RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 RILPL1Q5EBL4 403 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 BCO2Q9BYV7 579 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 CETN3O15182 167 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 HARSP12081 509 aaKnown RBP3.68□□□□□ -1.82
LPP-220ENST00000617246 RNF207Q6ZRF8 634 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 GPRC5AQ8NFJ5 357 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 XAGE3Q8WTP9 111 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 ARGLU1Q9NWB6 273 aaPredicted RBP3.68□□□□□ -1.82
LPP-220ENST00000617246 CCDC169A6NNP5 214 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 GH1P01241 217 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 ITGAXP20702 1163 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 RSBN1LQ6PCB5 846 aaPredicted RBP3.68□□□□□ -1.82
LPP-220ENST00000617246 MROH8Q9H579 483 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 PCDHA1Q9Y5I3 950 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 GOLGA6L7A0A1B0GV03 622 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 KIAA1755Q5JYT7 1200 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 HCN3Q9P1Z3 774 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 TMEM247A6NEH6 219 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 RHOBTB1O94844 696 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 LDHAP00338 332 aaKnown RBP3.68□□□□□ -1.82
LPP-220ENST00000617246 UBA7P41226 1012 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 PTK2BQ14289 1009 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 CEP57Q86XR8 500 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 ATP6V0A4Q9HBG4 840 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 ERVV-1B6SEH8 477 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 CRCPO75575 148 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 TMCC1O94876 653 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 PPP2R3AQ06190 1150 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 RD3Q7Z3Z2 195 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 FTHL17Q9BXU8 183 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 FEM1BQ9UK73 627 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 COL11A1P12107 1806 aaPredicted RBP3.68□□□□□ -1.82
LPP-220ENST00000617246 UBXN8O00124 270 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 UPP2O95045 317 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 GRIK4Q16099 956 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 KSR2Q6VAB6 950 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 KRT25Q7Z3Z0 450 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 SPATA2LQ8IUW3 424 aaPredicted RBP3.67□□□□□ -1.82
LPP-220ENST00000617246 SPATA5Q8NB90 893 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 C17orf102A2RUQ5 167 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 LAD1O00515 517 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 FBXO11Q86XK2 927 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 AFG1LQ8WV93 481 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 PNMA5Q96PV4 448 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 STOML1Q9UBI4 398 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 MRFAP1Q9Y605 127 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 GLI3P10071 1580 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 SCGB2A2Q13296 93 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 MAP7D1Q3KQU3 841 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 TMEM179Q6ZVK1 233 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 PPP1R12CQ9BZL4 782 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 RCAN3Q9UKA8 241 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 SBF1O95248 1867 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 ATP1A1P05023 1023 aaKnown RBP3.67□□□□□ -1.82
LPP-220ENST00000617246 IFNA8P32881 189 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 PSPC1Q8WXF1 523 aaKnown RBP3.67□□□□□ -1.82
LPP-220ENST00000617246 UBN1Q9NPG3 1134 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 FAM169AQ9Y6X4 670 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 LUC7L3O95232 432 aaKnown RBP3.67□□□□□ -1.82
LPP-220ENST00000617246 BRAFP15056 766 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 DMP1Q13316 513 aaPredicted RBP3.67□□□□□ -1.82
LPP-220ENST00000617246 MTA1Q13330 715 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 DSG4Q86SJ6 1040 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 ATCAYQ86WG3 371 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 TRIM56Q9BRZ2 755 aaKnown RBP3.67□□□□□ -1.82
LPP-220ENST00000617246 NUSAP1Q9BXS6 441 aaKnown RBP3.67□□□□□ -1.82
LPP-220ENST00000617246 FAM204AQ9H8W3 233 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 ANKRD31Q8N7Z5 1873 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 MEIS2O14770 477 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 SLC12A2P55011 1212 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 KCNB1Q14721 858 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 PPM1LQ5SGD2 360 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 STRIP1Q5VSL9 837 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 SNRNP48Q6IEG0 339 aaKnown RBP3.67□□□□□ -1.82
LPP-220ENST00000617246 CRAMP1Q96RY5 1269 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 SLC9A7Q96T83 725 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 ABCG4Q9H172 646 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 E7EVH7 732 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 DLX3O60479 287 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 CYP2C19P33261 490 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 RASSF7Q02833 373 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 ABRQ12979 859 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 CFAP157Q5JU67 520 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 CATSPER4Q7RTX7 472 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 CABP7Q86V35 215 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 ERO1BQ86YB8 467 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 MTMR9Q96QG7 549 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 COLEC11Q9BWP8 271 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 N4BP1O75113 896 aaKnown RBP3.67□□□□□ -1.82
LPP-220ENST00000617246 PPP6R2O75170 966 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 KRT15P19012 456 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 RFC2P35250 354 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 FAM182BQ5T319 152 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 ISLR2Q6UXK2 745 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 WDR63Q8IWG1 891 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 SLC38A7Q9NVC3 462 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 PAG1Q9NWQ8 432 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 STRNO43815 780 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 EPB41P11171 864 aaKnown RBP3.67□□□□□ -1.82
LPP-220ENST00000617246 BTG3Q14201 252 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms