RNA–Protein interactions for RNA: ENST00000629378.2

SPTAN1-219, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-219ENST00000629378 IGFBP4P22692 258 aa10.41□□□□□ -0.74
SPTAN1-219ENST00000629378 MRPS9P82933 396 aaKnown RBP10.41□□□□□ -0.74
SPTAN1-219ENST00000629378 ST3GAL1Q11201 340 aa10.41□□□□□ -0.74
SPTAN1-219ENST00000629378 LAMC2Q13753 1193 aa10.41□□□□□ -0.74
SPTAN1-219ENST00000629378 MFSD10Q14728 455 aa10.41□□□□□ -0.74
SPTAN1-219ENST00000629378 RAB30Q15771 203 aa10.41□□□□□ -0.74
SPTAN1-219ENST00000629378 KIAA0753Q2KHM9 967 aa10.41□□□□□ -0.74
SPTAN1-219ENST00000629378 CELF3Q5SZQ8 465 aaKnown RBP10.41□□□□□ -0.74
SPTAN1-219ENST00000629378 ZNF654Q8IZM8 581 aa10.41□□□□□ -0.74
SPTAN1-219ENST00000629378 SRBD1Q8N5C6 995 aaKnown RBP10.41□□□□□ -0.74
SPTAN1-219ENST00000629378 MTIF3Q9H2K0 278 aaKnown RBP10.41□□□□□ -0.74
SPTAN1-219ENST00000629378 SLC28A3Q9HAS3 691 aa10.41□□□□□ -0.74
SPTAN1-219ENST00000629378 NAP1L2Q9ULW6 460 aaPredicted RBP10.41□□□□□ -0.74
SPTAN1-219ENST00000629378 VCANP13611 3396 aa10.4□□□□□ -0.74
SPTAN1-219ENST00000629378 HAS3O00219 553 aa10.4□□□□□ -0.74
SPTAN1-219ENST00000629378 PITPNM1O00562 1244 aa10.4□□□□□ -0.74
SPTAN1-219ENST00000629378 SH2B2O14492 632 aaPredicted RBP10.4□□□□□ -0.74
SPTAN1-219ENST00000629378 PFKFB2O60825 505 aa10.4□□□□□ -0.74
SPTAN1-219ENST00000629378 PDIA3P30101 505 aaKnown RBP10.4□□□□□ -0.74
SPTAN1-219ENST00000629378 CCND2P30279 289 aa10.4□□□□□ -0.74
SPTAN1-219ENST00000629378 BFSP2Q13515 415 aa10.4□□□□□ -0.74
SPTAN1-219ENST00000629378 SART3Q15020 963 aaKnown RBP10.4□□□□□ -0.74
SPTAN1-219ENST00000629378 USP17L6PQ6QN14 398 aa10.4□□□□□ -0.74
SPTAN1-219ENST00000629378 SPRED2Q7Z698 418 aa10.4□□□□□ -0.74
SPTAN1-219ENST00000629378 SESTD1Q86VW0 696 aa10.4□□□□□ -0.74
SPTAN1-219ENST00000629378 CCDC82Q8N4S0 544 aa10.4□□□□□ -0.74
SPTAN1-219ENST00000629378 C7orf31Q8N865 590 aa10.4□□□□□ -0.74
SPTAN1-219ENST00000629378 PPTC7Q8NI37 304 aa10.4□□□□□ -0.74
SPTAN1-219ENST00000629378 GTF3C6Q969F1 213 aa10.4□□□□□ -0.74
SPTAN1-219ENST00000629378 EMID1Q96A84 441 aaPredicted RBP10.4□□□□□ -0.74
SPTAN1-219ENST00000629378 ZNF274Q96GC6 653 aaPredicted RBP10.4□□□□□ -0.74
SPTAN1-219ENST00000629378 TMEM87BQ96K49 555 aa10.4□□□□□ -0.74
SPTAN1-219ENST00000629378 SPATA33Q96N06 139 aa10.4□□□□□ -0.74
SPTAN1-219ENST00000629378 GAS2L1Q99501 681 aaPredicted RBP10.4□□□□□ -0.74
SPTAN1-219ENST00000629378 MAP3K20Q9NYL2 800 aaKnown RBP10.4□□□□□ -0.74
SPTAN1-219ENST00000629378 GTF2IRD1Q9UHL9 959 aa10.4□□□□□ -0.74
SPTAN1-219ENST00000629378 PCDHA11Q9Y5I1 949 aa10.4□□□□□ -0.74
SPTAN1-219ENST00000629378 KLF18A0A0U1RQI7 1052 aa10.39□□□□□ -0.75
SPTAN1-219ENST00000629378 EPOPA6NHQ4 379 aa10.39□□□□□ -0.75
SPTAN1-219ENST00000629378 NBNO60934 754 aa10.39□□□□□ -0.75
SPTAN1-219ENST00000629378 CA3P07451 260 aa10.39□□□□□ -0.75
SPTAN1-219ENST00000629378 PFKMP08237 780 aa10.39□□□□□ -0.75
SPTAN1-219ENST00000629378 CKBP12277 381 aa10.39□□□□□ -0.75
SPTAN1-219ENST00000629378 ACTN1P12814 892 aa10.39□□□□□ -0.75
SPTAN1-219ENST00000629378 UBA1P22314 1058 aaKnown RBP10.39□□□□□ -0.75
SPTAN1-219ENST00000629378 GJB2P29033 226 aa10.39□□□□□ -0.75
SPTAN1-219ENST00000629378 RFC2P35250 354 aa10.39□□□□□ -0.75
SPTAN1-219ENST00000629378 EVCP57679 992 aa10.39□□□□□ -0.75
SPTAN1-219ENST00000629378 CCT2P78371 535 aaKnown RBP10.39□□□□□ -0.75
SPTAN1-219ENST00000629378 SCRN1Q12765 414 aa10.39□□□□□ -0.75
SPTAN1-219ENST00000629378 SEMA3FQ13275 785 aa10.39□□□□□ -0.75
SPTAN1-219ENST00000629378 PKP1Q13835 747 aa10.39□□□□□ -0.75
SPTAN1-219ENST00000629378 NBR1Q14596 966 aa10.39□□□□□ -0.75
SPTAN1-219ENST00000629378 NFKBIBQ15653 356 aa10.39□□□□□ -0.75
SPTAN1-219ENST00000629378 TRIM71Q2Q1W2 868 aaKnown RBP10.39□□□□□ -0.75
SPTAN1-219ENST00000629378 PPP2R2DQ66LE6 453 aa10.39□□□□□ -0.75
SPTAN1-219ENST00000629378 NFXL1Q6ZNB6 911 aa10.39□□□□□ -0.75
SPTAN1-219ENST00000629378 SAMD3Q8N6K7 520 aa10.39□□□□□ -0.75
SPTAN1-219ENST00000629378 TNPO1Q92973 898 aaKnown RBP10.39□□□□□ -0.75
SPTAN1-219ENST00000629378 C16orf70Q9BSU1 422 aa10.39□□□□□ -0.75
SPTAN1-219ENST00000629378 MLXIPQ9HAP2 919 aa10.39□□□□□ -0.75
SPTAN1-219ENST00000629378 BRPF3Q9ULD4 1205 aa10.39□□□□□ -0.75
SPTAN1-219ENST00000629378 CCDC69A6NI79 296 aa10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 SPATA31C2B4DYI2 1134 aa10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 MEIS2O14770 477 aa10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 DTNBO60941 627 aa10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 PPFIA4O75335 1185 aa10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 F2P00734 622 aa10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 HOXD8P13378 290 aaPredicted RBP10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 SELPP16109 830 aa10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 DEFB103AP81534 67 aa10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 MBTPS1Q14703 1052 aa10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 ZNF618Q5T7W0 954 aa10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 KRT40Q6A162 431 aa10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 KCNV1Q6PIU1 500 aa10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 TRAF7Q6Q0C0 670 aa10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 LRRC8DQ7L1W4 858 aa10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 CYFIP1Q7L576 1253 aa10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 HERC6Q8IVU3 1022 aa10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 MICALL1Q8N3F8 863 aa10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 CTCFLQ8NI51 663 aaPredicted RBP10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 AFAP1L1Q8TED9 768 aa10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 RRP36Q96EU6 259 aaKnown RBP10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 MTA3Q9BTC8 594 aa10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 SPZ1Q9BXG8 430 aa10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 OSBPL7Q9BZF2 842 aa10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 ZDHHC9Q9Y397 364 aa10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 SPTBN5Q9NRC6 3674 aaKnown RBP10.38□□□□□ -0.75
SPTAN1-219ENST00000629378 LCHNA4D1U4 455 aa10.37□□□□□ -0.75
SPTAN1-219ENST00000629378 GOLGA8BA8MQT2 603 aa10.37□□□□□ -0.75
SPTAN1-219ENST00000629378 DDAH1O94760 285 aa10.37□□□□□ -0.75
SPTAN1-219ENST00000629378 TGFB3P10600 412 aa10.37□□□□□ -0.75
SPTAN1-219ENST00000629378 LIFRP42702 1097 aa10.37□□□□□ -0.75
SPTAN1-219ENST00000629378 WDR5P61964 334 aaKnown RBP10.37□□□□□ -0.75
SPTAN1-219ENST00000629378 SP4Q02446 784 aa10.37□□□□□ -0.75
SPTAN1-219ENST00000629378 TAP1Q03518 808 aa10.37□□□□□ -0.75
SPTAN1-219ENST00000629378 TRAF1Q13077 416 aa10.37□□□□□ -0.75
SPTAN1-219ENST00000629378 PTK7Q13308 1070 aa10.37□□□□□ -0.75
SPTAN1-219ENST00000629378 UBE2SQ16763 222 aa10.37□□□□□ -0.75
SPTAN1-219ENST00000629378 UTP14CQ5TAP6 766 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms