RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 GNA14O95837 355 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 KLRC1P26715 233 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 ANXA13P27216 316 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 SMARCA1P28370 1054 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 PSEN1P49768 467 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 CDR1P51861 262 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 ERVK-9P63128 1117 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 IFI16Q16666 785 aaKnown RBP17.12■□□□□ 0.33
GPN1-212ENST00000616939 FAM83BQ5T0W9 1011 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 HEATR3Q7Z4Q2 680 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 FBXO33Q7Z6M2 555 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 GIMAP7Q8NHV1 300 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 LARP4BQ92615 738 aaKnown RBP17.12■□□□□ 0.33
GPN1-212ENST00000616939 EEF2KMTQ96G04 330 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 PNMA5Q96PV4 448 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 JPH2Q9BR39 696 aaPredicted RBP17.12■□□□□ 0.33
GPN1-212ENST00000616939 CEP83Q9Y592 693 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 COL4A3BPQ9Y5P4 624 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 CYTH3O43739 400 aa17.11■□□□□ 0.33
GPN1-212ENST00000616939 CYP2D6P10635 497 aa17.11■□□□□ 0.33
GPN1-212ENST00000616939 GNA11P29992 359 aa17.11■□□□□ 0.33
GPN1-212ENST00000616939 USP11P51784 963 aa17.11■□□□□ 0.33
GPN1-212ENST00000616939 PPP2R2AP63151 447 aa17.11■□□□□ 0.33
GPN1-212ENST00000616939 ZNF844Q08AG5 666 aa17.11■□□□□ 0.33
GPN1-212ENST00000616939 SNCBQ16143 134 aa17.11■□□□□ 0.33
GPN1-212ENST00000616939 UAP1Q16222 522 aaPredicted RBP17.11■□□□□ 0.33
GPN1-212ENST00000616939 ANKRD20A8PQ5CZ79 823 aa17.11■□□□□ 0.33
GPN1-212ENST00000616939 C6orf50Q9HD87 102 aa17.11■□□□□ 0.33
GPN1-212ENST00000616939 IL17RBQ9NRM6 502 aa17.11■□□□□ 0.33
GPN1-212ENST00000616939 DDX20Q9UHI6 824 aaKnown RBP17.11■□□□□ 0.33
GPN1-212ENST00000616939 DNAJC8O75937 253 aaPredicted RBP17.1■□□□□ 0.33
GPN1-212ENST00000616939 KIF4AO95239 1232 aa17.1■□□□□ 0.33
GPN1-212ENST00000616939 FTCDO95954 541 aa17.1■□□□□ 0.33
GPN1-212ENST00000616939 MECOMQ03112 1051 aa17.1■□□□□ 0.33
GPN1-212ENST00000616939 TMEM119Q4V9L6 283 aa17.1■□□□□ 0.33
GPN1-212ENST00000616939 ZC3H3Q8IXZ2 948 aaKnown RBP17.1■□□□□ 0.33
GPN1-212ENST00000616939 RAD54LQ92698 747 aa17.1■□□□□ 0.33
GPN1-212ENST00000616939 CENPTQ96BT3 561 aa17.1■□□□□ 0.33
GPN1-212ENST00000616939 SGSM3Q96HU1 749 aa17.1■□□□□ 0.33
GPN1-212ENST00000616939 FAM84BQ96KN1 310 aaPredicted RBP17.1■□□□□ 0.33
GPN1-212ENST00000616939 CCDC114Q96M63 670 aa17.1■□□□□ 0.33
GPN1-212ENST00000616939 hCG_1984214I3L0E3 225 aa17.1■□□□□ 0.33
GPN1-212ENST00000616939 CCNT1O60563 726 aaKnown RBP17.1■□□□□ 0.33
GPN1-212ENST00000616939 CAMTA2O94983 1202 aa17.1■□□□□ 0.33
GPN1-212ENST00000616939 ELF1P32519 619 aa17.1■□□□□ 0.33
GPN1-212ENST00000616939 MRPL12P52815 198 aaKnown RBP17.1■□□□□ 0.33
GPN1-212ENST00000616939 FKBP3Q00688 224 aaKnown RBP17.1■□□□□ 0.33
GPN1-212ENST00000616939 TFAP4Q01664 338 aa17.1■□□□□ 0.33
GPN1-212ENST00000616939 EVX2Q03828 476 aa17.1■□□□□ 0.33
GPN1-212ENST00000616939 XRCC4Q13426 336 aa17.1■□□□□ 0.33
GPN1-212ENST00000616939 RPS6KA1Q15418 735 aa17.1■□□□□ 0.33
GPN1-212ENST00000616939 PARP9Q8IXQ6 854 aa17.1■□□□□ 0.33
GPN1-212ENST00000616939 ZNF713Q8N859 430 aaPredicted RBP17.1■□□□□ 0.33
GPN1-212ENST00000616939 SEC14L1Q92503 715 aa17.1■□□□□ 0.33
GPN1-212ENST00000616939 TATDN2Q93075 761 aa17.1■□□□□ 0.33
GPN1-212ENST00000616939 HPS3Q969F9 1004 aa17.1■□□□□ 0.33
GPN1-212ENST00000616939 MTMR9Q96QG7 549 aa17.1■□□□□ 0.33
GPN1-212ENST00000616939 LSM14BQ9BX40 385 aaKnown RBP17.1■□□□□ 0.33
GPN1-212ENST00000616939 SLITRK6Q9H5Y7 841 aa17.1■□□□□ 0.33
GPN1-212ENST00000616939 CNOT10Q9H9A5 744 aaKnown RBP17.1■□□□□ 0.33
GPN1-212ENST00000616939 CD248Q9HCU0 757 aa17.1■□□□□ 0.33
GPN1-212ENST00000616939 BSDC1Q9NW68 430 aaPredicted RBP17.1■□□□□ 0.33
GPN1-212ENST00000616939 ZBTB48P10074 688 aaPredicted RBP17.09■□□□□ 0.33
GPN1-212ENST00000616939 PDIA5Q14554 519 aa17.09■□□□□ 0.33
GPN1-212ENST00000616939 LETM2Q2VYF4 491 aa17.09■□□□□ 0.33
GPN1-212ENST00000616939 C12orf60Q5U649 245 aa17.09■□□□□ 0.33
GPN1-212ENST00000616939 TMC4Q7Z404 712 aa17.09■□□□□ 0.33
GPN1-212ENST00000616939 MYOCDQ8IZQ8 938 aa17.09■□□□□ 0.33
GPN1-212ENST00000616939 CACNA2D3Q8IZS8 1091 aa17.09■□□□□ 0.33
GPN1-212ENST00000616939 FUKQ8N0W3 1084 aa17.09■□□□□ 0.33
GPN1-212ENST00000616939 KDM4CQ9H3R0 1056 aa17.09■□□□□ 0.33
GPN1-212ENST00000616939 CDK5RAP2Q96SN8 1893 aa17.08■□□□□ 0.33
GPN1-212ENST00000616939 DDX60LQ5H9U9 1706 aaKnown RBP17.08■□□□□ 0.33
GPN1-212ENST00000616939 A0A0G2JS52 829 aa17.08■□□□□ 0.33
GPN1-212ENST00000616939 TECP42680 631 aa17.08■□□□□ 0.33
GPN1-212ENST00000616939 NAPAP54920 295 aa17.08■□□□□ 0.33
GPN1-212ENST00000616939 BYSLQ13895 437 aaKnown RBP17.08■□□□□ 0.33
GPN1-212ENST00000616939 SF3B3Q15393 1217 aaKnown RBP17.08■□□□□ 0.33
GPN1-212ENST00000616939 ASIC2Q16515 512 aa17.08■□□□□ 0.33
GPN1-212ENST00000616939 TMEM266Q2M3C6 531 aa17.08■□□□□ 0.33
GPN1-212ENST00000616939 CYB5D1Q6P9G0 228 aa17.08■□□□□ 0.33
GPN1-212ENST00000616939 TRIM59Q8IWR1 403 aa17.08■□□□□ 0.33
GPN1-212ENST00000616939 RASGEF1CQ8N431 466 aa17.08■□□□□ 0.33
GPN1-212ENST00000616939 TBC1D5Q92609 795 aa17.08■□□□□ 0.33
GPN1-212ENST00000616939 SEC16BQ96JE7 1060 aa17.08■□□□□ 0.33
GPN1-212ENST00000616939 OSBPL7Q9BZF2 842 aa17.08■□□□□ 0.33
GPN1-212ENST00000616939 RAB34Q9BZG1 259 aa17.08■□□□□ 0.33
GPN1-212ENST00000616939 GANQ9H2C0 597 aa17.08■□□□□ 0.33
GPN1-212ENST00000616939 TAF1P21675 1872 aa17.08■□□□□ 0.32
GPN1-212ENST00000616939 NHSQ6T4R5 1651 aa17.08■□□□□ 0.32
GPN1-212ENST00000616939 PGRMC1O00264 195 aaKnown RBP17.07■□□□□ 0.32
GPN1-212ENST00000616939 SLC26A4O43511 780 aa17.07■□□□□ 0.32
GPN1-212ENST00000616939 SLC8A1P32418 973 aa17.07■□□□□ 0.32
GPN1-212ENST00000616939 EVA1CP58658 441 aa17.07■□□□□ 0.32
GPN1-212ENST00000616939 HLTFQ14527 1009 aaKnown RBP eCLIP17.07■□□□□ 0.32
GPN1-212ENST00000616939 NLRC4Q9NPP4 1024 aa17.07■□□□□ 0.32
GPN1-212ENST00000616939 PPANQ9NQ55 473 aaKnown RBP17.07■□□□□ 0.32
GPN1-212ENST00000616939 CCDC87Q9NVE4 849 aa17.07■□□□□ 0.32
GPN1-212ENST00000616939 SWAP70Q9UH65 585 aa17.07■□□□□ 0.32
GPN1-212ENST00000616939 BZW2Q9Y6E2 419 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms