RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 CD209Q9NNX6 404 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 MYH3P11055 1940 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 CICQ96RK0 1608 aaPredicted RBP11.78□□□□□ -0.52
CDH1-214ENST00000621016 DISP2A7MBM2 1401 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 NID2Q14112 1375 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 PDE2AO00408 941 aaPredicted RBP11.78□□□□□ -0.52
CDH1-214ENST00000621016 RPS6KA5O75582 802 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 TM4SF1P30408 202 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 EIF4A3P38919 411 aaKnown RBP11.78□□□□□ -0.52
CDH1-214ENST00000621016 ATP1A2P50993 1020 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 RASSF7Q02833 373 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 SHROOM1Q2M3G4 852 aaPredicted RBP11.78□□□□□ -0.52
CDH1-214ENST00000621016 CCDC40Q4G0X9 1142 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 SLC30A10Q6XR72 485 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 MAEAQ7L5Y9 396 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 KIAA0895Q8NCT3 520 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 KBTBD4Q9NVX7 518 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 USP17L15C9J2P7 530 aa11.77□□□□□ -0.52
CDH1-214ENST00000621016 USP17L13C9JLJ4 530 aa11.77□□□□□ -0.52
CDH1-214ENST00000621016 USP17L11C9JVI0 530 aa11.77□□□□□ -0.52
CDH1-214ENST00000621016 USP17L18D6R9N7 530 aa11.77□□□□□ -0.52
CDH1-214ENST00000621016 USP17L22D6RA61 530 aa11.77□□□□□ -0.52
CDH1-214ENST00000621016 USP17L17D6RBQ6 530 aa11.77□□□□□ -0.52
CDH1-214ENST00000621016 USP17L19D6RCP7 530 aa11.77□□□□□ -0.52
CDH1-214ENST00000621016 USP17L20D6RJB6 530 aa11.77□□□□□ -0.52
CDH1-214ENST00000621016 RPS6KA4O75676 772 aa11.77□□□□□ -0.52
CDH1-214ENST00000621016 LDHCP07864 332 aa11.77□□□□□ -0.52
CDH1-214ENST00000621016 KRT83P78385 493 aa11.77□□□□□ -0.52
CDH1-214ENST00000621016 GFPT1Q06210 699 aaPredicted RBP11.77□□□□□ -0.52
CDH1-214ENST00000621016 USP17L24Q0WX57 530 aa11.77□□□□□ -0.52
CDH1-214ENST00000621016 SBK1Q52WX2 424 aa11.77□□□□□ -0.52
CDH1-214ENST00000621016 NFRKBQ6P4R8 1299 aa11.77□□□□□ -0.52
CDH1-214ENST00000621016 USP17L6PQ6QN14 398 aa11.77□□□□□ -0.52
CDH1-214ENST00000621016 COG1Q8WTW3 980 aa11.77□□□□□ -0.52
CDH1-214ENST00000621016 PYM1Q9BRP8 204 aaKnown RBP11.77□□□□□ -0.52
CDH1-214ENST00000621016 HAUS4Q9H6D7 363 aa11.77□□□□□ -0.52
CDH1-214ENST00000621016 CAPN11Q9UMQ6 739 aa11.77□□□□□ -0.52
CDH1-214ENST00000621016 L1RE1Q9UN81 338 aa11.77□□□□□ -0.52
CDH1-214ENST00000621016 PACSIN2Q9UNF0 486 aaPredicted RBP11.77□□□□□ -0.52
CDH1-214ENST00000621016 SPATA31A5Q5VU36 1347 aa11.77□□□□□ -0.53
CDH1-214ENST00000621016 SPATA31A7Q8IWB4 1347 aa11.77□□□□□ -0.53
CDH1-214ENST00000621016 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.77□□□□□ -0.53
CDH1-214ENST00000621016 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.77□□□□□ -0.53
CDH1-214ENST00000621016 OPLAHO14841 1288 aa11.77□□□□□ -0.53
CDH1-214ENST00000621016 AKR1B1P15121 316 aa11.77□□□□□ -0.53
CDH1-214ENST00000621016 CCNE1P24864 410 aa11.77□□□□□ -0.53
CDH1-214ENST00000621016 EEF1GP26641 437 aaKnown RBP11.77□□□□□ -0.53
CDH1-214ENST00000621016 MYO1EQ12965 1108 aa11.77□□□□□ -0.53
CDH1-214ENST00000621016 WHAMMP3Q1A5X7 153 aa11.77□□□□□ -0.53
CDH1-214ENST00000621016 EZH1Q92800 747 aaPredicted RBP11.77□□□□□ -0.53
CDH1-214ENST00000621016 CAPN6Q9Y6Q1 641 aa11.77□□□□□ -0.53
CDH1-214ENST00000621016 PALM3A6NDB9 673 aaPredicted RBP11.76□□□□□ -0.53
CDH1-214ENST00000621016 MEIS1O00470 390 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 RHOBTB3O94955 611 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 IRAK1P51617 712 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 TRIM14Q14142 442 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 FAM71BQ8TC56 605 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 MS4A14Q96JA4 679 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 TACO1Q9BSH4 297 aaKnown RBP11.76□□□□□ -0.53
CDH1-214ENST00000621016 MYH6P13533 1939 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 GSTO1P78417 241 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 AMPD3Q01432 767 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 KRT79Q5XKE5 535 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 CAPRIN2Q6IMN6 1127 aaKnown RBP11.76□□□□□ -0.53
CDH1-214ENST00000621016 ARMC9Q7Z3E5 817 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 KRT25Q7Z3Z0 450 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 ANKRD23Q86SG2 305 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 NOC3LQ8WTT2 800 aaKnown RBP11.76□□□□□ -0.53
CDH1-214ENST00000621016 DDX12PQ92771 950 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 CCDC114Q96M63 670 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 ITIH6Q6UXX5 1313 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 SHANK3Q9BYB0 1731 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 ESYT3A0FGR9 886 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 RASSF10A6NK89 507 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 LRRC53A6NM62 1247 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 E9PMD0 336 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 ZNF263O14978 683 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 STAT3P40763 770 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 IFT88Q13099 833 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 ZNF507Q8TCN5 953 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 LARP4BQ92615 738 aaKnown RBP11.76□□□□□ -0.53
CDH1-214ENST00000621016 MMTAG2Q9BU76 263 aaKnown RBP11.76□□□□□ -0.53
CDH1-214ENST00000621016 NDST4Q9H3R1 872 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 GOLPH3Q9H4A6 298 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 BAIAP2L1Q9UHR4 511 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 GGA1Q9UJY5 639 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 FLT1P17948 1338 aa11.76□□□□□ -0.53
CDH1-214ENST00000621016 BICDL2A1A5D9 508 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 PPFIA2O75334 1257 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 SRGNP10124 158 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 CA8P35219 290 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 EPS15P42566 896 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 PDCLQ13371 301 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 TMEM266Q2M3C6 531 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 USH1GQ495M9 461 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 IFT81Q8WYA0 676 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 PHACTR1Q9C0D0 580 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 THAP9Q9H5L6 903 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 ZNF287Q9HBT7 754 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 USP17L10C9JJH3 530 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms