RNA–Protein interactions for RNA: ENST00000617558.2

AL662899.3-202, humanhuman

TSL 1 (best) BASIC

Gene AL662899.3, Length 991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL662899.3-202ENST00000617558 ZNF577Q9BSK1 485 aa13.19□□□□□ -0.3
AL662899.3-202ENST00000617558 MCOLN1Q9GZU1 580 aa13.19□□□□□ -0.3
AL662899.3-202ENST00000617558 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.19□□□□□ -0.31e-6■■□□□ 11.6
AL662899.3-202ENST00000617558 TMEM60Q9H2L4 133 aa13.19□□□□□ -0.3
AL662899.3-202ENST00000617558 DDX20Q9UHI6 824 aaKnown RBP13.19□□□□□ -0.3
AL662899.3-202ENST00000617558 VAV3Q9UKW4 847 aa13.19□□□□□ -0.3
AL662899.3-202ENST00000617558 MYH9P35579 1960 aaKnown RBP13.18□□□□□ -0.3
AL662899.3-202ENST00000617558 POTEFA5A3E0 1075 aa13.18□□□□□ -0.3
AL662899.3-202ENST00000617558 A6NJR5 290 aa13.18□□□□□ -0.3
AL662899.3-202ENST00000617558 ATP9AO75110 1047 aa13.18□□□□□ -0.3
AL662899.3-202ENST00000617558 GH1P01241 217 aa13.18□□□□□ -0.3
AL662899.3-202ENST00000617558 CCND3P30281 292 aaPredicted RBP13.18□□□□□ -0.3
AL662899.3-202ENST00000617558 FXR2P51116 673 aaKnown RBP eCLIP13.18□□□□□ -0.3
AL662899.3-202ENST00000617558 GJA9P57773 515 aa13.18□□□□□ -0.3
AL662899.3-202ENST00000617558 KRT76Q01546 638 aa13.18□□□□□ -0.3
AL662899.3-202ENST00000617558 PTGDRQ13258 359 aa13.18□□□□□ -0.3
AL662899.3-202ENST00000617558 LAMC2Q13753 1193 aa13.18□□□□□ -0.3
AL662899.3-202ENST00000617558 NBR1Q14596 966 aa13.18□□□□□ -0.3
AL662899.3-202ENST00000617558 SLC39A14Q15043 492 aa13.18□□□□□ -0.3
AL662899.3-202ENST00000617558 PRAMEF19Q5SWL8 479 aa13.18□□□□□ -0.3
AL662899.3-202ENST00000617558 LHX8Q68G74 356 aa13.18□□□□□ -0.3
AL662899.3-202ENST00000617558 ZNF746Q6NUN9 644 aaPredicted RBP13.18□□□□□ -0.3
AL662899.3-202ENST00000617558 FAM173BQ6P4H8 233 aa13.18□□□□□ -0.3
AL662899.3-202ENST00000617558 LINC00301Q8NCQ3 95 aa13.18□□□□□ -0.3
AL662899.3-202ENST00000617558 PPTC7Q8NI37 304 aa13.18□□□□□ -0.3
AL662899.3-202ENST00000617558 JPH1Q9HDC5 661 aaPredicted RBP13.18□□□□□ -0.3
AL662899.3-202ENST00000617558 CFAP45Q9UL16 551 aa13.18□□□□□ -0.3
AL662899.3-202ENST00000617558 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.17□□□□□ -0.3
AL662899.3-202ENST00000617558 CTAGE5O15320 804 aa13.17□□□□□ -0.3
AL662899.3-202ENST00000617558 ADAMTS4O75173 837 aa13.17□□□□□ -0.3
AL662899.3-202ENST00000617558 ATG7O95352 703 aa13.17□□□□□ -0.3
AL662899.3-202ENST00000617558 GGPS1O95749 300 aa13.17□□□□□ -0.3
AL662899.3-202ENST00000617558 RARBP10826 455 aa13.17□□□□□ -0.3
AL662899.3-202ENST00000617558 SF3A1Q15459 793 aaKnown RBP13.17□□□□□ -0.3
AL662899.3-202ENST00000617558 LRCH2Q5VUJ6 765 aa13.17□□□□□ -0.3
AL662899.3-202ENST00000617558 TLK2Q86UE8 772 aa13.17□□□□□ -0.3
AL662899.3-202ENST00000617558 SMAP1Q8IYB5 467 aaPredicted RBP13.17□□□□□ -0.3
AL662899.3-202ENST00000617558 IGSF22Q8N9C0 903 aa13.17□□□□□ -0.3
AL662899.3-202ENST00000617558 FERMT2Q96AC1 680 aa13.17□□□□□ -0.3
AL662899.3-202ENST00000617558 SDF4Q9BRK5 362 aa13.17□□□□□ -0.3
AL662899.3-202ENST00000617558 CRISPLD2Q9H0B8 497 aa13.17□□□□□ -0.3
AL662899.3-202ENST00000617558 ELP1O95163 1332 aa13.16□□□□□ -0.3
AL662899.3-202ENST00000617558 SYNRGQ9UMZ2 1314 aa13.16□□□□□ -0.3
AL662899.3-202ENST00000617558 LOXHD1Q8IVV2 1947 aa13.16□□□□□ -0.3
AL662899.3-202ENST00000617558 GAS7O60861 476 aa13.16□□□□□ -0.3
AL662899.3-202ENST00000617558 PPP6R2O75170 966 aa13.16□□□□□ -0.3
AL662899.3-202ENST00000617558 BAG4O95429 457 aaKnown RBP13.16□□□□□ -0.3
AL662899.3-202ENST00000617558 GJB1P08034 283 aa13.16□□□□□ -0.3
AL662899.3-202ENST00000617558 CCL5P13501 91 aa13.16□□□□□ -0.3
AL662899.3-202ENST00000617558 SFNP31947 248 aa13.16□□□□□ -0.3
AL662899.3-202ENST00000617558 KRT85P78386 507 aa13.16□□□□□ -0.3
AL662899.3-202ENST00000617558 PDIA5Q14554 519 aa13.16□□□□□ -0.3
AL662899.3-202ENST00000617558 ZNF174Q15697 407 aa13.16□□□□□ -0.3
AL662899.3-202ENST00000617558 LY6KQ17RY6 165 aa13.16□□□□□ -0.3
AL662899.3-202ENST00000617558 CCSAPQ6IQ19 270 aaPredicted RBP13.16□□□□□ -0.3
AL662899.3-202ENST00000617558 KCNG4Q8TDN1 519 aa13.16□□□□□ -0.3
AL662899.3-202ENST00000617558 ZFP91Q96JP5 570 aaPredicted RBP13.16□□□□□ -0.3
AL662899.3-202ENST00000617558 TEKT3Q9BXF9 490 aa13.16□□□□□ -0.3
AL662899.3-202ENST00000617558 FTOQ9C0B1 505 aaKnown RBP eCLIP13.16□□□□□ -0.3
AL662899.3-202ENST00000617558 SCAND2PQ9GZW5 306 aaPredicted RBP13.16□□□□□ -0.3
AL662899.3-202ENST00000617558 UNC93B1Q9H1C4 597 aa13.16□□□□□ -0.3
AL662899.3-202ENST00000617558 SLC9A2Q9UBY0 812 aa13.16□□□□□ -0.3
AL662899.3-202ENST00000617558 RCOR1Q9UKL0 485 aa13.16□□□□□ -0.3
AL662899.3-202ENST00000617558 OGDHLQ9ULD0 1010 aa13.16□□□□□ -0.3
AL662899.3-202ENST00000617558 CLIC4Q9Y696 253 aa13.16□□□□□ -0.3
AL662899.3-202ENST00000617558 EMSYQ7Z589 1322 aa13.15□□□□□ -0.3
AL662899.3-202ENST00000617558 IGKV6D-21A0A0A0MT36 114 aa13.15□□□□□ -0.3
AL662899.3-202ENST00000617558 SLC26A4O43511 780 aa13.15□□□□□ -0.3
AL662899.3-202ENST00000617558 PPFIA4O75335 1185 aa13.15□□□□□ -0.3
AL662899.3-202ENST00000617558 CCNE2O96020 404 aa13.15□□□□□ -0.3
AL662899.3-202ENST00000617558 ATP2B1P20020 1258 aa13.15□□□□□ -0.3
AL662899.3-202ENST00000617558 CPT1AP50416 773 aa13.15□□□□□ -0.3
AL662899.3-202ENST00000617558 JAK3P52333 1124 aa13.15□□□□□ -0.3
AL662899.3-202ENST00000617558 DNM1Q05193 864 aaKnown RBP13.15□□□□□ -0.3
AL662899.3-202ENST00000617558 MTFR1Q15390 333 aa13.15□□□□□ -0.3
AL662899.3-202ENST00000617558 TMEM63BQ5T3F8 832 aa13.15□□□□□ -0.3
AL662899.3-202ENST00000617558 CYFIP1Q7L576 1253 aa13.15□□□□□ -0.3
AL662899.3-202ENST00000617558 DHX37Q8IY37 1157 aaKnown RBP13.15□□□□□ -0.3
AL662899.3-202ENST00000617558 KLHDC9Q8NEP7 349 aa13.15□□□□□ -0.3
AL662899.3-202ENST00000617558 AK8Q96MA6 479 aa13.15□□□□□ -0.3
AL662899.3-202ENST00000617558 GPR20Q99678 358 aa13.15□□□□□ -0.3
AL662899.3-202ENST00000617558 TTC12Q9H892 705 aaPredicted RBP13.15□□□□□ -0.3
AL662899.3-202ENST00000617558 PCDHA12Q9UN75 941 aa13.15□□□□□ -0.3
AL662899.3-202ENST00000617558 SRPRBQ9Y5M8 271 aaKnown RBP13.15□□□□□ -0.3
AL662899.3-202ENST00000617558 WDR64B1ANS9 1081 aa13.14□□□□□ -0.31
AL662899.3-202ENST00000617558 KPNA6O60684 536 aa13.14□□□□□ -0.31
AL662899.3-202ENST00000617558 LGR5O75473 907 aa13.14□□□□□ -0.31
AL662899.3-202ENST00000617558 MMP3P08254 477 aa13.14□□□□□ -0.31
AL662899.3-202ENST00000617558 MUTP22033 750 aa13.14□□□□□ -0.31
AL662899.3-202ENST00000617558 ACTR2P61160 394 aa13.14□□□□□ -0.31
AL662899.3-202ENST00000617558 FSCN1Q16658 493 aaKnown RBP13.14□□□□□ -0.31
AL662899.3-202ENST00000617558 TMEM266Q2M3C6 531 aa13.14□□□□□ -0.31
AL662899.3-202ENST00000617558 HSDL1Q3SXM5 330 aa13.14□□□□□ -0.31
AL662899.3-202ENST00000617558 GJC2Q5T442 439 aaPredicted RBP13.14□□□□□ -0.31
AL662899.3-202ENST00000617558 FOXD4L5Q5VV16 416 aaPredicted RBP13.14□□□□□ -0.31
AL662899.3-202ENST00000617558 ABHD15Q6UXT9 468 aa13.14□□□□□ -0.31
AL662899.3-202ENST00000617558 TMEM87AQ8NBN3 555 aa13.14□□□□□ -0.31
AL662899.3-202ENST00000617558 NEK9Q8TD19 979 aa13.14□□□□□ -0.31
AL662899.3-202ENST00000617558 AFAP1L1Q8TED9 768 aa13.14□□□□□ -0.31
AL662899.3-202ENST00000617558 FOXD4L4Q8WXT5 416 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms