RNA–Protein interactions for RNA: ENST00000632758.1

LIMS4-203, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 1,580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-203ENST00000632758 A0A1W2PQ64 194 aa16.66■□□□□ 0.26
LIMS4-203ENST00000632758 A0A1W2PQD8 194 aa16.66■□□□□ 0.26
LIMS4-203ENST00000632758 EML1O00423 815 aa16.66■□□□□ 0.26
LIMS4-203ENST00000632758 CHMP2AO43633 222 aa16.66■□□□□ 0.26
LIMS4-203ENST00000632758 GNRH1P01148 92 aa16.66■□□□□ 0.26
LIMS4-203ENST00000632758 ELNP15502 786 aa16.66■□□□□ 0.26
LIMS4-203ENST00000632758 CMA1P23946 247 aa16.66■□□□□ 0.26
LIMS4-203ENST00000632758 LONP1P36776 959 aaKnown RBP16.66■□□□□ 0.26
LIMS4-203ENST00000632758 ADCYAP1R1P41586 468 aa16.66■□□□□ 0.26
LIMS4-203ENST00000632758 TRIM32Q13049 653 aa16.66■□□□□ 0.26
LIMS4-203ENST00000632758 PDIA5Q14554 519 aa16.66■□□□□ 0.26
LIMS4-203ENST00000632758 TMEM266Q2M3C6 531 aa16.66■□□□□ 0.26
LIMS4-203ENST00000632758 COPS5Q92905 334 aa16.66■□□□□ 0.26
LIMS4-203ENST00000632758 TEKT3Q9BXF9 490 aa16.66■□□□□ 0.26
LIMS4-203ENST00000632758 UNC45AQ9H3U1 944 aa16.66■□□□□ 0.26
LIMS4-203ENST00000632758 LRWD1Q9UFC0 647 aa16.66■□□□□ 0.26
LIMS4-203ENST00000632758 ZHX1Q9UKY1 873 aaPredicted RBP16.66■□□□□ 0.26
LIMS4-203ENST00000632758 TRIM17Q9Y577 477 aa16.66■□□□□ 0.26
LIMS4-203ENST00000632758 PLXNA1Q9UIW2 1896 aa16.66■□□□□ 0.26
LIMS4-203ENST00000632758 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.65■□□□□ 0.26
LIMS4-203ENST00000632758 RBM47A0AV96 593 aaKnown RBP16.65■□□□□ 0.26
LIMS4-203ENST00000632758 DDX11L8A8MPP1 907 aa16.65■□□□□ 0.26
LIMS4-203ENST00000632758 FOXN1O15353 648 aa16.65■□□□□ 0.26
LIMS4-203ENST00000632758 ZNF865P0CJ78 1059 aaPredicted RBP16.65■□□□□ 0.26
LIMS4-203ENST00000632758 TXNP10599 105 aaKnown RBP16.65■□□□□ 0.26
LIMS4-203ENST00000632758 UBA1P22314 1058 aaKnown RBP16.65■□□□□ 0.26
LIMS4-203ENST00000632758 IRF5Q13568 498 aa16.65■□□□□ 0.26
LIMS4-203ENST00000632758 ARHGEF6Q15052 776 aa16.65■□□□□ 0.26
LIMS4-203ENST00000632758 RESP18Q5W5W9 173 aa16.65■□□□□ 0.26
LIMS4-203ENST00000632758 NCAPH2Q6IBW4 605 aa16.65■□□□□ 0.26
LIMS4-203ENST00000632758 B3GNT9Q6UX72 402 aa16.65■□□□□ 0.26
LIMS4-203ENST00000632758 CYFIP1Q7L576 1253 aa16.65■□□□□ 0.26
LIMS4-203ENST00000632758 FSIP1Q8NA03 581 aa16.65■□□□□ 0.26
LIMS4-203ENST00000632758 SYMPKQ92797 1274 aaKnown RBP16.65■□□□□ 0.26
LIMS4-203ENST00000632758 PANK2Q9BZ23 570 aa16.65■□□□□ 0.26
LIMS4-203ENST00000632758 TBC1D22BQ9NU19 505 aa16.65■□□□□ 0.26
LIMS4-203ENST00000632758 CCNE2O96020 404 aa16.64■□□□□ 0.25
LIMS4-203ENST00000632758 TGFB3P10600 412 aa16.64■□□□□ 0.25
LIMS4-203ENST00000632758 LIG1P18858 919 aa16.64■□□□□ 0.25
LIMS4-203ENST00000632758 PPP2R5CQ13362 524 aa16.64■□□□□ 0.25
LIMS4-203ENST00000632758 GJC2Q5T442 439 aaPredicted RBP16.64■□□□□ 0.25
LIMS4-203ENST00000632758 TRPV1Q8NER1 839 aa16.64■□□□□ 0.25
LIMS4-203ENST00000632758 RAET1EQ8TD07 263 aa16.64■□□□□ 0.25
LIMS4-203ENST00000632758 GPT2Q8TD30 523 aa16.64■□□□□ 0.25
LIMS4-203ENST00000632758 SCFD2Q8WU76 684 aa16.64■□□□□ 0.25
LIMS4-203ENST00000632758 SENP7Q9BQF6 1050 aa16.64■□□□□ 0.25
LIMS4-203ENST00000632758 SDF4Q9BRK5 362 aa16.64■□□□□ 0.25
LIMS4-203ENST00000632758 MMTAG2Q9BU76 263 aaKnown RBP16.64■□□□□ 0.25
LIMS4-203ENST00000632758 ADCY6O43306 1168 aa16.64■□□□□ 0.25
LIMS4-203ENST00000632758 ADCY3O60266 1144 aa16.64■□□□□ 0.25
LIMS4-203ENST00000632758 HSPA8P11142 646 aaKnown RBP16.64■□□□□ 0.25
LIMS4-203ENST00000632758 PFKFB1P16118 471 aa16.64■□□□□ 0.25
LIMS4-203ENST00000632758 NDUFA8P51970 172 aa16.64■□□□□ 0.25
LIMS4-203ENST00000632758 SP4Q02446 784 aa16.64■□□□□ 0.25
LIMS4-203ENST00000632758 TTLL4Q14679 1199 aa16.64■□□□□ 0.25
LIMS4-203ENST00000632758 CCDC144BQ3MJ40 725 aa16.64■□□□□ 0.25
LIMS4-203ENST00000632758 MFSD14CQ5VZR4 134 aa16.64■□□□□ 0.25
LIMS4-203ENST00000632758 KCNV1Q6PIU1 500 aa16.64■□□□□ 0.25
LIMS4-203ENST00000632758 MRPS27Q92552 414 aaKnown RBP16.64■□□□□ 0.25
LIMS4-203ENST00000632758 LRRC37A2A6NM11 1700 aa16.63■□□□□ 0.25
LIMS4-203ENST00000632758 NFASCO94856 1347 aa16.63■□□□□ 0.25
LIMS4-203ENST00000632758 MCM3APO60318 1980 aa16.63■□□□□ 0.25
LIMS4-203ENST00000632758 A0A087X0B3 334 aa16.63■□□□□ 0.25
LIMS4-203ENST00000632758 GGPS1O95749 300 aa16.63■□□□□ 0.25
LIMS4-203ENST00000632758 HSPA1AP0DMV8 641 aaKnown RBP16.63■□□□□ 0.25
LIMS4-203ENST00000632758 HSPA1BP0DMV9 641 aaKnown RBP16.63■□□□□ 0.25
LIMS4-203ENST00000632758 SMPD1P17405 629 aa16.63■□□□□ 0.25
LIMS4-203ENST00000632758 NEDD9Q14511 834 aa16.63■□□□□ 0.25
LIMS4-203ENST00000632758 CABP7Q86V35 215 aa16.63■□□□□ 0.25
LIMS4-203ENST00000632758 AK8Q96MA6 479 aa16.63■□□□□ 0.25
LIMS4-203ENST00000632758 RAB34Q9BZG1 259 aa16.63■□□□□ 0.25
LIMS4-203ENST00000632758 SLC9A2Q9UBY0 812 aa16.63■□□□□ 0.25
LIMS4-203ENST00000632758 HPSEQ9Y251 543 aa16.63■□□□□ 0.25
LIMS4-203ENST00000632758 PTCH2Q9Y6C5 1203 aa16.63■□□□□ 0.25
LIMS4-203ENST00000632758 FAM237AA0A1B0GTK4 181 aa16.62■□□□□ 0.25
LIMS4-203ENST00000632758 FARP2O94887 1054 aaPredicted RBP16.62■□□□□ 0.25
LIMS4-203ENST00000632758 UBA7P41226 1012 aa16.62■□□□□ 0.25
LIMS4-203ENST00000632758 CACNB2Q08289 660 aaPredicted RBP16.62■□□□□ 0.25
LIMS4-203ENST00000632758 KARSQ15046 597 aaKnown RBP16.62■□□□□ 0.25
LIMS4-203ENST00000632758 ZRSR1Q15695 479 aaKnown RBP16.62■□□□□ 0.25
LIMS4-203ENST00000632758 ECM1Q16610 540 aa16.62■□□□□ 0.25
LIMS4-203ENST00000632758 CELF3Q5SZQ8 465 aaKnown RBP16.62■□□□□ 0.25
LIMS4-203ENST00000632758 IQSEC1Q6DN90 963 aa16.62■□□□□ 0.25
LIMS4-203ENST00000632758 TRMT44Q8IYL2 757 aaKnown RBP16.62■□□□□ 0.25
LIMS4-203ENST00000632758 PLIN2Q99541 437 aa16.62■□□□□ 0.25
LIMS4-203ENST00000632758 MLXIPQ9HAP2 919 aa16.62■□□□□ 0.25
LIMS4-203ENST00000632758 JPH1Q9HDC5 661 aaPredicted RBP16.62■□□□□ 0.25
LIMS4-203ENST00000632758 FAM13BQ9NYF5 915 aa16.62■□□□□ 0.25
LIMS4-203ENST00000632758 RGL1Q9NZL6 768 aa16.62■□□□□ 0.25
LIMS4-203ENST00000632758 POTEFA5A3E0 1075 aa16.61■□□□□ 0.25
LIMS4-203ENST00000632758 MED24O75448 989 aa16.61■□□□□ 0.25
LIMS4-203ENST00000632758 NR1I2O75469 434 aa16.61■□□□□ 0.25
LIMS4-203ENST00000632758 LBX1P52954 281 aa16.61■□□□□ 0.25
LIMS4-203ENST00000632758 PRMT2P55345 433 aa16.61■□□□□ 0.25
LIMS4-203ENST00000632758 TNFAIP2Q03169 654 aa16.61■□□□□ 0.25
LIMS4-203ENST00000632758 SNW1Q13573 536 aaKnown RBP16.61■□□□□ 0.25
LIMS4-203ENST00000632758 MIER3Q7Z3K6 550 aa16.61■□□□□ 0.25
LIMS4-203ENST00000632758 DHX37Q8IY37 1157 aaKnown RBP16.61■□□□□ 0.25
LIMS4-203ENST00000632758 PDILTQ8N807 584 aa16.61■□□□□ 0.25
LIMS4-203ENST00000632758 ENGASEQ8NFI3 743 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms