RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 NID2Q14112 1375 aa15.79■□□□□ 0.12
PNKP-228ENST00000637325 H3BRB1 525 aa15.79■□□□□ 0.12
PNKP-228ENST00000637325 HAS3O00219 553 aa15.79■□□□□ 0.12
PNKP-228ENST00000637325 PITPNM1O00562 1244 aa15.79■□□□□ 0.12
PNKP-228ENST00000637325 PRPF3O43395 683 aaKnown RBP15.79■□□□□ 0.12
PNKP-228ENST00000637325 LGALS2P05162 132 aa15.79■□□□□ 0.12
PNKP-228ENST00000637325 ITGB5P18084 799 aa15.79■□□□□ 0.12
PNKP-228ENST00000637325 PDIA3P30101 505 aaKnown RBP15.79■□□□□ 0.12
PNKP-228ENST00000637325 RFC2P35250 354 aa15.79■□□□□ 0.12
PNKP-228ENST00000637325 MTMR1Q13613 665 aa15.79■□□□□ 0.12
PNKP-228ENST00000637325 UTP14CQ5TAP6 766 aaKnown RBP15.79■□□□□ 0.12
PNKP-228ENST00000637325 OTOP2Q7RTS6 562 aa15.79■□□□□ 0.12
PNKP-228ENST00000637325 CAGE1Q8TC20 777 aa15.79■□□□□ 0.12
PNKP-228ENST00000637325 HERVK_113Q902F9 699 aa15.79■□□□□ 0.12
PNKP-228ENST00000637325 PHKBQ93100 1093 aa15.79■□□□□ 0.12
PNKP-228ENST00000637325 PGBD1Q96JS3 809 aa15.79■□□□□ 0.12
PNKP-228ENST00000637325 FAM161BQ96MY7 647 aa15.79■□□□□ 0.12
PNKP-228ENST00000637325 GPR20Q99678 358 aa15.79■□□□□ 0.12
PNKP-228ENST00000637325 SLC26A6Q9BXS9 759 aa15.79■□□□□ 0.12
PNKP-228ENST00000637325 ANO3Q9BYT9 981 aa15.79■□□□□ 0.12
PNKP-228ENST00000637325 UPF3BQ9BZI7 483 aaKnown RBP15.79■□□□□ 0.12
PNKP-228ENST00000637325 TUT1Q9H6E5 874 aaKnown RBP15.79■□□□□ 0.12
PNKP-228ENST00000637325 JADE2Q9NQC1 790 aa15.79■□□□□ 0.12
PNKP-228ENST00000637325 PDRG1Q9NUG6 133 aa15.79■□□□□ 0.12
PNKP-228ENST00000637325 MTMR10Q9NXD2 777 aa15.79■□□□□ 0.12
PNKP-228ENST00000637325 PKD2L1Q9P0L9 805 aa15.79■□□□□ 0.12
PNKP-228ENST00000637325 UBIAD1Q9Y5Z9 338 aa15.79■□□□□ 0.12
PNKP-228ENST00000637325 ZBBXA8MT70 800 aa15.78■□□□□ 0.12
PNKP-228ENST00000637325 MAFGO15525 162 aa15.78■□□□□ 0.12
PNKP-228ENST00000637325 EIF5BO60841 1220 aaKnown RBP15.78■□□□□ 0.12
PNKP-228ENST00000637325 PFKMP08237 780 aa15.78■□□□□ 0.12
PNKP-228ENST00000637325 IQCF3P0C7M6 154 aa15.78■□□□□ 0.12
PNKP-228ENST00000637325 ZNF76P36508 570 aa15.78■□□□□ 0.12
PNKP-228ENST00000637325 AP3B2Q13367 1082 aa15.78■□□□□ 0.12
PNKP-228ENST00000637325 TOB2Q14106 344 aaPredicted RBP15.78■□□□□ 0.12
PNKP-228ENST00000637325 JAKMIP3Q5VZ66 844 aa15.78■□□□□ 0.12
PNKP-228ENST00000637325 C16orf70Q9BSU1 422 aa15.78■□□□□ 0.12
PNKP-228ENST00000637325 FTOQ9C0B1 505 aaKnown RBP eCLIP15.78■□□□□ 0.12
PNKP-228ENST00000637325 C6orf50Q9HD87 102 aa15.78■□□□□ 0.12
PNKP-228ENST00000637325 TMEM260Q9NX78 707 aa15.78■□□□□ 0.12
PNKP-228ENST00000637325 ZNF215Q9UL58 517 aaPredicted RBP15.78■□□□□ 0.12
PNKP-228ENST00000637325 C17orf102A2RUQ5 167 aa15.77■□□□□ 0.12
PNKP-228ENST00000637325 CPLX1O14810 134 aa15.77■□□□□ 0.12
PNKP-228ENST00000637325 ATP9AO75110 1047 aa15.77■□□□□ 0.12
PNKP-228ENST00000637325 ACTN1P12814 892 aa15.77■□□□□ 0.12
PNKP-228ENST00000637325 KCNA2P16389 499 aa15.77■□□□□ 0.12
PNKP-228ENST00000637325 IFNAR1P17181 557 aa15.77■□□□□ 0.12
PNKP-228ENST00000637325 EVCP57679 992 aa15.77■□□□□ 0.12
PNKP-228ENST00000637325 TRIM22Q8IYM9 498 aa15.77■□□□□ 0.12
PNKP-228ENST00000637325 AFAP1L1Q8TED9 768 aa15.77■□□□□ 0.12
PNKP-228ENST00000637325 MXRA8Q9BRK3 442 aa15.77■□□□□ 0.12
PNKP-228ENST00000637325 LARP6Q9BRS8 491 aaKnown RBP15.77■□□□□ 0.12
PNKP-228ENST00000637325 RNF26Q9BY78 433 aaPredicted RBP15.77■□□□□ 0.12
PNKP-228ENST00000637325 NCOA5Q9HCD5 579 aaKnown RBP15.77■□□□□ 0.12
PNKP-228ENST00000637325 WDR81Q562E7 1941 aa15.76■□□□□ 0.11
PNKP-228ENST00000637325 PPFIA3O75145 1194 aa15.76■□□□□ 0.11
PNKP-228ENST00000637325 SELPP16109 830 aa15.76■□□□□ 0.11
PNKP-228ENST00000637325 GNA11P29992 359 aa15.76■□□□□ 0.11
PNKP-228ENST00000637325 ZNF200P98182 395 aaPredicted RBP15.76■□□□□ 0.11
PNKP-228ENST00000637325 SSRP1Q08945 709 aaKnown RBP15.76■□□□□ 0.11
PNKP-228ENST00000637325 PTK7Q13308 1070 aa15.76■□□□□ 0.11
PNKP-228ENST00000637325 PKN1Q16512 942 aa15.76■□□□□ 0.11
PNKP-228ENST00000637325 RASIP1Q5U651 963 aa15.76■□□□□ 0.11
PNKP-228ENST00000637325 MCTP2Q6DN12 878 aa15.76■□□□□ 0.11
PNKP-228ENST00000637325 CPLX2Q6PUV4 134 aaKnown RBP15.76■□□□□ 0.11
PNKP-228ENST00000637325 CCDC148Q8NFR7 591 aa15.76■□□□□ 0.11
PNKP-228ENST00000637325 SEPT1Q8WYJ6 367 aa15.76■□□□□ 0.11
PNKP-228ENST00000637325 ZNF274Q96GC6 653 aaPredicted RBP15.76■□□□□ 0.11
PNKP-228ENST00000637325 SDF4Q9BRK5 362 aa15.76■□□□□ 0.11
PNKP-228ENST00000637325 ZMYND12Q9H0C1 365 aa15.76■□□□□ 0.11
PNKP-228ENST00000637325 SEMA6BQ9H3T3 888 aa15.76■□□□□ 0.11
PNKP-228ENST00000637325 CXXC1Q9P0U4 656 aaPredicted RBP15.76■□□□□ 0.11
PNKP-228ENST00000637325 SLC4A7Q9Y6M7 1214 aa15.76■□□□□ 0.11
PNKP-228ENST00000637325 ESYT2A0FGR8 921 aa15.75■□□□□ 0.11
PNKP-228ENST00000637325 GRXCR1A8MXD5 290 aa15.75■□□□□ 0.11
PNKP-228ENST00000637325 SMIM10L2AP0DMW4 78 aa15.75■□□□□ 0.11
PNKP-228ENST00000637325 SMIM10L2BP0DMW5 78 aa15.75■□□□□ 0.11
PNKP-228ENST00000637325 GNAT1P11488 350 aa15.75■□□□□ 0.11
PNKP-228ENST00000637325 DNAJB2P25686 324 aa15.75■□□□□ 0.11
PNKP-228ENST00000637325 TCF7P36402 384 aaPredicted RBP15.75■□□□□ 0.11
PNKP-228ENST00000637325 SREBF1P36956 1147 aa15.75■□□□□ 0.11
PNKP-228ENST00000637325 CLK2P49760 499 aaKnown RBP15.75■□□□□ 0.11
PNKP-228ENST00000637325 STK3Q13188 491 aa15.75■□□□□ 0.11
PNKP-228ENST00000637325 NTRK3Q16288 839 aa15.75■□□□□ 0.11
PNKP-228ENST00000637325 CEP55Q53EZ4 464 aa15.75■□□□□ 0.11
PNKP-228ENST00000637325 LRRC8DQ7L1W4 858 aa15.75■□□□□ 0.11
PNKP-228ENST00000637325 REXO1Q8N1G1 1221 aaKnown RBP15.75■□□□□ 0.11
PNKP-228ENST00000637325 BICD2Q8TD16 824 aa15.75■□□□□ 0.11
PNKP-228ENST00000637325 DHX38Q92620 1227 aaKnown RBP15.75■□□□□ 0.11
PNKP-228ENST00000637325 ATP6V0A1Q93050 837 aa15.75■□□□□ 0.11
PNKP-228ENST00000637325 CTAGE1Q96RT6 745 aa15.75■□□□□ 0.11
PNKP-228ENST00000637325 KCNH7Q9NS40 1196 aa15.75■□□□□ 0.11
PNKP-228ENST00000637325 MSRAQ9UJ68 235 aa15.75■□□□□ 0.11
PNKP-228ENST00000637325 EVPLQ92817 2033 aa15.74■□□□□ 0.11
PNKP-228ENST00000637325 TMEM265A0A087WTH1 108 aa15.74■□□□□ 0.11
PNKP-228ENST00000637325 PARNO95453 639 aaKnown RBP15.74■□□□□ 0.11
PNKP-228ENST00000637325 CKBP12277 381 aa15.74■□□□□ 0.11
PNKP-228ENST00000637325 ANAPC15P60006 121 aa15.74■□□□□ 0.11
PNKP-228ENST00000637325 ARHGAP4P98171 946 aa15.74■□□□□ 0.11
PNKP-228ENST00000637325 TRIM50Q86XT4 487 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms