RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 RTEL1Q9NZ71 1219 aa17.88■□□□□ 0.45
LINC00339-209ENST00000635450 GTF2IRD1Q9UHL9 959 aa17.88■□□□□ 0.45
LINC00339-209ENST00000635450 TRANK1O15050 2925 aa17.88■□□□□ 0.45
LINC00339-209ENST00000635450 MICAL3Q7RTP6 2002 aa17.88■□□□□ 0.45
LINC00339-209ENST00000635450 ADD1P35611 737 aaKnown RBP17.87■□□□□ 0.45
LINC00339-209ENST00000635450 AKAP17AQ02040 695 aaKnown RBP17.87■□□□□ 0.45
LINC00339-209ENST00000635450 TOB2Q14106 344 aaPredicted RBP17.87■□□□□ 0.45
LINC00339-209ENST00000635450 FAM217BQ9NTX9 383 aaPredicted RBP17.87■□□□□ 0.45
LINC00339-209ENST00000635450 NOD1Q9Y239 953 aa17.87■□□□□ 0.45
LINC00339-209ENST00000635450 SLC4A7Q9Y6M7 1214 aa17.87■□□□□ 0.45
LINC00339-209ENST00000635450 V9GY48 417 aaPredicted RBP17.87■□□□□ 0.45
LINC00339-209ENST00000635450 NID2Q14112 1375 aa17.87■□□□□ 0.45
LINC00339-209ENST00000635450 hCG_1984214I3L0E3 225 aa17.86■□□□□ 0.45
LINC00339-209ENST00000635450 ARHGEF15O94989 841 aa17.86■□□□□ 0.45
LINC00339-209ENST00000635450 PDIA3P30101 505 aaKnown RBP17.86■□□□□ 0.45
LINC00339-209ENST00000635450 EVCP57679 992 aa17.86■□□□□ 0.45
LINC00339-209ENST00000635450 ADGRE1Q14246 886 aa17.86■□□□□ 0.45
LINC00339-209ENST00000635450 UBE2SQ16763 222 aa17.86■□□□□ 0.45
LINC00339-209ENST00000635450 TRIM50Q86XT4 487 aa17.86■□□□□ 0.45
LINC00339-209ENST00000635450 RPUSD2Q8IZ73 545 aaKnown RBP17.86■□□□□ 0.45
LINC00339-209ENST00000635450 ZNF713Q8N859 430 aaPredicted RBP17.86■□□□□ 0.45
LINC00339-209ENST00000635450 INPP4AQ96PE3 977 aaPredicted RBP17.86■□□□□ 0.45
LINC00339-209ENST00000635450 C16orf70Q9BSU1 422 aa17.86■□□□□ 0.45
LINC00339-209ENST00000635450 PSTPIP2Q9H939 334 aa17.86■□□□□ 0.45
LINC00339-209ENST00000635450 PIK3CDO00329 1044 aa17.85■□□□□ 0.45
LINC00339-209ENST00000635450 SEC24BO95487 1268 aa17.85■□□□□ 0.45
LINC00339-209ENST00000635450 NAPAP54920 295 aa17.85■□□□□ 0.45
LINC00339-209ENST00000635450 CCT2P78371 535 aaKnown RBP17.85■□□□□ 0.45
LINC00339-209ENST00000635450 FUT2Q10981 343 aa17.85■□□□□ 0.45
LINC00339-209ENST00000635450 BFSP2Q13515 415 aa17.85■□□□□ 0.45
LINC00339-209ENST00000635450 MBTPS1Q14703 1052 aa17.85■□□□□ 0.45
LINC00339-209ENST00000635450 RAB30Q15771 203 aa17.85■□□□□ 0.45
LINC00339-209ENST00000635450 TRIM71Q2Q1W2 868 aaKnown RBP17.85■□□□□ 0.45
LINC00339-209ENST00000635450 TYW1BQ6NUM6 668 aa17.85■□□□□ 0.45
LINC00339-209ENST00000635450 TRAF7Q6Q0C0 670 aa17.85■□□□□ 0.45
LINC00339-209ENST00000635450 TMCO2Q7Z6W1 182 aaPredicted RBP17.85■□□□□ 0.45
LINC00339-209ENST00000635450 KAT6AQ92794 2004 aa17.85■□□□□ 0.45
LINC00339-209ENST00000635450 ZNF274Q96GC6 653 aaPredicted RBP17.85■□□□□ 0.45
LINC00339-209ENST00000635450 MTIF3Q9H2K0 278 aaKnown RBP17.85■□□□□ 0.45
LINC00339-209ENST00000635450 TTC28Q96AY4 2481 aa17.84■□□□□ 0.45
LINC00339-209ENST00000635450 LGALS2P05162 132 aa17.84■□□□□ 0.45
LINC00339-209ENST00000635450 PFKMP08237 780 aa17.84■□□□□ 0.45
LINC00339-209ENST00000635450 ATP2A2P16615 1042 aaKnown RBP17.84■□□□□ 0.45
LINC00339-209ENST00000635450 C8orf34Q49A92 452 aa17.84■□□□□ 0.45
LINC00339-209ENST00000635450 WWC2Q6AWC2 1192 aa17.84■□□□□ 0.45
LINC00339-209ENST00000635450 PPP1R18Q6NYC8 613 aa17.84■□□□□ 0.45
LINC00339-209ENST00000635450 SPRED2Q7Z698 418 aa17.84■□□□□ 0.45
LINC00339-209ENST00000635450 C7orf31Q8N865 590 aa17.84■□□□□ 0.45
LINC00339-209ENST00000635450 PRDM6Q9NQX0 595 aa17.84■□□□□ 0.45
LINC00339-209ENST00000635450 MSRAQ9UJ68 235 aa17.84■□□□□ 0.45
LINC00339-209ENST00000635450 PRRC2BQ5JSZ5 2229 aaKnown RBP17.84■□□□□ 0.45
LINC00339-209ENST00000635450 SPATA31C2B4DYI2 1134 aa17.83■□□□□ 0.44
LINC00339-209ENST00000635450 CPLX1O14810 134 aa17.83■□□□□ 0.44
LINC00339-209ENST00000635450 NBNO60934 754 aa17.83■□□□□ 0.44
LINC00339-209ENST00000635450 CKBP12277 381 aa17.83■□□□□ 0.44
LINC00339-209ENST00000635450 ICAM3P32942 547 aa17.83■□□□□ 0.44
LINC00339-209ENST00000635450 RFC2P35250 354 aa17.83■□□□□ 0.44
LINC00339-209ENST00000635450 SP4Q02446 784 aa17.83■□□□□ 0.44
LINC00339-209ENST00000635450 RBL2Q08999 1139 aa17.83■□□□□ 0.44
LINC00339-209ENST00000635450 ANKRD1Q15327 319 aa17.83■□□□□ 0.44
LINC00339-209ENST00000635450 PCNX4Q63HM2 1172 aa17.83■□□□□ 0.44
LINC00339-209ENST00000635450 KCNV1Q6PIU1 500 aa17.83■□□□□ 0.44
LINC00339-209ENST00000635450 CPLX2Q6PUV4 134 aaKnown RBP17.83■□□□□ 0.44
LINC00339-209ENST00000635450 LRRC8DQ7L1W4 858 aa17.83■□□□□ 0.44
LINC00339-209ENST00000635450 CYFIP1Q7L576 1253 aa17.83■□□□□ 0.44
LINC00339-209ENST00000635450 RETREG2Q8NC44 543 aa17.83■□□□□ 0.44
LINC00339-209ENST00000635450 CAGE1Q8TC20 777 aa17.83■□□□□ 0.44
LINC00339-209ENST00000635450 AFAP1L1Q8TED9 768 aa17.83■□□□□ 0.44
LINC00339-209ENST00000635450 LARP6Q9BRS8 491 aaKnown RBP17.83■□□□□ 0.44
LINC00339-209ENST00000635450 KATNAL1Q9BW62 490 aa17.83■□□□□ 0.44
LINC00339-209ENST00000635450 COL25A1Q9BXS0 654 aaPredicted RBP17.83■□□□□ 0.44
LINC00339-209ENST00000635450 FTOQ9C0B1 505 aaKnown RBP eCLIP17.83■□□□□ 0.44
LINC00339-209ENST00000635450 MLXIPQ9HAP2 919 aa17.83■□□□□ 0.44
LINC00339-209ENST00000635450 SPDYE3A6NKU9 549 aa17.82■□□□□ 0.44
LINC00339-209ENST00000635450 PRPF3O43395 683 aaKnown RBP17.82■□□□□ 0.44
LINC00339-209ENST00000635450 PPFIA4O75335 1185 aa17.82■□□□□ 0.44
LINC00339-209ENST00000635450 CA3P07451 260 aa17.82■□□□□ 0.44
LINC00339-209ENST00000635450 TGFB3P10600 412 aa17.82■□□□□ 0.44
LINC00339-209ENST00000635450 SCG2P13521 617 aa17.82■□□□□ 0.44
LINC00339-209ENST00000635450 SELPP16109 830 aa17.82■□□□□ 0.44
LINC00339-209ENST00000635450 STK3Q13188 491 aa17.82■□□□□ 0.44
LINC00339-209ENST00000635450 PFKFB3Q16875 520 aaPredicted RBP17.82■□□□□ 0.44
LINC00339-209ENST00000635450 ZNF618Q5T7W0 954 aa17.82■□□□□ 0.44
LINC00339-209ENST00000635450 PPP2R2DQ66LE6 453 aa17.82■□□□□ 0.44
LINC00339-209ENST00000635450 METTL7BQ6UX53 244 aa17.82■□□□□ 0.44
LINC00339-209ENST00000635450 TRIM22Q8IYM9 498 aa17.82■□□□□ 0.44
LINC00339-209ENST00000635450 CCDC12Q8WUD4 166 aaPredicted RBP17.82■□□□□ 0.44
LINC00339-209ENST00000635450 IL17RAQ96F46 866 aa17.82■□□□□ 0.44
LINC00339-209ENST00000635450 GPR20Q99678 358 aa17.82■□□□□ 0.44
LINC00339-209ENST00000635450 SLC26A6Q9BXS9 759 aa17.82■□□□□ 0.44
LINC00339-209ENST00000635450 RNF26Q9BY78 433 aaPredicted RBP17.82■□□□□ 0.44
LINC00339-209ENST00000635450 OSBPL7Q9BZF2 842 aa17.82■□□□□ 0.44
LINC00339-209ENST00000635450 GLT8D2Q9H1C3 349 aa17.82■□□□□ 0.44
LINC00339-209ENST00000635450 EHMT1Q9H9B1 1298 aa17.82■□□□□ 0.44
LINC00339-209ENST00000635450 NCOA5Q9HCD5 579 aaKnown RBP17.82■□□□□ 0.44
LINC00339-209ENST00000635450 BARHL2Q9NY43 387 aa17.82■□□□□ 0.44
LINC00339-209ENST00000635450 EPOPA6NHQ4 379 aa17.81■□□□□ 0.44
LINC00339-209ENST00000635450 STXBP3O00186 592 aa17.81■□□□□ 0.44
LINC00339-209ENST00000635450 FIBPO43427 364 aa17.81■□□□□ 0.44
LINC00339-209ENST00000635450 ATP9AO75110 1047 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms