RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 CLDND1Q9NY35 253 aa23.43■■□□□ 1.34
TARDBP-228ENST00000629725 MAP3K20Q9NYL2 800 aaKnown RBP23.43■■□□□ 1.34
TARDBP-228ENST00000629725 TRIM6-TRIM34B2RNG4 842 aa23.42■■□□□ 1.34
TARDBP-228ENST00000629725 TREHO43280 583 aa23.42■■□□□ 1.34
TARDBP-228ENST00000629725 UBA1P22314 1058 aaKnown RBP23.42■■□□□ 1.34
TARDBP-228ENST00000629725 GHRHRQ02643 423 aa23.42■■□□□ 1.34
TARDBP-228ENST00000629725 PGM5Q15124 567 aa23.42■■□□□ 1.34
TARDBP-228ENST00000629725 VSIG10LQ86VR7 867 aa23.42■■□□□ 1.34
TARDBP-228ENST00000629725 ADHFE1Q8IWW8 467 aa23.42■■□□□ 1.34
TARDBP-228ENST00000629725 ENAHQ8N8S7 591 aaPredicted RBP23.42■■□□□ 1.34
TARDBP-228ENST00000629725 FBXL18Q96ME1 805 aa23.42■■□□□ 1.34
TARDBP-228ENST00000629725 MYO7AQ13402 2215 aa23.42■■□□□ 1.34
TARDBP-228ENST00000629725 USP34Q70CQ2 3546 aa23.42■■□□□ 1.34
TARDBP-228ENST00000629725 ATG2AQ2TAZ0 1938 aa23.41■■□□□ 1.34
TARDBP-228ENST00000629725 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.41■■□□□ 1.34
TARDBP-228ENST00000629725 C19orf67A6NJJ6 358 aa23.41■■□□□ 1.34
TARDBP-228ENST00000629725 CAND2O75155 1236 aa23.41■■□□□ 1.34
TARDBP-228ENST00000629725 CTSHP09668 335 aa23.41■■□□□ 1.34
TARDBP-228ENST00000629725 SMIM10L2AP0DMW4 78 aa23.41■■□□□ 1.34
TARDBP-228ENST00000629725 SMIM10L2BP0DMW5 78 aa23.41■■□□□ 1.34
TARDBP-228ENST00000629725 HOXC8P31273 242 aa23.41■■□□□ 1.34
TARDBP-228ENST00000629725 RILPL2Q969X0 211 aa23.41■■□□□ 1.34
TARDBP-228ENST00000629725 IFIH1Q9BYX4 1025 aaKnown RBP23.41■■□□□ 1.34
TARDBP-228ENST00000629725 RNPEPQ9H4A4 650 aa23.41■■□□□ 1.34
TARDBP-228ENST00000629725 B4E1Z4 1266 aa23.4■■□□□ 1.34
TARDBP-228ENST00000629725 NCK2O43639 380 aa23.4■■□□□ 1.34
TARDBP-228ENST00000629725 APBB2Q92870 758 aa23.4■■□□□ 1.34
TARDBP-228ENST00000629725 OSBPL7Q9BZF2 842 aa23.4■■□□□ 1.34
TARDBP-228ENST00000629725 UPF3BQ9BZI7 483 aaKnown RBP23.4■■□□□ 1.34
TARDBP-228ENST00000629725 LGALS2P05162 132 aa23.39■■□□□ 1.33
TARDBP-228ENST00000629725 HOXA13P31271 388 aaPredicted RBP23.39■■□□□ 1.33
TARDBP-228ENST00000629725 STAG2Q8N3U4 1231 aa23.39■■□□□ 1.33
TARDBP-228ENST00000629725 SAMD3Q8N6K7 520 aa23.39■■□□□ 1.33
TARDBP-228ENST00000629725 IL31RAQ8NI17 732 aa23.39■■□□□ 1.33
TARDBP-228ENST00000629725 ZSWIM5Q9P217 1185 aa23.39■■□□□ 1.33
TARDBP-228ENST00000629725 PCDHA1Q9Y5I3 950 aa23.39■■□□□ 1.33
TARDBP-228ENST00000629725 ZNF318Q5VUA4 2279 aa23.38■■□□□ 1.33
TARDBP-228ENST00000629725 GNAT1P11488 350 aa23.38■■□□□ 1.33
TARDBP-228ENST00000629725 CCND2P30279 289 aa23.38■■□□□ 1.33
TARDBP-228ENST00000629725 LTBRP36941 435 aa23.38■■□□□ 1.33
TARDBP-228ENST00000629725 RPAINQ86UA6 219 aa23.38■■□□□ 1.33
TARDBP-228ENST00000629725 FIBCD1Q8N539 461 aa23.38■■□□□ 1.33
TARDBP-228ENST00000629725 GPKOWQ92917 476 aaPredicted RBP eCLIP23.38■■□□□ 1.33
TARDBP-228ENST00000629725 IL17RAQ96F46 866 aa23.38■■□□□ 1.33
TARDBP-228ENST00000629725 ZFP91Q96JP5 570 aaPredicted RBP23.38■■□□□ 1.33
TARDBP-228ENST00000629725 USP26Q9BXU7 913 aa23.38■■□□□ 1.33
TARDBP-228ENST00000629725 NOP56O00567 594 aaKnown RBP23.37■■□□□ 1.33
TARDBP-228ENST00000629725 ZBTB5O15062 677 aa23.37■■□□□ 1.33
TARDBP-228ENST00000629725 PPP1R11O60927 126 aaPredicted RBP23.37■■□□□ 1.33
TARDBP-228ENST00000629725 SDSP20132 328 aa23.37■■□□□ 1.33
TARDBP-228ENST00000629725 CTNNB1P35222 781 aa23.37■■□□□ 1.33
TARDBP-228ENST00000629725 IRS1P35568 1242 aa23.37■■□□□ 1.33
TARDBP-228ENST00000629725 HFE2Q6ZVN8 426 aa23.37■■□□□ 1.33
TARDBP-228ENST00000629725 KAT6AQ92794 2004 aa23.37■■□□□ 1.33
TARDBP-228ENST00000629725 DOCK5Q9H7D0 1870 aa23.36■■□□□ 1.33
TARDBP-228ENST00000629725 KLRF2D3W0D1 207 aa23.36■■□□□ 1.33
TARDBP-228ENST00000629725 C5orf67F2Z3F1 127 aa23.36■■□□□ 1.33
TARDBP-228ENST00000629725 RB1P06400 928 aa23.36■■□□□ 1.33
TARDBP-228ENST00000629725 SMAD2Q15796 467 aaKnown RBP23.36■■□□□ 1.33
TARDBP-228ENST00000629725 CTC1Q2NKJ3 1217 aa23.36■■□□□ 1.33
TARDBP-228ENST00000629725 MTMR8Q96EF0 704 aa23.36■■□□□ 1.33
TARDBP-228ENST00000629725 MFSD14AQ96MC6 490 aa23.36■■□□□ 1.33
TARDBP-228ENST00000629725 POP1Q99575 1024 aaKnown RBP23.36■■□□□ 1.33
TARDBP-228ENST00000629725 UBAC1Q9BSL1 405 aa23.36■■□□□ 1.33
TARDBP-228ENST00000629725 BCAS3Q9H6U6 928 aa23.36■■□□□ 1.33
TARDBP-228ENST00000629725 SETD4Q9NVD3 440 aa23.36■■□□□ 1.33
TARDBP-228ENST00000629725 CLUL1Q15846 466 aa23.35■■□□□ 1.33
TARDBP-228ENST00000629725 IFIT1BQ5T764 474 aaKnown RBP23.35■■□□□ 1.33
TARDBP-228ENST00000629725 C11orf84Q9BUA3 381 aaPredicted RBP23.35■■□□□ 1.33
TARDBP-228ENST00000629725 LMAN2LQ9H0V9 348 aa23.35■■□□□ 1.33
TARDBP-228ENST00000629725 RWDD3Q9Y3V2 267 aa23.35■■□□□ 1.33
TARDBP-228ENST00000629725 GCOM1H8Y6P7 765 aaPredicted RBP23.34■■□□□ 1.33
TARDBP-228ENST00000629725 POLR2MP0CAP2 368 aa23.34■■□□□ 1.33
TARDBP-228ENST00000629725 BMPR1AP36894 532 aa23.34■■□□□ 1.33
TARDBP-228ENST00000629725 DLX2Q07687 328 aaPredicted RBP23.34■■□□□ 1.33
TARDBP-228ENST00000629725 IMMTQ16891 758 aaKnown RBP23.34■■□□□ 1.33
TARDBP-228ENST00000629725 GNPTABQ3T906 1256 aa23.34■■□□□ 1.33
TARDBP-228ENST00000629725 FCHSD1Q86WN1 690 aa23.34■■□□□ 1.33
TARDBP-228ENST00000629725 KRT23Q9C075 422 aa23.34■■□□□ 1.33
TARDBP-228ENST00000629725 MAD2L2Q9UI95 211 aa23.34■■□□□ 1.33
TARDBP-228ENST00000629725 GRM6O15303 877 aa23.33■■□□□ 1.33
TARDBP-228ENST00000629725 MBTPS2O43462 519 aa23.33■■□□□ 1.33
TARDBP-228ENST00000629725 HYAL1Q12794 435 aa23.33■■□□□ 1.33
TARDBP-228ENST00000629725 TRAF1Q13077 416 aa23.33■■□□□ 1.33
TARDBP-228ENST00000629725 NEDD9Q14511 834 aa23.33■■□□□ 1.33
TARDBP-228ENST00000629725 FAM26DQ5JW98 314 aa23.33■■□□□ 1.33
TARDBP-228ENST00000629725 CWC27Q6UX04 472 aaKnown RBP23.33■■□□□ 1.33
TARDBP-228ENST00000629725 METTL7BQ6UX53 244 aa23.33■■□□□ 1.33
TARDBP-228ENST00000629725 CYFIP1Q7L576 1253 aa23.33■■□□□ 1.33
TARDBP-228ENST00000629725 HOMER1Q86YM7 354 aa23.33■■□□□ 1.33
TARDBP-228ENST00000629725 MUTYHQ9UIF7 546 aa23.33■■□□□ 1.33
TARDBP-228ENST00000629725 ZNF215Q9UL58 517 aaPredicted RBP23.33■■□□□ 1.33
TARDBP-228ENST00000629725 LINC00271P0C7V0 271 aa23.32■■□□□ 1.32
TARDBP-228ENST00000629725 ARHGAP4P98171 946 aa23.32■■□□□ 1.32
TARDBP-228ENST00000629725 HERC4Q5GLZ8 1057 aaPredicted RBP23.32■■□□□ 1.32
TARDBP-228ENST00000629725 GPR20Q99678 358 aa23.32■■□□□ 1.32
TARDBP-228ENST00000629725 CNNM2Q9H8M5 875 aa23.32■■□□□ 1.32
TARDBP-228ENST00000629725 BAZ2BQ9UIF8 2168 aaKnown RBP23.32■■□□□ 1.32
TARDBP-228ENST00000629725 ADGRA3Q8IWK6 1321 aa23.32■■□□□ 1.32
TARDBP-228ENST00000629725 STAM2O75886 525 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms