RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 SLC7A5Q01650 507 aa9.97□□□□□ -0.81
GGA3-222ENST00000621217 ADAM9Q13443 819 aa9.97□□□□□ -0.81
GGA3-222ENST00000621217 ARL6IP4Q66PJ3 421 aaKnown RBP9.97□□□□□ -0.81
GGA3-222ENST00000621217 TTC19Q6DKK2 380 aaPredicted RBP9.97□□□□□ -0.81
GGA3-222ENST00000621217 REXO1L1PQ8IX06 675 aa9.97□□□□□ -0.81
GGA3-222ENST00000621217 NHEJ1Q9H9Q4 299 aaPredicted RBP9.97□□□□□ -0.81
GGA3-222ENST00000621217 SUGCTQ9HAC7 445 aa9.97□□□□□ -0.81
GGA3-222ENST00000621217 RNF181Q9P0P0 153 aa9.97□□□□□ -0.81
GGA3-222ENST00000621217 A0A1B0GTH6 734 aa9.97□□□□□ -0.81
GGA3-222ENST00000621217 POTEB3A0JP26 581 aa9.97□□□□□ -0.81
GGA3-222ENST00000621217 POTECB2RU33 542 aa9.97□□□□□ -0.81
GGA3-222ENST00000621217 ACTN2P35609 894 aa9.97□□□□□ -0.81
GGA3-222ENST00000621217 EIF4A3P38919 411 aaKnown RBP9.97□□□□□ -0.81
GGA3-222ENST00000621217 C2orf54Q08AI8 447 aa9.97□□□□□ -0.81
GGA3-222ENST00000621217 BRD3Q15059 726 aa9.97□□□□□ -0.81
GGA3-222ENST00000621217 POTEBQ6S5H4 581 aa9.97□□□□□ -0.81
GGA3-222ENST00000621217 DPH6Q7L8W6 267 aa9.97□□□□□ -0.81
GGA3-222ENST00000621217 CCDC155Q8N6L0 562 aa9.97□□□□□ -0.81
GGA3-222ENST00000621217 DCPSQ96C86 337 aaKnown RBP9.97□□□□□ -0.81
GGA3-222ENST00000621217 PANX2Q96RD6 677 aa9.97□□□□□ -0.81
GGA3-222ENST00000621217 CEP83Q9Y592 693 aa9.97□□□□□ -0.81
GGA3-222ENST00000621217 ZNF142P52746 1687 aaPredicted RBP9.97□□□□□ -0.81
GGA3-222ENST00000621217 KCPQ6ZWJ8 1503 aa9.97□□□□□ -0.81
GGA3-222ENST00000621217 PPP4CP60510 307 aa9.96□□□□□ -0.81
GGA3-222ENST00000621217 ZNF543Q08ER8 600 aa9.96□□□□□ -0.81
GGA3-222ENST00000621217 FBXL16Q8N461 479 aa9.96□□□□□ -0.81
GGA3-222ENST00000621217 CCDC51Q96ER9 411 aa9.96□□□□□ -0.81
GGA3-222ENST00000621217 INTS13Q9NVM9 706 aa9.96□□□□□ -0.81
GGA3-222ENST00000621217 MAD2L2Q9UI95 211 aa9.96□□□□□ -0.81
GGA3-222ENST00000621217 ASNSP08243 561 aa9.96□□□□□ -0.81
GGA3-222ENST00000621217 GUCY2FP51841 1108 aa9.96□□□□□ -0.81
GGA3-222ENST00000621217 PMS1P54277 932 aaKnown RBP9.96□□□□□ -0.81
GGA3-222ENST00000621217 PPP2R5AQ15172 486 aa9.96□□□□□ -0.81
GGA3-222ENST00000621217 E2F4Q16254 413 aa9.96□□□□□ -0.81
GGA3-222ENST00000621217 SLC9C1Q4G0N8 1177 aa9.96□□□□□ -0.81
GGA3-222ENST00000621217 DPY19L2Q6NUT2 758 aa9.96□□□□□ -0.81
GGA3-222ENST00000621217 MIER3Q7Z3K6 550 aa9.96□□□□□ -0.81
GGA3-222ENST00000621217 CPLX4Q7Z7G2 160 aa9.96□□□□□ -0.81
GGA3-222ENST00000621217 BHMT2Q9H2M3 363 aa9.96□□□□□ -0.81
GGA3-222ENST00000621217 ABCB6Q9NP58 842 aa9.96□□□□□ -0.81
GGA3-222ENST00000621217 ZNF70Q9UC06 446 aaPredicted RBP9.96□□□□□ -0.81
GGA3-222ENST00000621217 MRPL11Q9Y3B7 192 aaKnown RBP9.96□□□□□ -0.81
GGA3-222ENST00000621217 POTEFA5A3E0 1075 aa9.96□□□□□ -0.82
GGA3-222ENST00000621217 GOLGA6CA6NDK9 693 aa9.96□□□□□ -0.82
GGA3-222ENST00000621217 STXBP3O00186 592 aa9.96□□□□□ -0.82
GGA3-222ENST00000621217 GOLGA6DP0CG33 693 aa9.96□□□□□ -0.82
GGA3-222ENST00000621217 POTEIP0CG38 1075 aa9.96□□□□□ -0.82
GGA3-222ENST00000621217 CXCL9Q07325 125 aa9.96□□□□□ -0.82
GGA3-222ENST00000621217 POTEGQ6S5H5 508 aa9.96□□□□□ -0.82
GGA3-222ENST00000621217 POTEEQ6S8J3 1075 aa9.96□□□□□ -0.82
GGA3-222ENST00000621217 CTNNBL1Q8WYA6 563 aaPredicted RBP9.96□□□□□ -0.82
GGA3-222ENST00000621217 NSRP1Q9H0G5 558 aaKnown RBP9.96□□□□□ -0.82
GGA3-222ENST00000621217 MLXIPQ9HAP2 919 aa9.96□□□□□ -0.82
GGA3-222ENST00000621217 GOLGA6AQ9NYA3 693 aa9.96□□□□□ -0.82
GGA3-222ENST00000621217 ANAPC4Q9UJX5 808 aa9.96□□□□□ -0.82
GGA3-222ENST00000621217 KDM3BQ7LBC6 1761 aa9.96□□□□□ -0.82
GGA3-222ENST00000621217 PRPF6O94906 941 aaKnown RBP9.96□□□□□ -0.82
GGA3-222ENST00000621217 FTCDO95954 541 aa9.96□□□□□ -0.82
GGA3-222ENST00000621217 GJC1P36383 396 aa9.96□□□□□ -0.82
GGA3-222ENST00000621217 GMPSP49915 693 aaPredicted RBP9.96□□□□□ -0.82
GGA3-222ENST00000621217 HMGCS2P54868 508 aa9.96□□□□□ -0.82
GGA3-222ENST00000621217 RBBP5Q15291 538 aaKnown RBP9.96□□□□□ -0.82
GGA3-222ENST00000621217 CCDC6Q16204 474 aa9.96□□□□□ -0.82
GGA3-222ENST00000621217 SFMBT2Q5VUG0 894 aa9.96□□□□□ -0.82
GGA3-222ENST00000621217 NAA35Q5VZE5 725 aa9.96□□□□□ -0.82
GGA3-222ENST00000621217 DCAF15Q66K64 600 aa9.96□□□□□ -0.82
GGA3-222ENST00000621217 PPP4R3AQ6IN85 833 aa9.96□□□□□ -0.82
GGA3-222ENST00000621217 RSBN1LQ6PCB5 846 aaPredicted RBP9.96□□□□□ -0.82
GGA3-222ENST00000621217 EFCAB13Q8IY85 973 aa9.96□□□□□ -0.82
GGA3-222ENST00000621217 NUP58Q9BVL2 599 aa9.96□□□□□ -0.82
GGA3-222ENST00000621217 NDST4Q9H3R1 872 aa9.96□□□□□ -0.82
GGA3-222ENST00000621217 HAUS4Q9H6D7 363 aa9.96□□□□□ -0.82
GGA3-222ENST00000621217 ANKRD65E5RJM6 399 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 ZNF185O15231 689 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 CYTH3O43739 400 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 NR2F2P24468 414 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 EEF1GP26641 437 aaKnown RBP9.95□□□□□ -0.82
GGA3-222ENST00000621217 LIG3P49916 1009 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 EHHADHQ08426 723 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 ANGEL2Q5VTE6 544 aaKnown RBP9.95□□□□□ -0.82
GGA3-222ENST00000621217 GALNT17Q6IS24 598 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 NLRX1Q86UT6 975 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 FAM133AQ8N9E0 248 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 RABGGTAQ92696 567 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 ZNF577Q9BSK1 485 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 TRIM9Q9C026 710 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 JMJD4Q9H9V9 463 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 SPATS2LQ9NUQ6 558 aaKnown RBP9.95□□□□□ -0.82
GGA3-222ENST00000621217 SMARCAL1Q9NZC9 954 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 A0A087WUV0 522 aaPredicted RBP9.95□□□□□ -0.82
GGA3-222ENST00000621217 ANKRD62A6NC57 917 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 PLSCR1O15162 318 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 CEP104O60308 925 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 ARHGAP4P98171 946 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 KIAA0753Q2KHM9 967 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 CEP85LQ5SZL2 805 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 C8orf74Q6P047 294 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 ZKSCAN4Q969J2 545 aaPredicted RBP9.95□□□□□ -0.82
GGA3-222ENST00000621217 DHTKD1Q96HY7 919 aaPredicted RBP9.95□□□□□ -0.82
GGA3-222ENST00000621217 RGL1Q9NZL6 768 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms