RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 MYCNP04198 464 aaPredicted RBP15.45■□□□□ 0.06
NEK3-210ENST00000620675 TRAPPC10P48553 1259 aa15.45■□□□□ 0.06
NEK3-210ENST00000620675 PTGDRQ13258 359 aa15.45■□□□□ 0.06
NEK3-210ENST00000620675 CELF3Q5SZQ8 465 aaKnown RBP15.45■□□□□ 0.06
NEK3-210ENST00000620675 SLC5A5Q92911 643 aa15.45■□□□□ 0.06
NEK3-210ENST00000620675 ZSCAN16Q9H4T2 348 aaPredicted RBP15.45■□□□□ 0.06
NEK3-210ENST00000620675 ADAMTS4O75173 837 aa15.44■□□□□ 0.06
NEK3-210ENST00000620675 DUSP11O75319 330 aaKnown RBP15.44■□□□□ 0.06
NEK3-210ENST00000620675 CCNE2O96020 404 aa15.44■□□□□ 0.06
NEK3-210ENST00000620675 TGFB3P10600 412 aa15.44■□□□□ 0.06
NEK3-210ENST00000620675 RARBP10826 455 aa15.44■□□□□ 0.06
NEK3-210ENST00000620675 GCFC2P16383 781 aaKnown RBP15.44■□□□□ 0.06
NEK3-210ENST00000620675 SETQ01105 290 aaPredicted RBP15.44■□□□□ 0.06
NEK3-210ENST00000620675 DNM1Q05193 864 aaKnown RBP15.44■□□□□ 0.06
NEK3-210ENST00000620675 SF3A1Q15459 793 aaKnown RBP15.44■□□□□ 0.06
NEK3-210ENST00000620675 IL17AQ16552 155 aa15.44■□□□□ 0.06
NEK3-210ENST00000620675 OR6J1Q8NGC5 347 aa15.44■□□□□ 0.06
NEK3-210ENST00000620675 AFG1LQ8WV93 481 aa15.44■□□□□ 0.06
NEK3-210ENST00000620675 MTMR9Q96QG7 549 aa15.44■□□□□ 0.06
NEK3-210ENST00000620675 XPNPEP3Q9NQH7 507 aa15.44■□□□□ 0.06
NEK3-210ENST00000620675 KAT6AQ92794 2004 aa15.44■□□□□ 0.06
NEK3-210ENST00000620675 CALCRLQ16602 461 aa15.44■□□□□ 0.06
NEK3-210ENST00000620675 DHX37Q8IY37 1157 aaKnown RBP15.44■□□□□ 0.06
NEK3-210ENST00000620675 SENP7Q9BQF6 1050 aa15.44■□□□□ 0.06
NEK3-210ENST00000620675 PSMD10O75832 226 aa15.43■□□□□ 0.06
NEK3-210ENST00000620675 C6orf222P0C671 652 aaPredicted RBP15.43■□□□□ 0.06
NEK3-210ENST00000620675 U2AF1L4Q8WU68 220 aaKnown RBP15.43■□□□□ 0.06
NEK3-210ENST00000620675 PPP1R13LQ8WUF5 828 aa15.43■□□□□ 0.06
NEK3-210ENST00000620675 CDHR1Q96JP9 859 aa15.43■□□□□ 0.06
NEK3-210ENST00000620675 MAFGO15525 162 aa15.42■□□□□ 0.06
NEK3-210ENST00000620675 CHMP2AO43633 222 aa15.42■□□□□ 0.06
NEK3-210ENST00000620675 GH1P01241 217 aa15.42■□□□□ 0.06
NEK3-210ENST00000620675 TXKP42681 527 aa15.42■□□□□ 0.06
NEK3-210ENST00000620675 GRIN1Q05586 938 aa15.42■□□□□ 0.06
NEK3-210ENST00000620675 PTPAQ15257 358 aa15.42■□□□□ 0.06
NEK3-210ENST00000620675 LRCH2Q5VUJ6 765 aa15.42■□□□□ 0.06
NEK3-210ENST00000620675 KCNV1Q6PIU1 500 aa15.42■□□□□ 0.06
NEK3-210ENST00000620675 METTL7BQ6UX53 244 aa15.42■□□□□ 0.06
NEK3-210ENST00000620675 ABHD8Q96I13 439 aa15.42■□□□□ 0.06
NEK3-210ENST00000620675 SPATA33Q96N06 139 aa15.42■□□□□ 0.06
NEK3-210ENST00000620675 UNC45AQ9H3U1 944 aa15.42■□□□□ 0.06
NEK3-210ENST00000620675 MLXIPQ9HAP2 919 aa15.42■□□□□ 0.06
NEK3-210ENST00000620675 VAV3Q9UKW4 847 aa15.42■□□□□ 0.06
NEK3-210ENST00000620675 SCN10AQ9Y5Y9 1956 aa15.42■□□□□ 0.06
NEK3-210ENST00000620675 EML1O00423 815 aa15.42■□□□□ 0.06
NEK3-210ENST00000620675 GJB1P08034 283 aa15.42■□□□□ 0.06
NEK3-210ENST00000620675 MNX1P50219 401 aaPredicted RBP15.42■□□□□ 0.06
NEK3-210ENST00000620675 GJA9P57773 515 aa15.42■□□□□ 0.06
NEK3-210ENST00000620675 SPIRE1Q08AE8 756 aa15.42■□□□□ 0.06
NEK3-210ENST00000620675 NEDD9Q14511 834 aa15.42■□□□□ 0.06
NEK3-210ENST00000620675 LRRC41Q15345 812 aa15.42■□□□□ 0.06
NEK3-210ENST00000620675 UPF3AQ9H1J1 476 aaKnown RBP15.42■□□□□ 0.06
NEK3-210ENST00000620675 JPH1Q9HDC5 661 aaPredicted RBP15.42■□□□□ 0.06
NEK3-210ENST00000620675 GSTTP1A0A1W2PQM5 241 aa15.41■□□□□ 0.06
NEK3-210ENST00000620675 GAS7O60861 476 aa15.41■□□□□ 0.06
NEK3-210ENST00000620675 SGPL1O95470 568 aa15.41■□□□□ 0.06
NEK3-210ENST00000620675 OR52Z1P0C646 297 aa15.41■□□□□ 0.06
NEK3-210ENST00000620675 MARCKSP29966 332 aaPredicted RBP15.41■□□□□ 0.06
NEK3-210ENST00000620675 NUCB2P80303 420 aa15.41■□□□□ 0.06
NEK3-210ENST00000620675 B3GNT9Q6UX72 402 aa15.41■□□□□ 0.06
NEK3-210ENST00000620675 TRIM50Q86XT4 487 aa15.41■□□□□ 0.06
NEK3-210ENST00000620675 KLHDC9Q8NEP7 349 aa15.41■□□□□ 0.06
NEK3-210ENST00000620675 GPR20Q99678 358 aa15.41■□□□□ 0.06
NEK3-210ENST00000620675 SLC9A2Q9UBY0 812 aa15.41■□□□□ 0.06
NEK3-210ENST00000620675 NFASCO94856 1347 aa15.41■□□□□ 0.06
NEK3-210ENST00000620675 POTEMA6NI47 508 aa15.4■□□□□ 0.06
NEK3-210ENST00000620675 NKRFO15226 690 aaKnown RBP eCLIP15.4■□□□□ 0.06
NEK3-210ENST00000620675 MMP3P08254 477 aa15.4■□□□□ 0.06
NEK3-210ENST00000620675 PDIA4P13667 645 aaKnown RBP15.4■□□□□ 0.06
NEK3-210ENST00000620675 ACTR2P61160 394 aa15.4■□□□□ 0.06
NEK3-210ENST00000620675 ATP2C1P98194 919 aaPredicted RBP15.4■□□□□ 0.06
NEK3-210ENST00000620675 FSCN1Q16658 493 aaKnown RBP15.4■□□□□ 0.06
NEK3-210ENST00000620675 GNASQ5JWF2 1037 aa15.4■□□□□ 0.06
NEK3-210ENST00000620675 CCSAPQ6IQ19 270 aaPredicted RBP15.4■□□□□ 0.06
NEK3-210ENST00000620675 DIS3LQ8TF46 1054 aaKnown RBP15.4■□□□□ 0.06
NEK3-210ENST00000620675 NAP1L4Q99733 375 aaKnown RBP15.4■□□□□ 0.06
NEK3-210ENST00000620675 SDF4Q9BRK5 362 aa15.4■□□□□ 0.06
NEK3-210ENST00000620675 CRISPLD2Q9H0B8 497 aa15.4■□□□□ 0.06
NEK3-210ENST00000620675 AP5M1Q9H0R1 490 aa15.4■□□□□ 0.06
NEK3-210ENST00000620675 TTC12Q9H892 705 aaPredicted RBP15.4■□□□□ 0.06
NEK3-210ENST00000620675 OGDHLQ9ULD0 1010 aa15.4■□□□□ 0.06
NEK3-210ENST00000620675 EVPLQ92817 2033 aa15.4■□□□□ 0.06
NEK3-210ENST00000620675 A6NJR5 290 aa15.4■□□□□ 0.06
NEK3-210ENST00000620675 ZNF286BP0CG31 522 aa15.4■□□□□ 0.06
NEK3-210ENST00000620675 EN2P19622 333 aaPredicted RBP15.4■□□□□ 0.06
NEK3-210ENST00000620675 TECP42680 631 aa15.4■□□□□ 0.06
NEK3-210ENST00000620675 LAMC2Q13753 1193 aa15.4■□□□□ 0.06
NEK3-210ENST00000620675 TNS4Q8IZW8 715 aa15.4■□□□□ 0.06
NEK3-210ENST00000620675 EMID1Q96A84 441 aaPredicted RBP15.4■□□□□ 0.06
NEK3-210ENST00000620675 PCYT2Q99447 389 aa15.4■□□□□ 0.06
NEK3-210ENST00000620675 GDPD2Q9HCC8 539 aa15.4■□□□□ 0.06
NEK3-210ENST00000620675 CHMP5Q9NZZ3 219 aa15.4■□□□□ 0.06
NEK3-210ENST00000620675 CIZ1Q9ULV3 898 aaPredicted RBP15.4■□□□□ 0.06
NEK3-210ENST00000620675 CEP290O15078 2479 aa15.39■□□□□ 0.05
NEK3-210ENST00000620675 TBX3O15119 743 aa15.39■□□□□ 0.05
NEK3-210ENST00000620675 MSCO60682 206 aa15.39■□□□□ 0.05
NEK3-210ENST00000620675 CDC25AP30304 524 aa15.39■□□□□ 0.05
NEK3-210ENST00000620675 GJA8P48165 433 aa15.39■□□□□ 0.05
NEK3-210ENST00000620675 KCNA10Q16322 511 aa15.39■□□□□ 0.05
NEK3-210ENST00000620675 PPTC7Q8NI37 304 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms