RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 CGNQ9P2M7 1197 aaKnown RBP11.98□□□□□ -0.49
POLR2A-209ENST00000617998 MAGEB2O15479 319 aa11.97□□□□□ -0.49
POLR2A-209ENST00000617998 MCPH1Q8NEM0 835 aa11.97□□□□□ -0.49
POLR2A-209ENST00000617998 ACCSQ96QU6 501 aa11.97□□□□□ -0.49
POLR2A-209ENST00000617998 AKR1B1P15121 316 aa11.97□□□□□ -0.49
POLR2A-209ENST00000617998 CAP2P40123 477 aa11.97□□□□□ -0.49
POLR2A-209ENST00000617998 ILDR2Q71H61 639 aa11.97□□□□□ -0.49
POLR2A-209ENST00000617998 ACSF2Q96CM8 615 aaPredicted RBP11.97□□□□□ -0.49
POLR2A-209ENST00000617998 SH3BP1Q9Y3L3 701 aa11.97□□□□□ -0.49
POLR2A-209ENST00000617998 PGK2P07205 417 aa11.97□□□□□ -0.49
POLR2A-209ENST00000617998 MCAMP43121 646 aa11.97□□□□□ -0.49
POLR2A-209ENST00000617998 PTGDRQ13258 359 aa11.97□□□□□ -0.49
POLR2A-209ENST00000617998 TDRD7Q8NHU6 1098 aaKnown RBP11.97□□□□□ -0.49
POLR2A-209ENST00000617998 USP26Q9BXU7 913 aa11.97□□□□□ -0.49
POLR2A-209ENST00000617998 F8W8V4 182 aa11.97□□□□□ -0.49
POLR2A-209ENST00000617998 SLFN12LQ6IEE8 588 aa11.97□□□□□ -0.49
POLR2A-209ENST00000617998 TADA2BQ86TJ2 420 aa11.97□□□□□ -0.49
POLR2A-209ENST00000617998 RPAP1Q9BWH6 1393 aaPredicted RBP11.97□□□□□ -0.49
POLR2A-209ENST00000617998 POTEB3A0JP26 581 aa11.97□□□□□ -0.49
POLR2A-209ENST00000617998 PHLPP1O60346 1717 aa11.97□□□□□ -0.49
POLR2A-209ENST00000617998 CCDC15Q0P6D6 951 aa11.97□□□□□ -0.49
POLR2A-209ENST00000617998 GIMAP6Q6P9H5 292 aa11.97□□□□□ -0.49
POLR2A-209ENST00000617998 POTEBQ6S5H4 581 aa11.97□□□□□ -0.49
POLR2A-209ENST00000617998 STAMQ92783 540 aa11.97□□□□□ -0.49
POLR2A-209ENST00000617998 SKA1Q96BD8 255 aa11.97□□□□□ -0.49
POLR2A-209ENST00000617998 JPH1Q9HDC5 661 aaPredicted RBP11.97□□□□□ -0.49
POLR2A-209ENST00000617998 ZBTB40Q9NUA8 1239 aa11.97□□□□□ -0.49
POLR2A-209ENST00000617998 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.97□□□□□ -0.49
POLR2A-209ENST00000617998 NKRFO15226 690 aaKnown RBP eCLIP11.96□□□□□ -0.49
POLR2A-209ENST00000617998 GBP1P32455 592 aa11.96□□□□□ -0.49
POLR2A-209ENST00000617998 ERAP1Q9NZ08 941 aa11.96□□□□□ -0.49
POLR2A-209ENST00000617998 ZC3H13Q5T200 1668 aaKnown RBP11.96□□□□□ -0.49
POLR2A-209ENST00000617998 GIPC1O14908 333 aa11.96□□□□□ -0.49
POLR2A-209ENST00000617998 FLT3LGP49771 235 aa11.96□□□□□ -0.49
POLR2A-209ENST00000617998 STX17P56962 302 aa11.96□□□□□ -0.49
POLR2A-209ENST00000617998 CCDC85BQ15834 202 aaPredicted RBP11.96□□□□□ -0.49
POLR2A-209ENST00000617998 PPP1R21Q6ZMI0 780 aa11.96□□□□□ -0.49
POLR2A-209ENST00000617998 DBR1Q9UK59 544 aaKnown RBP11.96□□□□□ -0.49
POLR2A-209ENST00000617998 N4BP1O75113 896 aaKnown RBP11.96□□□□□ -0.49
POLR2A-209ENST00000617998 GJB1P08034 283 aa11.96□□□□□ -0.49
POLR2A-209ENST00000617998 DNAJB2P25686 324 aa11.96□□□□□ -0.49
POLR2A-209ENST00000617998 E2F5Q15329 346 aa11.96□□□□□ -0.49
POLR2A-209ENST00000617998 NME8Q8N427 588 aa11.96□□□□□ -0.49
POLR2A-209ENST00000617998 PPP1R9BQ96SB3 815 aa11.96□□□□□ -0.49
POLR2A-209ENST00000617998 DDX50Q9BQ39 737 aaKnown RBP11.96□□□□□ -0.49
POLR2A-209ENST00000617998 PRG3Q9Y2Y8 225 aaPredicted RBP11.96□□□□□ -0.49
POLR2A-209ENST00000617998 STAM2O75886 525 aa11.96□□□□□ -0.5
POLR2A-209ENST00000617998 RALAP11233 206 aa11.96□□□□□ -0.5
POLR2A-209ENST00000617998 MAP2K2P36507 400 aa11.96□□□□□ -0.5
POLR2A-209ENST00000617998 STX1AQ16623 288 aa11.96□□□□□ -0.5
POLR2A-209ENST00000617998 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.96□□□□□ -0.5
POLR2A-209ENST00000617998 UBN1Q9NPG3 1134 aa11.96□□□□□ -0.5
POLR2A-209ENST00000617998 PANK4Q9NVE7 773 aa11.96□□□□□ -0.5
POLR2A-209ENST00000617998 GOLGA8CPA6NN73 597 aa11.96□□□□□ -0.5
POLR2A-209ENST00000617998 STXBP3O00186 592 aa11.96□□□□□ -0.5
POLR2A-209ENST00000617998 GJC2Q5T442 439 aaPredicted RBP11.96□□□□□ -0.5
POLR2A-209ENST00000617998 KRT40Q6A162 431 aa11.96□□□□□ -0.5
POLR2A-209ENST00000617998 LRRC4BQ9NT99 713 aa11.96□□□□□ -0.5
POLR2A-209ENST00000617998 HPCAL4Q9UM19 191 aa11.96□□□□□ -0.5
POLR2A-209ENST00000617998 TBKBP1A7MCY6 615 aa11.95□□□□□ -0.5
POLR2A-209ENST00000617998 RAD51Q06609 339 aa11.95□□□□□ -0.5
POLR2A-209ENST00000617998 VGLL4Q14135 290 aa11.95□□□□□ -0.5
POLR2A-209ENST00000617998 DGKHQ86XP1 1220 aa11.95□□□□□ -0.5
POLR2A-209ENST00000617998 DCP1AQ9NPI6 582 aaPredicted RBP11.95□□□□□ -0.5
POLR2A-209ENST00000617998 THG1LQ9NWX6 298 aaKnown RBP11.95□□□□□ -0.5
POLR2A-209ENST00000617998 USP25Q9UHP3 1055 aa11.95□□□□□ -0.5
POLR2A-209ENST00000617998 TNNQ9UQP3 1299 aa11.95□□□□□ -0.5
POLR2A-209ENST00000617998 CLDN3O15551 220 aa11.95□□□□□ -0.5
POLR2A-209ENST00000617998 SPOPO43791 374 aa11.95□□□□□ -0.5
POLR2A-209ENST00000617998 FGBP02675 491 aa11.95□□□□□ -0.5
POLR2A-209ENST00000617998 TTBK2Q6IQ55 1244 aa11.95□□□□□ -0.5
POLR2A-209ENST00000617998 SPATA2LQ8IUW3 424 aaPredicted RBP11.95□□□□□ -0.5
POLR2A-209ENST00000617998 SEPT5Q99719 369 aaPredicted RBP11.95□□□□□ -0.5
POLR2A-209ENST00000617998 KIF5CO60282 957 aa11.95□□□□□ -0.5
POLR2A-209ENST00000617998 ARHGAP44Q17R89 818 aa11.95□□□□□ -0.5
POLR2A-209ENST00000617998 FAM83AQ86UY5 434 aa11.95□□□□□ -0.5
POLR2A-209ENST00000617998 TRPM4Q8TD43 1214 aa11.95□□□□□ -0.5
POLR2A-209ENST00000617998 TBCKQ8TEA7 893 aa11.95□□□□□ -0.5
POLR2A-209ENST00000617998 PREX1Q8TCU6 1659 aa11.95□□□□□ -0.5
POLR2A-209ENST00000617998 CCL23P55773 120 aa11.95□□□□□ -0.5
POLR2A-209ENST00000617998 HSP90AA4PQ58FG1 418 aa11.95□□□□□ -0.5
POLR2A-209ENST00000617998 SUGP1Q8IWZ8 645 aaKnown RBP11.95□□□□□ -0.5
POLR2A-209ENST00000617998 UCMAQ8WVF2 138 aa11.95□□□□□ -0.5
POLR2A-209ENST00000617998 G3BP2Q9UN86 482 aaKnown RBP11.95□□□□□ -0.5
POLR2A-209ENST00000617998 CYLC1P35663 651 aaPredicted RBP11.95□□□□□ -0.5
POLR2A-209ENST00000617998 MDM2Q00987 491 aaPredicted RBP11.95□□□□□ -0.5
POLR2A-209ENST00000617998 GEN1Q17RS7 908 aa11.95□□□□□ -0.5
POLR2A-209ENST00000617998 FIBCD1Q8N539 461 aa11.95□□□□□ -0.5
POLR2A-209ENST00000617998 MMTAG2Q9BU76 263 aaKnown RBP11.95□□□□□ -0.5
POLR2A-209ENST00000617998 PCDHA4Q9UN74 947 aa11.95□□□□□ -0.5
POLR2A-209ENST00000617998 TERF1P54274 439 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 TEX2Q8IWB9 1127 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 IQCGQ9H095 443 aaKnown RBP11.94□□□□□ -0.5
POLR2A-209ENST00000617998 ASCC2Q9H1I8 757 aaPredicted RBP11.94□□□□□ -0.5
POLR2A-209ENST00000617998 RASAL2Q9UJF2 1139 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 FLT1P17948 1338 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 PER1O15534 1290 aaPredicted RBP11.94□□□□□ -0.5
POLR2A-209ENST00000617998 ZC3H11AO75152 810 aaKnown RBP eCLIP11.94□□□□□ -0.55e-6■□□□□ 8.5
POLR2A-209ENST00000617998 ADORA2AP29274 412 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 ZNF784Q8NCA9 323 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms