RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 SLKQ9H2G2 1235 aaPredicted RBP12.72□□□□□ -0.37
DDX41-219ENST00000629036 GJB4Q9NTQ9 266 aa12.72□□□□□ -0.37
DDX41-219ENST00000629036 POLR3EQ9NVU0 708 aa12.72□□□□□ -0.37
DDX41-219ENST00000629036 RTEL1Q9NZ71 1219 aa12.72□□□□□ -0.37
DDX41-219ENST00000629036 SPDYE3A6NKU9 549 aa12.71□□□□□ -0.37
DDX41-219ENST00000629036 PQBP1O60828 265 aaKnown RBP12.71□□□□□ -0.37
DDX41-219ENST00000629036 FOSP01100 380 aaPredicted RBP12.71□□□□□ -0.37
DDX41-219ENST00000629036 CYP3A4P08684 503 aa12.71□□□□□ -0.37
DDX41-219ENST00000629036 ARHGAP4P98171 946 aa12.71□□□□□ -0.37
DDX41-219ENST00000629036 SSRP1Q08945 709 aaKnown RBP12.71□□□□□ -0.37
DDX41-219ENST00000629036 ITGA7Q13683 1181 aa12.71□□□□□ -0.37
DDX41-219ENST00000629036 JAKMIP3Q5VZ66 844 aa12.71□□□□□ -0.37
DDX41-219ENST00000629036 KCNV1Q6PIU1 500 aa12.71□□□□□ -0.37
DDX41-219ENST00000629036 REXO1Q8N1G1 1221 aaKnown RBP12.71□□□□□ -0.37
DDX41-219ENST00000629036 PPP1R13LQ8WUF5 828 aa12.71□□□□□ -0.37
DDX41-219ENST00000629036 SYMPKQ92797 1274 aaKnown RBP12.71□□□□□ -0.37
DDX41-219ENST00000629036 LENG9Q96B70 501 aa12.71□□□□□ -0.37
DDX41-219ENST00000629036 VWCEQ96DN2 955 aa12.71□□□□□ -0.37
DDX41-219ENST00000629036 LBHD1Q9BQE6 289 aaPredicted RBP12.71□□□□□ -0.37
DDX41-219ENST00000629036 SENP7Q9BQF6 1050 aa12.71□□□□□ -0.37
DDX41-219ENST00000629036 MTG1Q9BT17 334 aaPredicted RBP12.71□□□□□ -0.37
DDX41-219ENST00000629036 GLT8D2Q9H1C3 349 aa12.71□□□□□ -0.37
DDX41-219ENST00000629036 JADE2Q9NQC1 790 aa12.71□□□□□ -0.37
DDX41-219ENST00000629036 ARID2Q68CP9 1835 aa12.7□□□□□ -0.38
DDX41-219ENST00000629036 FAM86B1E9PN63 330 aa12.7□□□□□ -0.38
DDX41-219ENST00000629036 MEIS1O00470 390 aa12.7□□□□□ -0.38
DDX41-219ENST00000629036 SORBS3O60504 671 aa12.7□□□□□ -0.38
DDX41-219ENST00000629036 B4GALT4O60513 344 aa12.7□□□□□ -0.38
DDX41-219ENST00000629036 JAK2O60674 1132 aa12.7□□□□□ -0.38
DDX41-219ENST00000629036 MYL3P08590 195 aa12.7□□□□□ -0.38
DDX41-219ENST00000629036 CLTBP09497 229 aa12.7□□□□□ -0.38
DDX41-219ENST00000629036 FAM86B2P0C5J1 330 aa12.7□□□□□ -0.38
DDX41-219ENST00000629036 ZNF286BP0CG31 522 aa12.7□□□□□ -0.38
DDX41-219ENST00000629036 HOXC8P31273 242 aa12.7□□□□□ -0.38
DDX41-219ENST00000629036 ITGB3BPQ13352 177 aaPredicted RBP12.7□□□□□ -0.38
DDX41-219ENST00000629036 LAMC2Q13753 1193 aa12.7□□□□□ -0.38
DDX41-219ENST00000629036 HIC1Q14526 733 aa12.7□□□□□ -0.38
DDX41-219ENST00000629036 GNPTABQ3T906 1256 aa12.7□□□□□ -0.38
DDX41-219ENST00000629036 METTL7BQ6UX53 244 aa12.7□□□□□ -0.38
DDX41-219ENST00000629036 SESTD1Q86VW0 696 aa12.7□□□□□ -0.38
DDX41-219ENST00000629036 FAM177A1Q8N128 213 aaPredicted RBP12.7□□□□□ -0.38
DDX41-219ENST00000629036 CCDC148Q8NFR7 591 aa12.7□□□□□ -0.38
DDX41-219ENST00000629036 GPR20Q99678 358 aa12.7□□□□□ -0.38
DDX41-219ENST00000629036 MXRA8Q9BRK3 442 aa12.7□□□□□ -0.38
DDX41-219ENST00000629036 C16orf70Q9BSU1 422 aa12.7□□□□□ -0.38
DDX41-219ENST00000629036 PHF20Q9BVI0 1012 aa12.7□□□□□ -0.38
DDX41-219ENST00000629036 BACH2Q9BYV9 841 aa12.7□□□□□ -0.38
DDX41-219ENST00000629036 EVPLQ92817 2033 aa12.7□□□□□ -0.38
DDX41-219ENST00000629036 UMODL1Q5DID0 1318 aa12.69□□□□□ -0.38
DDX41-219ENST00000629036 CPLX1O14810 134 aa12.69□□□□□ -0.38
DDX41-219ENST00000629036 ZEB2O60315 1214 aa12.69□□□□□ -0.38
DDX41-219ENST00000629036 KPNA6O60684 536 aa12.69□□□□□ -0.38
DDX41-219ENST00000629036 ARP10275 920 aa12.69□□□□□ -0.38
DDX41-219ENST00000629036 CIITAP33076 1130 aa12.69□□□□□ -0.38
DDX41-219ENST00000629036 NBPF20Q3BBV1 942 aa12.69□□□□□ -0.38
DDX41-219ENST00000629036 CEP55Q53EZ4 464 aa12.69□□□□□ -0.38
DDX41-219ENST00000629036 CYFIP1Q7L576 1253 aa12.69□□□□□ -0.38
DDX41-219ENST00000629036 NIPA1Q7RTP0 329 aa12.69□□□□□ -0.38
DDX41-219ENST00000629036 DHX37Q8IY37 1157 aaKnown RBP12.69□□□□□ -0.38
DDX41-219ENST00000629036 TRIM22Q8IYM9 498 aa12.69□□□□□ -0.38
DDX41-219ENST00000629036 CCDC12Q8WUD4 166 aaPredicted RBP12.69□□□□□ -0.38
DDX41-219ENST00000629036 TNFRSF25Q93038 417 aa12.69□□□□□ -0.38
DDX41-219ENST00000629036 TRPV6Q9H1D0 765 aa12.69□□□□□ -0.38
DDX41-219ENST00000629036 SEMA6BQ9H3T3 888 aa12.69□□□□□ -0.38
DDX41-219ENST00000629036 C6orf50Q9HD87 102 aa12.69□□□□□ -0.38
DDX41-219ENST00000629036 KCNH7Q9NS40 1196 aa12.69□□□□□ -0.38
DDX41-219ENST00000629036 PCDHA4Q9UN74 947 aa12.69□□□□□ -0.38
DDX41-219ENST00000629036 LIMCH1Q9UPQ0 1083 aa12.69□□□□□ -0.38
DDX41-219ENST00000629036 MICAL3Q7RTP6 2002 aa12.69□□□□□ -0.38
DDX41-219ENST00000629036 MROH7Q68CQ1 1323 aa12.68□□□□□ -0.38
DDX41-219ENST00000629036 TMEM265A0A087WTH1 108 aa12.68□□□□□ -0.38
DDX41-219ENST00000629036 TNFRSF10AO00220 468 aa12.68□□□□□ -0.38
DDX41-219ENST00000629036 DHX15O43143 795 aaKnown RBP12.68□□□□□ -0.38
DDX41-219ENST00000629036 LGALS2P05162 132 aa12.68□□□□□ -0.38
DDX41-219ENST00000629036 FOSL2P15408 326 aa12.68□□□□□ -0.38
DDX41-219ENST00000629036 GNA11P29992 359 aa12.68□□□□□ -0.38
DDX41-219ENST00000629036 EPHB4P54760 987 aa12.68□□□□□ -0.38
DDX41-219ENST00000629036 AKAP17AQ02040 695 aaKnown RBP12.68□□□□□ -0.38
DDX41-219ENST00000629036 MTMR1Q13613 665 aa12.68□□□□□ -0.38
DDX41-219ENST00000629036 DGKDQ16760 1214 aa12.68□□□□□ -0.38
DDX41-219ENST00000629036 NFRKBQ6P4R8 1299 aa12.68□□□□□ -0.38
DDX41-219ENST00000629036 SPATA33Q96N06 139 aa12.68□□□□□ -0.38
DDX41-219ENST00000629036 MBOAT7Q96N66 472 aa12.68□□□□□ -0.38
DDX41-219ENST00000629036 WNT8AQ9H1J5 351 aa12.68□□□□□ -0.38
DDX41-219ENST00000629036 AGO4Q9HCK5 861 aaKnown RBP12.68□□□□□ -0.38
DDX41-219ENST00000629036 TRMT13Q9NUP7 481 aaKnown RBP12.68□□□□□ -0.38
DDX41-219ENST00000629036 ORC3Q9UBD5 711 aaPredicted RBP12.68□□□□□ -0.38
DDX41-219ENST00000629036 KCNJ14Q9UNX9 436 aa12.68□□□□□ -0.38
DDX41-219ENST00000629036 MYO9BQ13459 2157 aa12.68□□□□□ -0.38
DDX41-219ENST00000629036 NFASCO94856 1347 aa12.67□□□□□ -0.38
DDX41-219ENST00000629036 GSTTP1A0A1W2PQM5 241 aa12.67□□□□□ -0.38
DDX41-219ENST00000629036 RBAK-RBAKDNI3L0D1 243 aa12.67□□□□□ -0.38
DDX41-219ENST00000629036 PPFIA4O75335 1185 aa12.67□□□□□ -0.38
DDX41-219ENST00000629036 CDKL5O76039 1030 aa12.67□□□□□ -0.38
DDX41-219ENST00000629036 NEDD9Q14511 834 aa12.67□□□□□ -0.38
DDX41-219ENST00000629036 RABEP1Q15276 862 aa12.67□□□□□ -0.38
DDX41-219ENST00000629036 EARS2Q5JPH6 523 aaKnown RBP12.67□□□□□ -0.38
DDX41-219ENST00000629036 GDF6Q6KF10 455 aaPredicted RBP12.67□□□□□ -0.38
DDX41-219ENST00000629036 CPLX2Q6PUV4 134 aaKnown RBP12.67□□□□□ -0.38
DDX41-219ENST00000629036 NLRX1Q86UT6 975 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms