RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 SEMA3FQ13275 785 aa15.07■□□□□ 0
LINC00643-207ENST00000637212 NEDD9Q14511 834 aa15.07■□□□□ 0
LINC00643-207ENST00000637212 SPECC1Q5M775 1068 aa15.07■□□□□ 0
LINC00643-207ENST00000637212 USP49Q70CQ1 688 aa15.07■□□□□ 0
LINC00643-207ENST00000637212 RDM1Q8NG50 284 aa15.07■□□□□ 0
LINC00643-207ENST00000637212 SYAP1Q96A49 352 aaPredicted RBP15.07■□□□□ 0
LINC00643-207ENST00000637212 ERO1AQ96HE7 468 aa15.07■□□□□ 0
LINC00643-207ENST00000637212 APBA2Q99767 749 aa15.07■□□□□ 0
LINC00643-207ENST00000637212 ANP32EQ9BTT0 268 aa15.07■□□□□ 0
LINC00643-207ENST00000637212 BEGAINQ9BUH8 593 aa15.07■□□□□ 0
LINC00643-207ENST00000637212 DDX19AQ9NUU7 478 aaKnown RBP15.07■□□□□ 0
LINC00643-207ENST00000637212 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.07■□□□□ 0
LINC00643-207ENST00000637212 CCDC39Q9UFE4 941 aa15.07■□□□□ 0
LINC00643-207ENST00000637212 FKTNO75072 461 aa15.06■□□□□ 0
LINC00643-207ENST00000637212 ATP9AO75110 1047 aa15.06■□□□□ 0
LINC00643-207ENST00000637212 NR1I2O75469 434 aa15.06■□□□□ 0
LINC00643-207ENST00000637212 ZNF202O95125 648 aa15.06■□□□□ 0
LINC00643-207ENST00000637212 SNAI1O95863 264 aaPredicted RBP15.06■□□□□ 0
LINC00643-207ENST00000637212 KCNA2P16389 499 aa15.06■□□□□ 0
LINC00643-207ENST00000637212 MUTP22033 750 aa15.06■□□□□ 0
LINC00643-207ENST00000637212 KRT76Q01546 638 aa15.06■□□□□ 0
LINC00643-207ENST00000637212 ITGB3BPQ13352 177 aaPredicted RBP15.06■□□□□ 0
LINC00643-207ENST00000637212 EPHA7Q15375 998 aa15.06■□□□□ 0
LINC00643-207ENST00000637212 TPRNQ4KMQ1 711 aa15.06■□□□□ 0
LINC00643-207ENST00000637212 IQSEC1Q6DN90 963 aa15.06■□□□□ 0
LINC00643-207ENST00000637212 SEPT14Q6ZU15 432 aa15.06■□□□□ 0
LINC00643-207ENST00000637212 CABP7Q86V35 215 aa15.06■□□□□ 0
LINC00643-207ENST00000637212 IQUBQ8NA54 791 aa15.06■□□□□ 0
LINC00643-207ENST00000637212 GJA10Q969M2 543 aa15.06■□□□□ 0
LINC00643-207ENST00000637212 CALML4Q96GE6 196 aa15.06■□□□□ 0
LINC00643-207ENST00000637212 POLR3CQ9BUI4 534 aaPredicted RBP15.06■□□□□ 0
LINC00643-207ENST00000637212 ABHD16BQ9H3Z7 469 aa15.06■□□□□ 0
LINC00643-207ENST00000637212 DACT1Q9NYF0 836 aa15.06■□□□□ 0
LINC00643-207ENST00000637212 THSD7BQ9C0I4 1608 aa15.06■□□□□ 0
LINC00643-207ENST00000637212 KINO60870 393 aaKnown RBP15.05■□□□□ -0
LINC00643-207ENST00000637212 CYP2B6P20813 491 aa15.05■□□□□ -0
LINC00643-207ENST00000637212 SFNP31947 248 aa15.05■□□□□ -0
LINC00643-207ENST00000637212 TTLL4Q14679 1199 aa15.05■□□□□ -0
LINC00643-207ENST00000637212 HYIQ5T013 277 aa15.05■□□□□ -0
LINC00643-207ENST00000637212 HAUS3Q68CZ6 603 aa15.05■□□□□ -0
LINC00643-207ENST00000637212 ZNF746Q6NUN9 644 aaPredicted RBP15.05■□□□□ -0
LINC00643-207ENST00000637212 TAPT1Q6NXT6 567 aa15.05■□□□□ -0
LINC00643-207ENST00000637212 KANK3Q6NY19 840 aa15.05■□□□□ -0
LINC00643-207ENST00000637212 CCDC62Q6P9F0 684 aa15.05■□□□□ -0
LINC00643-207ENST00000637212 SCFD2Q8WU76 684 aa15.05■□□□□ -0
LINC00643-207ENST00000637212 CCDC34Q96HJ3 373 aa15.05■□□□□ -0
LINC00643-207ENST00000637212 HSD17B14Q9BPX1 270 aa15.05■□□□□ -0
LINC00643-207ENST00000637212 MMTAG2Q9BU76 263 aaKnown RBP15.05■□□□□ -0
LINC00643-207ENST00000637212 KATNBL1Q9H079 304 aa15.05■□□□□ -0
LINC00643-207ENST00000637212 UNC45AQ9H3U1 944 aa15.05■□□□□ -0
LINC00643-207ENST00000637212 WBP1LQ9NX94 342 aa15.05■□□□□ -0
LINC00643-207ENST00000637212 TCEAL9Q9UHQ7 104 aa15.05■□□□□ -0
LINC00643-207ENST00000637212 NRBP1Q9UHY1 535 aa15.05■□□□□ -0
LINC00643-207ENST00000637212 DDX41Q9UJV9 622 aaKnown RBP15.05■□□□□ -0
LINC00643-207ENST00000637212 POLR2DO15514 142 aaKnown RBP15.04■□□□□ -0
LINC00643-207ENST00000637212 LETM1O95202 739 aaPredicted RBP15.04■□□□□ -0
LINC00643-207ENST00000637212 SLFN14P0C7P3 912 aa15.04■□□□□ -0
LINC00643-207ENST00000637212 RPA1P27694 616 aa15.04■□□□□ -0
LINC00643-207ENST00000637212 CDC25AP30304 524 aa15.04■□□□□ -0
LINC00643-207ENST00000637212 FLT3LGP49771 235 aa15.04■□□□□ -0
LINC00643-207ENST00000637212 JAK3P52333 1124 aa15.04■□□□□ -0
LINC00643-207ENST00000637212 PRMT2P55345 433 aa15.04■□□□□ -0
LINC00643-207ENST00000637212 SP2Q02086 613 aa15.04■□□□□ -0
LINC00643-207ENST00000637212 ACVR2BQ13705 512 aa15.04■□□□□ -0
LINC00643-207ENST00000637212 RRAGBQ5VZM2 374 aa15.04■□□□□ -0
LINC00643-207ENST00000637212 NCAPH2Q6IBW4 605 aa15.04■□□□□ -0
LINC00643-207ENST00000637212 SMAP1Q8IYB5 467 aaPredicted RBP15.04■□□□□ -0
LINC00643-207ENST00000637212 NEK9Q8TD19 979 aa15.04■□□□□ -0
LINC00643-207ENST00000637212 UIMC1Q96RL1 719 aa15.04■□□□□ -0
LINC00643-207ENST00000637212 ARHGAP39Q9C0H5 1083 aa15.04■□□□□ -0
LINC00643-207ENST00000637212 NT5C3AQ9H0P0 336 aa15.04■□□□□ -0
LINC00643-207ENST00000637212 CUEDC2Q9H467 287 aa15.04■□□□□ -0
LINC00643-207ENST00000637212 TUFT1Q9NNX1 390 aa15.04■□□□□ -0
LINC00643-207ENST00000637212 KDM3AQ9Y4C1 1321 aa15.03■□□□□ -0
LINC00643-207ENST00000637212 POTEMA6NI47 508 aa15.03■□□□□ -0
LINC00643-207ENST00000637212 PP2D1A8MPX8 630 aa15.03■□□□□ -0
LINC00643-207ENST00000637212 WDR64B1ANS9 1081 aa15.03■□□□□ -0
LINC00643-207ENST00000637212 EML1O00423 815 aa15.03■□□□□ -0
LINC00643-207ENST00000637212 CTAGE5O15320 804 aa15.03■□□□□ -0
LINC00643-207ENST00000637212 CAPN15O75808 1086 aa15.03■□□□□ -0
LINC00643-207ENST00000637212 CCT6AP40227 531 aaKnown RBP15.03■□□□□ -0
LINC00643-207ENST00000637212 LONRF3Q496Y0 759 aa15.03■□□□□ -0
LINC00643-207ENST00000637212 CCDC183Q5T5S1 534 aa15.03■□□□□ -0
LINC00643-207ENST00000637212 EEPD1Q7L9B9 569 aa15.03■□□□□ -0
LINC00643-207ENST00000637212 MIER3Q7Z3K6 550 aa15.03■□□□□ -0
LINC00643-207ENST00000637212 SNX29Q8TEQ0 813 aa15.03■□□□□ -0
LINC00643-207ENST00000637212 EIF2AK1Q9BQI3 630 aaKnown RBP15.03■□□□□ -0
LINC00643-207ENST00000637212 PANK2Q9BZ23 570 aa15.03■□□□□ -0
LINC00643-207ENST00000637212 CLSTN2Q9H4D0 955 aa15.03■□□□□ -0
LINC00643-207ENST00000637212 JPH1Q9HDC5 661 aaPredicted RBP15.03■□□□□ -0
LINC00643-207ENST00000637212 DISC1Q9NRI5 854 aa15.03■□□□□ -0
LINC00643-207ENST00000637212 SLC9A2Q9UBY0 812 aa15.03■□□□□ -0
LINC00643-207ENST00000637212 SRRDQ9UH36 339 aa15.03■□□□□ -0
LINC00643-207ENST00000637212 HOOK1Q9UJC3 728 aaKnown RBP15.03■□□□□ -0
LINC00643-207ENST00000637212 NKRFO15226 690 aaKnown RBP eCLIP15.02■□□□□ -0
LINC00643-207ENST00000637212 SLITRK3O94933 977 aa15.02■□□□□ -0
LINC00643-207ENST00000637212 ATG7O95352 703 aa15.02■□□□□ -0
LINC00643-207ENST00000637212 P4HBP07237 508 aaKnown RBP15.02■□□□□ -0
LINC00643-207ENST00000637212 SPATA31C1P0DKV0 1188 aa15.02■□□□□ -0
LINC00643-207ENST00000637212 TXNP10599 105 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms