RNA–Protein interactions for RNA: ENST00000628579.1

TMCO1-209, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5 BASIC

Gene TMCO1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-209ENST00000628579 RUFY3Q7L099 469 aa12.03□□□□□ -0.48
TMCO1-209ENST00000628579 NLRX1Q86UT6 975 aa12.03□□□□□ -0.48
TMCO1-209ENST00000628579 WNT8BQ93098 351 aa12.03□□□□□ -0.48
TMCO1-209ENST00000628579 PHKBQ93100 1093 aa12.03□□□□□ -0.48
TMCO1-209ENST00000628579 GPR20Q99678 358 aa12.03□□□□□ -0.48
TMCO1-209ENST00000628579 UPF3BQ9BZI7 483 aaKnown RBP12.03□□□□□ -0.48
TMCO1-209ENST00000628579 SEMA6BQ9H3T3 888 aa12.03□□□□□ -0.48
TMCO1-209ENST00000628579 NCOA5Q9HCD5 579 aaKnown RBP12.03□□□□□ -0.48
TMCO1-209ENST00000628579 TMEM260Q9NX78 707 aa12.03□□□□□ -0.48
TMCO1-209ENST00000628579 PKD2L1Q9P0L9 805 aa12.03□□□□□ -0.48
TMCO1-209ENST00000628579 UBIAD1Q9Y5Z9 338 aa12.03□□□□□ -0.48
TMCO1-209ENST00000628579 CCDC196A0A1B0GTZ2 297 aa12.02□□□□□ -0.49
TMCO1-209ENST00000628579 SMCO2A6NFE2 343 aa12.02□□□□□ -0.49
TMCO1-209ENST00000628579 H3BRB1 525 aa12.02□□□□□ -0.49
TMCO1-209ENST00000628579 SCG2P13521 617 aa12.02□□□□□ -0.49
TMCO1-209ENST00000628579 KCNA2P16389 499 aa12.02□□□□□ -0.49
TMCO1-209ENST00000628579 PDIA3P30101 505 aaKnown RBP12.02□□□□□ -0.49
TMCO1-209ENST00000628579 CCT2P78371 535 aaKnown RBP12.02□□□□□ -0.49
TMCO1-209ENST00000628579 BFSP2Q13515 415 aa12.02□□□□□ -0.49
TMCO1-209ENST00000628579 MTMR1Q13613 665 aa12.02□□□□□ -0.49
TMCO1-209ENST00000628579 GPNMBQ14956 572 aa12.02□□□□□ -0.49
TMCO1-209ENST00000628579 PKN1Q16512 942 aa12.02□□□□□ -0.49
TMCO1-209ENST00000628579 PFKFB3Q16875 520 aaPredicted RBP12.02□□□□□ -0.49
TMCO1-209ENST00000628579 PPP1R18Q6NYC8 613 aa12.02□□□□□ -0.49
TMCO1-209ENST00000628579 RPUSD2Q8IZ73 545 aaKnown RBP12.02□□□□□ -0.49
TMCO1-209ENST00000628579 RETREG2Q8NC44 543 aa12.02□□□□□ -0.49
TMCO1-209ENST00000628579 CYP2W1Q8TAV3 490 aa12.02□□□□□ -0.49
TMCO1-209ENST00000628579 GPRASP2Q96D09 838 aa12.02□□□□□ -0.49
TMCO1-209ENST00000628579 CDX2Q99626 313 aaPredicted RBP12.02□□□□□ -0.49
TMCO1-209ENST00000628579 SENP7Q9BQF6 1050 aa12.02□□□□□ -0.49
TMCO1-209ENST00000628579 LARP6Q9BRS8 491 aaKnown RBP12.02□□□□□ -0.49
TMCO1-209ENST00000628579 PBX4Q9BYU1 374 aa12.02□□□□□ -0.49
TMCO1-209ENST00000628579 TUT1Q9H6E5 874 aaKnown RBP12.02□□□□□ -0.49
TMCO1-209ENST00000628579 ZSWIM6Q9HCJ5 1215 aa12.02□□□□□ -0.49
TMCO1-209ENST00000628579 STXBP5LQ9Y2K9 1186 aa12.02□□□□□ -0.49
TMCO1-209ENST00000628579 TET1Q8NFU7 2136 aa12.02□□□□□ -0.49
TMCO1-209ENST00000628579 GBF1Q92538 1859 aa12.02□□□□□ -0.49
TMCO1-209ENST00000628579 ZBBXA8MT70 800 aa12.01□□□□□ -0.49
TMCO1-209ENST00000628579 hCG_1984214I3L0E3 225 aa12.01□□□□□ -0.49
TMCO1-209ENST00000628579 EPB41L2O43491 1005 aaKnown RBP12.01□□□□□ -0.49
TMCO1-209ENST00000628579 CENPBP07199 599 aaPredicted RBP12.01□□□□□ -0.49
TMCO1-209ENST00000628579 SMIM10L2AP0DMW4 78 aa12.01□□□□□ -0.49
TMCO1-209ENST00000628579 SMIM10L2BP0DMW5 78 aa12.01□□□□□ -0.49
TMCO1-209ENST00000628579 CKBP12277 381 aa12.01□□□□□ -0.49
TMCO1-209ENST00000628579 CLK2P49760 499 aaKnown RBP12.01□□□□□ -0.49
TMCO1-209ENST00000628579 EVCP57679 992 aa12.01□□□□□ -0.49
TMCO1-209ENST00000628579 NTRK3Q16288 839 aa12.01□□□□□ -0.49
TMCO1-209ENST00000628579 TRIM71Q2Q1W2 868 aaKnown RBP12.01□□□□□ -0.49
TMCO1-209ENST00000628579 UTP14CQ5TAP6 766 aaKnown RBP12.01□□□□□ -0.49
TMCO1-209ENST00000628579 ZNF713Q8N859 430 aaPredicted RBP12.01□□□□□ -0.49
TMCO1-209ENST00000628579 CAGE1Q8TC20 777 aa12.01□□□□□ -0.49
TMCO1-209ENST00000628579 TIFAQ96CG3 184 aa12.01□□□□□ -0.49
TMCO1-209ENST00000628579 ANO3Q9BYT9 981 aa12.01□□□□□ -0.49
TMCO1-209ENST00000628579 JADE2Q9NQC1 790 aa12.01□□□□□ -0.49
TMCO1-209ENST00000628579 CYP46A1Q9Y6A2 500 aa12.01□□□□□ -0.49
TMCO1-209ENST00000628579 CHD7Q9P2D1 2997 aa12.01□□□□□ -0.49
TMCO1-209ENST00000628579 PRUNE2Q8WUY3 3088 aa12.01□□□□□ -0.49
TMCO1-209ENST00000628579 UNC80Q8N2C7 3258 aa12.01□□□□□ -0.49
TMCO1-209ENST00000628579 PRPF3O43395 683 aaKnown RBP12□□□□□ -0.49
TMCO1-209ENST00000628579 PFKMP08237 780 aa12□□□□□ -0.49
TMCO1-209ENST00000628579 SELPP16109 830 aa12□□□□□ -0.49
TMCO1-209ENST00000628579 HOXC8P31273 242 aa12□□□□□ -0.49
TMCO1-209ENST00000628579 RFC2P35250 354 aa12□□□□□ -0.49
TMCO1-209ENST00000628579 RABGGTBP53611 331 aa12□□□□□ -0.49
TMCO1-209ENST00000628579 RBL2Q08999 1139 aa12□□□□□ -0.49
TMCO1-209ENST00000628579 PTK7Q13308 1070 aa12□□□□□ -0.49
TMCO1-209ENST00000628579 JAKMIP3Q5VZ66 844 aa12□□□□□ -0.49
TMCO1-209ENST00000628579 TRAF7Q6Q0C0 670 aa12□□□□□ -0.49
TMCO1-209ENST00000628579 LRRC8DQ7L1W4 858 aa12□□□□□ -0.49
TMCO1-209ENST00000628579 CCDC155Q8N6L0 562 aa12□□□□□ -0.49
TMCO1-209ENST00000628579 AFAP1L1Q8TED9 768 aa12□□□□□ -0.49
TMCO1-209ENST00000628579 MYLIPQ8WY64 445 aa12□□□□□ -0.49
TMCO1-209ENST00000628579 CDHR1Q96JP9 859 aa12□□□□□ -0.49
TMCO1-209ENST00000628579 FTOQ9C0B1 505 aaKnown RBP eCLIP12□□□□□ -0.49
TMCO1-209ENST00000628579 MTIF3Q9H2K0 278 aaKnown RBP12□□□□□ -0.49
TMCO1-209ENST00000628579 RNPEPQ9H4A4 650 aa12□□□□□ -0.49
TMCO1-209ENST00000628579 EHMT1Q9H9B1 1298 aa12□□□□□ -0.49
TMCO1-209ENST00000628579 KCNH7Q9NS40 1196 aa12□□□□□ -0.49
TMCO1-209ENST00000628579 SLC4A7Q9Y6M7 1214 aa12□□□□□ -0.49
TMCO1-209ENST00000628579 A0A0C4DFX4 3053 aa11.99□□□□□ -0.49
TMCO1-209ENST00000628579 TMEM265A0A087WTH1 108 aa11.99□□□□□ -0.49
TMCO1-209ENST00000628579 GSTTP1A0A1W2PQM5 241 aa11.99□□□□□ -0.49
TMCO1-209ENST00000628579 C17orf102A2RUQ5 167 aa11.99□□□□□ -0.49
TMCO1-209ENST00000628579 TREHO43280 583 aa11.99□□□□□ -0.49
TMCO1-209ENST00000628579 NBNO60934 754 aa11.99□□□□□ -0.49
TMCO1-209ENST00000628579 FOSP01100 380 aaPredicted RBP11.99□□□□□ -0.49
TMCO1-209ENST00000628579 ARP10275 920 aa11.99□□□□□ -0.49
TMCO1-209ENST00000628579 MYOGP15173 224 aa11.99□□□□□ -0.49
TMCO1-209ENST00000628579 ATP2A2P16615 1042 aaKnown RBP11.99□□□□□ -0.49
TMCO1-209ENST00000628579 IFNAR1P17181 557 aa11.99□□□□□ -0.49
TMCO1-209ENST00000628579 TCF7P36402 384 aaPredicted RBP11.99□□□□□ -0.49
TMCO1-209ENST00000628579 SREBF1P36956 1147 aa11.99□□□□□ -0.49
TMCO1-209ENST00000628579 AP3B2Q13367 1082 aa11.99□□□□□ -0.49
TMCO1-209ENST00000628579 MBTPS1Q14703 1052 aa11.99□□□□□ -0.49
TMCO1-209ENST00000628579 GRIN2CQ14957 1233 aa11.99□□□□□ -0.49
TMCO1-209ENST00000628579 TCTN1Q2MV58 587 aa11.99□□□□□ -0.49
TMCO1-209ENST00000628579 ZNF618Q5T7W0 954 aa11.99□□□□□ -0.49
TMCO1-209ENST00000628579 SERINC5Q86VE9 423 aa11.99□□□□□ -0.49
TMCO1-209ENST00000628579 GIMAP8Q8ND71 665 aaPredicted RBP11.99□□□□□ -0.49
TMCO1-209ENST00000628579 ATP6V0A1Q93050 837 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms