0.29
PXN-222	ENST00000637624	PPP4R3A	Q6IN85	833 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	DDX27	Q96GQ7	796 aa	Known RBP	13.24	□□□□□ -0.29
PXN-222	ENST00000637624	NDST4	Q9H3R1	872 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	ATP6V0A4	Q9HBG4	840 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	MAGEB6P1	A0A0J9YX57	407 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	OPLAH	O14841	1288 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	RPS6KA4	O75676	772 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	H2AFZ	P0C0S5	128 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	GNAT2	P19087	354 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	CUL1	Q13616	776 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	MAP7	Q14244	749 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	LRRC41	Q15345	812 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	CAPN12	Q6ZSI9	719 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	H2AFV	Q71UI9	128 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.24	□□□□□ -0.29
PXN-222	ENST00000637624	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.24	□□□□□ -0.29
PXN-222	ENST00000637624	CTTNBP2NL	Q9P2B4	639 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	PNMA2	Q9UL42	364 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	CAPN6	Q9Y6Q1	641 aa		13.24	□□□□□ -0.29
PXN-222	ENST00000637624	RASGRF2	O14827	1237 aa		13.23	□□□□□ -0.29
PXN-222	ENST00000637624	CFAP157	Q5JU67	520 aa		13.23	□□□□□ -0.29
PXN-222	ENST00000637624	HHAT	Q5VTY9	493 aa		13.23	□□□□□ -0.29
PXN-222	ENST00000637624	ZNF579	Q8NAF0	562 aa	Known RBP	13.23	□□□□□ -0.29
PXN-222	ENST00000637624	IQCD	Q96DY2	449 aa		13.23	□□□□□ -0.29
PXN-222	ENST00000637624	NLRP3	Q96P20	1036 aa		13.23	□□□□□ -0.29
PXN-222	ENST00000637624	IQCG	Q9H095	443 aa	Known RBP	13.23	□□□□□ -0.29
PXN-222	ENST00000637624	ZMYND12	Q9H0C1	365 aa		13.23	□□□□□ -0.29
PXN-222	ENST00000637624	VCX3B	Q9H321	246 aa		13.23	□□□□□ -0.29
PXN-222	ENST00000637624	VCX3A	Q9NNX9	186 aa		13.23	□□□□□ -0.29
PXN-222	ENST00000637624	LIMA1	Q9UHB6	759 aa	Known RBP	13.23	□□□□□ -0.29
PXN-222	ENST00000637624	AMACR	Q9UHK6	382 aa		13.23	□□□□□ -0.29
PXN-222	ENST00000637624	CFAP73	A6NFT4	308 aa		13.23	□□□□□ -0.29
PXN-222	ENST00000637624	CCT8L1P	A6NM43	557 aa		13.23	□□□□□ -0.29
PXN-222	ENST00000637624	CAND2	O75155	1236 aa		13.23	□□□□□ -0.29
PXN-222	ENST00000637624	SNUPN	O95149	360 aa	Known RBP	13.23	□□□□□ -0.29
PXN-222	ENST00000637624	SKI	P12755	728 aa		13.23	□□□□□ -0.29
PXN-222	ENST00000637624	CCNE1	P24864	410 aa		13.23	□□□□□ -0.29
PXN-222	ENST00000637624	TEC	P42680	631 aa		13.23	□□□□□ -0.29
PXN-222	ENST00000637624	CTCF	P49711	727 aa	Predicted RBP	13.23	□□□□□ -0.29
PXN-222	ENST00000637624	PLCB4	Q15147	1175 aa		13.23	□□□□□ -0.29
PXN-222	ENST00000637624	PTPA	Q15257	358 aa		13.23	□□□□□ -0.29
PXN-222	ENST00000637624	ANKRD20A3	Q5VUR7	823 aa		13.23	□□□□□ -0.29
PXN-222	ENST00000637624	FYB2	Q5VWT5	728 aa		13.23	□□□□□ -0.29
PXN-222	ENST00000637624	DEFB132	Q7Z7B7	95 aa		13.23	□□□□□ -0.29
PXN-222	ENST00000637624	SDR42E1	Q8WUS8	393 aa		13.23	□□□□□ -0.29
PXN-222	ENST00000637624	CEP63	Q96MT8	703 aa		13.23	□□□□□ -0.29
PXN-222	ENST00000637624	DNAJC17	Q9NVM6	304 aa	Known RBP	13.23	□□□□□ -0.29
PXN-222	ENST00000637624	DDX20	Q9UHI6	824 aa	Known RBP	13.23	□□□□□ -0.29
PXN-222	ENST00000637624	SNX24	Q9Y343	169 aa		13.23	□□□□□ -0.29
PXN-222	ENST00000637624	IKBKG	Q9Y6K9	419 aa		13.23	□□□□□ -0.29

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