RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 KIAA0895Q8NCT3 520 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 ATP6V0A4Q9HBG4 840 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 H0YGN5 161 aa17.1■□□□□ 0.33
CACNA1A-235ENST00000637004 PDHBP11177 359 aa17.1■□□□□ 0.33
CACNA1A-235ENST00000637004 LRRC63Q05C16 580 aa17.1■□□□□ 0.33
CACNA1A-235ENST00000637004 EHHADHQ08426 723 aa17.1■□□□□ 0.33
CACNA1A-235ENST00000637004 ZNF844Q08AG5 666 aa17.1■□□□□ 0.33
CACNA1A-235ENST00000637004 INF2Q27J81 1249 aa17.1■□□□□ 0.33
CACNA1A-235ENST00000637004 KLHL7Q8IXQ5 586 aa17.1■□□□□ 0.33
CACNA1A-235ENST00000637004 SWAP70Q9UH65 585 aa17.1■□□□□ 0.33
CACNA1A-235ENST00000637004 TMEM59LQ9UK28 342 aa17.1■□□□□ 0.33
CACNA1A-235ENST00000637004 NFS1Q9Y697 457 aa17.1■□□□□ 0.33
CACNA1A-235ENST00000637004 MYH3P11055 1940 aa17.1■□□□□ 0.33
CACNA1A-235ENST00000637004 M0R2N6 131 aa17.1■□□□□ 0.33
CACNA1A-235ENST00000637004 SSBP05455 408 aaKnown RBP eCLIP17.1■□□□□ 0.33
CACNA1A-235ENST00000637004 GHRP10912 638 aa17.1■□□□□ 0.33
CACNA1A-235ENST00000637004 TRADDQ15628 312 aa17.1■□□□□ 0.33
CACNA1A-235ENST00000637004 SFMBT2Q5VUG0 894 aa17.1■□□□□ 0.33
CACNA1A-235ENST00000637004 DAGLBQ8NCG7 672 aa17.1■□□□□ 0.33
CACNA1A-235ENST00000637004 KDM4CQ9H3R0 1056 aa17.1■□□□□ 0.33
CACNA1A-235ENST00000637004 SLC39A2Q9NP94 309 aa17.1■□□□□ 0.33
CACNA1A-235ENST00000637004 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-235ENST00000637004 ZPR1O75312 459 aa17.09■□□□□ 0.33
CACNA1A-235ENST00000637004 HOXA7P31268 230 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-235ENST00000637004 TXNRD1Q16881 649 aa17.09■□□□□ 0.33
CACNA1A-235ENST00000637004 FAM228AQ86W67 206 aa17.09■□□□□ 0.33
CACNA1A-235ENST00000637004 PROM2Q8N271 834 aa17.09■□□□□ 0.33
CACNA1A-235ENST00000637004 GPKOWQ92917 476 aaPredicted RBP eCLIP17.09■□□□□ 0.33
CACNA1A-235ENST00000637004 SLC4A9Q96Q91 983 aa17.09■□□□□ 0.33
CACNA1A-235ENST00000637004 CEP72Q9P209 647 aa17.09■□□□□ 0.33
CACNA1A-235ENST00000637004 PCDHA6Q9UN73 950 aa17.09■□□□□ 0.33
CACNA1A-235ENST00000637004 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.09■□□□□ 0.33
CACNA1A-235ENST00000637004 PCDHA8Q9Y5H6 950 aa17.09■□□□□ 0.33
CACNA1A-235ENST00000637004 DNAJC8O75937 253 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-235ENST00000637004 ERVK-9P63128 1117 aa17.09■□□□□ 0.33
CACNA1A-235ENST00000637004 CPLX4Q7Z7G2 160 aa17.09■□□□□ 0.33
CACNA1A-235ENST00000637004 FMNL3Q8IVF7 1028 aa17.09■□□□□ 0.33
CACNA1A-235ENST00000637004 TATDN2Q93075 761 aa17.09■□□□□ 0.33
CACNA1A-235ENST00000637004 OR52Z1P0C646 297 aa17.08■□□□□ 0.33
CACNA1A-235ENST00000637004 KLRC1P26715 233 aa17.08■□□□□ 0.33
CACNA1A-235ENST00000637004 CLNS1AP54105 237 aaKnown RBP17.08■□□□□ 0.33
CACNA1A-235ENST00000637004 SATB1Q01826 763 aa17.08■□□□□ 0.33
CACNA1A-235ENST00000637004 QPCTQ16769 361 aa17.08■□□□□ 0.33
CACNA1A-235ENST00000637004 TMC4Q7Z404 712 aa17.08■□□□□ 0.33
CACNA1A-235ENST00000637004 GPIHBP1Q8IV16 184 aa17.08■□□□□ 0.33
CACNA1A-235ENST00000637004 STAG2Q8N3U4 1231 aa17.08■□□□□ 0.33
CACNA1A-235ENST00000637004 GUF1Q8N442 669 aaKnown RBP17.08■□□□□ 0.33
CACNA1A-235ENST00000637004 LRRC4BQ9NT99 713 aa17.08■□□□□ 0.33
CACNA1A-235ENST00000637004 WNK3Q9BYP7 1800 aa17.08■□□□□ 0.32
CACNA1A-235ENST00000637004 PVALEFA0A1B0GWK0 134 aa17.08■□□□□ 0.32
CACNA1A-235ENST00000637004 USP17L12C9JPN9 530 aa17.08■□□□□ 0.32
CACNA1A-235ENST00000637004 USP17L21D6R901 530 aa17.08■□□□□ 0.32
CACNA1A-235ENST00000637004 MGRN1O60291 552 aa17.08■□□□□ 0.32
CACNA1A-235ENST00000637004 NMT2O60551 498 aa17.08■□□□□ 0.32
CACNA1A-235ENST00000637004 TMOD1P28289 359 aa17.08■□□□□ 0.32
CACNA1A-235ENST00000637004 RNASE9P60153 205 aaKnown RBP17.08■□□□□ 0.32
CACNA1A-235ENST00000637004 RPS6KA1Q15418 735 aa17.08■□□□□ 0.32
CACNA1A-235ENST00000637004 RAPGEF5Q92565 580 aa17.08■□□□□ 0.32
CACNA1A-235ENST00000637004 CALML4Q96GE6 196 aa17.08■□□□□ 0.32
CACNA1A-235ENST00000637004 TANGO6Q9C0B7 1094 aa17.08■□□□□ 0.32
CACNA1A-235ENST00000637004 ECHS1P30084 290 aa17.07■□□□□ 0.32
CACNA1A-235ENST00000637004 GNAQP50148 359 aa17.07■□□□□ 0.32
CACNA1A-235ENST00000637004 UAP1Q16222 522 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-235ENST00000637004 SLC18A3Q16572 532 aa17.07■□□□□ 0.32
CACNA1A-235ENST00000637004 KIAA0753Q2KHM9 967 aa17.07■□□□□ 0.32
CACNA1A-235ENST00000637004 OR2W6PQ8NHA6 318 aa17.07■□□□□ 0.32
CACNA1A-235ENST00000637004 HVCN1Q96D96 273 aa17.07■□□□□ 0.32
CACNA1A-235ENST00000637004 PBKQ96KB5 322 aa17.07■□□□□ 0.32
CACNA1A-235ENST00000637004 CALR3Q96L12 384 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-235ENST00000637004 CNOT10Q9H9A5 744 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-235ENST00000637004 ATP6V0A2Q9Y487 856 aa17.07■□□□□ 0.32
CACNA1A-235ENST00000637004 BCL9O00512 1426 aa17.07■□□□□ 0.32
CACNA1A-235ENST00000637004 MSL1Q68DK7 614 aa17.07■□□□□ 0.32
CACNA1A-235ENST00000637004 SV2BQ7L1I2 683 aa17.07■□□□□ 0.32
CACNA1A-235ENST00000637004 HPS3Q969F9 1004 aa17.07■□□□□ 0.32
CACNA1A-235ENST00000637004 TSG101Q99816 390 aa17.07■□□□□ 0.32
CACNA1A-235ENST00000637004 IBSPP21815 317 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 IGHMBP2P38935 993 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 SPRED3Q2MJR0 410 aa17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 FAM47AQ5JRC9 791 aa17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 UNC13DQ70J99 1090 aa17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 UBLCP1Q8WVY7 318 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 CCT6BQ92526 530 aa17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 NLRC4Q9NPP4 1024 aa17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 NOVA2Q9UNW9 492 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 BAZ2BQ9UIF8 2168 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 CCDC189A1A4V9 331 aa17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 KCNK3O14649 394 aa17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 DYNLL1P63167 89 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 E2F5Q15329 346 aa17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 FAM83BQ5T0W9 1011 aa17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 FOXR2Q6PJQ5 311 aa17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 SCFD2Q8WU76 684 aa17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 ANKS1AQ92625 1134 aa17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 FAM212AQ96EL1 285 aa17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 PACSIN2Q9UNF0 486 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 DLEC1Q9Y238 1755 aa17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 TSPY2A6NKD2 308 aa17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 GBP2P32456 591 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-235ENST00000637004 TLDC1Q6P9B6 456 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms