RNA–Protein interactions for RNA: ENST00000637439.1

CIITA-215, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-215ENST00000637439 PLEKHG4Q58EX7 1191 aa20.66■□□□□ 0.9
CIITA-215ENST00000637439 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.66■□□□□ 0.9
CIITA-215ENST00000637439 MYOCDQ8IZQ8 938 aa20.66■□□□□ 0.9
CIITA-215ENST00000637439 FBXO22Q8NEZ5 403 aa20.66■□□□□ 0.9
CIITA-215ENST00000637439 NCOA7Q8NI08 942 aa20.66■□□□□ 0.9
CIITA-215ENST00000637439 SEPT8Q92599 483 aa20.66■□□□□ 0.9
CIITA-215ENST00000637439 GPKOWQ92917 476 aaPredicted RBP eCLIP20.66■□□□□ 0.9
CIITA-215ENST00000637439 SAMD11Q96NU1 681 aa20.66■□□□□ 0.9
CIITA-215ENST00000637439 INPP4AQ96PE3 977 aaPredicted RBP20.66■□□□□ 0.9
CIITA-215ENST00000637439 RAPGEFL1Q9UHV5 662 aa20.66■□□□□ 0.9
CIITA-215ENST00000637439 FRMPD4Q14CM0 1322 aa20.66■□□□□ 0.9
CIITA-215ENST00000637439 MICAL3Q7RTP6 2002 aa20.65■□□□□ 0.9
CIITA-215ENST00000637439 CYTH3O43739 400 aa20.65■□□□□ 0.9
CIITA-215ENST00000637439 HTRA4P83105 476 aaPredicted RBP20.65■□□□□ 0.9
CIITA-215ENST00000637439 MKRN4PQ13434 485 aaPredicted RBP20.65■□□□□ 0.9
CIITA-215ENST00000637439 TTC22Q5TAA0 569 aa20.65■□□□□ 0.9
CIITA-215ENST00000637439 METTL7BQ6UX53 244 aa20.65■□□□□ 0.9
CIITA-215ENST00000637439 CATIPQ7Z7H3 387 aa20.65■□□□□ 0.9
CIITA-215ENST00000637439 ZFP91Q96JP5 570 aaPredicted RBP20.65■□□□□ 0.9
CIITA-215ENST00000637439 RNPEPQ9H4A4 650 aa20.65■□□□□ 0.9
CIITA-215ENST00000637439 BAZ2BQ9UIF8 2168 aaKnown RBP20.64■□□□□ 0.89
CIITA-215ENST00000637439 SPATA31C2B4DYI2 1134 aa20.64■□□□□ 0.89
CIITA-215ENST00000637439 FIBPO43427 364 aa20.64■□□□□ 0.89
CIITA-215ENST00000637439 MRPS9P82933 396 aaKnown RBP20.64■□□□□ 0.89
CIITA-215ENST00000637439 SP7Q8TDD2 431 aaPredicted RBP20.64■□□□□ 0.89
CIITA-215ENST00000637439 UBE2ZQ9H832 354 aaPredicted RBP20.64■□□□□ 0.89
CIITA-215ENST00000637439 ZNF215Q9UL58 517 aaPredicted RBP20.64■□□□□ 0.89
CIITA-215ENST00000637439 E7EWF7 191 aa20.63■□□□□ 0.89
CIITA-215ENST00000637439 TREHO43280 583 aa20.63■□□□□ 0.89
CIITA-215ENST00000637439 GSPT1P15170 499 aaKnown RBP20.63■□□□□ 0.89
CIITA-215ENST00000637439 PLA2G5P39877 138 aa20.63■□□□□ 0.89
CIITA-215ENST00000637439 PTPROQ16827 1216 aa20.63■□□□□ 0.89
CIITA-215ENST00000637439 XRRA1Q6P2D8 792 aa20.63■□□□□ 0.89
CIITA-215ENST00000637439 CYFIP1Q7L576 1253 aa20.63■□□□□ 0.89
CIITA-215ENST00000637439 CUL5Q93034 780 aa20.63■□□□□ 0.89
CIITA-215ENST00000637439 MAP3K14Q99558 947 aa20.63■□□□□ 0.89
CIITA-215ENST00000637439 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.62■□□□□ 0.89
CIITA-215ENST00000637439 CHMLP26374 656 aa20.62■□□□□ 0.89
CIITA-215ENST00000637439 PTH1RQ03431 593 aa20.62■□□□□ 0.89
CIITA-215ENST00000637439 GIMAP8Q8ND71 665 aaPredicted RBP20.62■□□□□ 0.89
CIITA-215ENST00000637439 SMARCC2Q8TAQ2 1214 aa20.62■□□□□ 0.89
CIITA-215ENST00000637439 APBB2Q92870 758 aa20.62■□□□□ 0.89
CIITA-215ENST00000637439 TOP1MTQ969P6 601 aa20.62■□□□□ 0.89
CIITA-215ENST00000637439 FAM122AQ96E09 287 aa20.62■□□□□ 0.89
CIITA-215ENST00000637439 YME1L1Q96TA2 773 aa20.62■□□□□ 0.89
CIITA-215ENST00000637439 GPR20Q99678 358 aa20.62■□□□□ 0.89
CIITA-215ENST00000637439 SENP7Q9BQF6 1050 aa20.62■□□□□ 0.89
CIITA-215ENST00000637439 C17orf80Q9BSJ5 609 aa20.62■□□□□ 0.89
CIITA-215ENST00000637439 BCAS3Q9H6U6 928 aa20.62■□□□□ 0.89
CIITA-215ENST00000637439 SENP2Q9HC62 589 aa20.62■□□□□ 0.89
CIITA-215ENST00000637439 SMARCA1P28370 1054 aa20.61■□□□□ 0.89
CIITA-215ENST00000637439 KIF5BP33176 963 aa20.61■□□□□ 0.89
CIITA-215ENST00000637439 LEXMQ3ZCV2 418 aa20.61■□□□□ 0.89
CIITA-215ENST00000637439 PCNX4Q63HM2 1172 aa20.61■□□□□ 0.89
CIITA-215ENST00000637439 CTCFLQ8NI51 663 aaPredicted RBP20.61■□□□□ 0.89
CIITA-215ENST00000637439 MRPL38Q96DV4 380 aaKnown RBP20.61■□□□□ 0.89
CIITA-215ENST00000637439 RRP36Q96EU6 259 aaKnown RBP20.61■□□□□ 0.89
CIITA-215ENST00000637439 SPZ1Q9BXG8 430 aa20.61■□□□□ 0.89
CIITA-215ENST00000637439 EPHX3Q9H6B9 360 aa20.61■□□□□ 0.89
CIITA-215ENST00000637439 SETD4Q9NVD3 440 aa20.61■□□□□ 0.89
CIITA-215ENST00000637439 RTEL1Q9NZ71 1219 aa20.61■□□□□ 0.89
CIITA-215ENST00000637439 ARIH1Q9Y4X5 557 aaPredicted RBP20.61■□□□□ 0.89
CIITA-215ENST00000637439 CTSHP09668 335 aa20.6■□□□□ 0.89
CIITA-215ENST00000637439 PDE4AP27815 886 aa20.6■□□□□ 0.89
CIITA-215ENST00000637439 SEMA3FQ13275 785 aa20.6■□□□□ 0.89
CIITA-215ENST00000637439 EPC2Q52LR7 807 aa20.6■□□□□ 0.89
CIITA-215ENST00000637439 TMEM31Q5JXX7 168 aa20.6■□□□□ 0.89
CIITA-215ENST00000637439 NLRX1Q86UT6 975 aa20.6■□□□□ 0.89
CIITA-215ENST00000637439 IGDCC4Q8TDY8 1250 aa20.6■□□□□ 0.89
CIITA-215ENST00000637439 LRFN3Q9BTN0 628 aa20.6■□□□□ 0.89
CIITA-215ENST00000637439 SEC63Q9UGP8 760 aaKnown RBP20.6■□□□□ 0.89
CIITA-215ENST00000637439 COL4A6Q14031 1691 aa20.6■□□□□ 0.89
CIITA-215ENST00000637439 BRWD1Q9NSI6 2320 aa20.6■□□□□ 0.89
CIITA-215ENST00000637439 PIK3CDO00329 1044 aa20.59■□□□□ 0.89
CIITA-215ENST00000637439 DDAH1O94760 285 aa20.59■□□□□ 0.89
CIITA-215ENST00000637439 TIGD5Q53EQ6 642 aa20.59■□□□□ 0.89
CIITA-215ENST00000637439 FAM26DQ5JW98 314 aa20.59■□□□□ 0.89
CIITA-215ENST00000637439 PIBF1Q8WXW3 757 aa20.59■□□□□ 0.89
CIITA-215ENST00000637439 LZTS2Q9BRK4 669 aa20.59■□□□□ 0.89
CIITA-215ENST00000637439 MTA3Q9BTC8 594 aa20.59■□□□□ 0.89
CIITA-215ENST00000637439 HCN4Q9Y3Q4 1203 aa20.59■□□□□ 0.89
CIITA-215ENST00000637439 NRCAMQ92823 1304 aa20.58■□□□□ 0.89
CIITA-215ENST00000637439 H3BNC9 293 aa20.58■□□□□ 0.89
CIITA-215ENST00000637439 SGSM2O43147 1006 aa20.58■□□□□ 0.89
CIITA-215ENST00000637439 UPP2O95045 317 aa20.58■□□□□ 0.89
CIITA-215ENST00000637439 KCNA5P22460 613 aa20.58■□□□□ 0.89
CIITA-215ENST00000637439 GNAQP50148 359 aa20.58■□□□□ 0.89
CIITA-215ENST00000637439 ADAM17P78536 824 aa20.58■□□□□ 0.89
CIITA-215ENST00000637439 ARHGAP4P98171 946 aa20.58■□□□□ 0.89
CIITA-215ENST00000637439 PUS10Q3MIT2 529 aaKnown RBP20.58■□□□□ 0.89
CIITA-215ENST00000637439 UTP14CQ5TAP6 766 aaKnown RBP20.58■□□□□ 0.89
CIITA-215ENST00000637439 LMBR1Q8WVP7 490 aa20.58■□□□□ 0.89
CIITA-215ENST00000637439 CDHR1Q96JP9 859 aa20.58■□□□□ 0.89
CIITA-215ENST00000637439 YTHDC1Q96MU7 727 aaKnown RBP20.58■□□□□ 0.89
CIITA-215ENST00000637439 IFIH1Q9BYX4 1025 aaKnown RBP20.58■□□□□ 0.89
CIITA-215ENST00000637439 DOCK5Q9H7D0 1870 aa20.58■□□□□ 0.88
CIITA-215ENST00000637439 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.57■□□□□ 0.88
CIITA-215ENST00000637439 GPR37L1O60883 481 aa20.57■□□□□ 0.88
CIITA-215ENST00000637439 ANTXR2P58335 489 aa20.57■□□□□ 0.88
CIITA-215ENST00000637439 USP17L6PQ6QN14 398 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms