RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 MRVI1Q9Y6F6 885 aa13.13□□□□□ -0.31
TARDBP-217ENST00000616545 DHX15O43143 795 aaKnown RBP13.12□□□□□ -0.31
TARDBP-217ENST00000616545 SNAI1O95863 264 aaPredicted RBP13.12□□□□□ -0.31
TARDBP-217ENST00000616545 KCNA2P16389 499 aa13.12□□□□□ -0.31
TARDBP-217ENST00000616545 UBA7P41226 1012 aa13.12□□□□□ -0.31
TARDBP-217ENST00000616545 JAK3P52333 1124 aa13.12□□□□□ -0.31
TARDBP-217ENST00000616545 PRKCZQ05513 592 aa13.12□□□□□ -0.31
TARDBP-217ENST00000616545 ACVR2BQ13705 512 aa13.12□□□□□ -0.31
TARDBP-217ENST00000616545 IL17AQ16552 155 aa13.12□□□□□ -0.31
TARDBP-217ENST00000616545 KRT79Q5XKE5 535 aa13.12□□□□□ -0.31
TARDBP-217ENST00000616545 SHC4Q6S5L8 630 aa13.12□□□□□ -0.31
TARDBP-217ENST00000616545 B3GNT9Q6UX72 402 aa13.12□□□□□ -0.31
TARDBP-217ENST00000616545 SEPT14Q6ZU15 432 aa13.12□□□□□ -0.31
TARDBP-217ENST00000616545 ARHGAP39Q9C0H5 1083 aa13.12□□□□□ -0.31
TARDBP-217ENST00000616545 KATNBL1Q9H079 304 aa13.12□□□□□ -0.31
TARDBP-217ENST00000616545 CCDC39Q9UFE4 941 aa13.12□□□□□ -0.31
TARDBP-217ENST00000616545 VAV3Q9UKW4 847 aa13.12□□□□□ -0.31
TARDBP-217ENST00000616545 PLXNA1Q9UIW2 1896 aa13.12□□□□□ -0.31
TARDBP-217ENST00000616545 KDM3AQ9Y4C1 1321 aa13.12□□□□□ -0.31
TARDBP-217ENST00000616545 CASP8AP2Q9UKL3 1982 aa13.11□□□□□ -0.31
TARDBP-217ENST00000616545 DKC1O60832 514 aaKnown RBP eCLIP13.11□□□□□ -0.31
TARDBP-217ENST00000616545 FAM160A1Q05DH4 1040 aa13.11□□□□□ -0.31
TARDBP-217ENST00000616545 SPIRE1Q08AE8 756 aa13.11□□□□□ -0.31
TARDBP-217ENST00000616545 SEMA3FQ13275 785 aa13.11□□□□□ -0.31
TARDBP-217ENST00000616545 EPHA7Q15375 998 aa13.11□□□□□ -0.31
TARDBP-217ENST00000616545 TAPT1Q6NXT6 567 aa13.11□□□□□ -0.31
TARDBP-217ENST00000616545 CCDC62Q6P9F0 684 aa13.11□□□□□ -0.31
TARDBP-217ENST00000616545 METTL7BQ6UX53 244 aa13.11□□□□□ -0.31
TARDBP-217ENST00000616545 EMID1Q96A84 441 aaPredicted RBP13.11□□□□□ -0.31
TARDBP-217ENST00000616545 CALML4Q96GE6 196 aa13.11□□□□□ -0.31
TARDBP-217ENST00000616545 CLIC6Q96NY7 704 aa13.11□□□□□ -0.31
TARDBP-217ENST00000616545 NT5C3AQ9H0P0 336 aa13.11□□□□□ -0.31
TARDBP-217ENST00000616545 JPH1Q9HDC5 661 aaPredicted RBP13.11□□□□□ -0.31
TARDBP-217ENST00000616545 DDX41Q9UJV9 622 aaKnown RBP13.11□□□□□ -0.31
TARDBP-217ENST00000616545 Q9Y3F1 56 aa13.11□□□□□ -0.31
TARDBP-217ENST00000616545 WDR64B1ANS9 1081 aa13.1□□□□□ -0.31
TARDBP-217ENST00000616545 TXNP10599 105 aaKnown RBP13.1□□□□□ -0.31
TARDBP-217ENST00000616545 SYKP43405 635 aa13.1□□□□□ -0.31
TARDBP-217ENST00000616545 ITGB3BPQ13352 177 aaPredicted RBP13.1□□□□□ -0.31
TARDBP-217ENST00000616545 LAMC2Q13753 1193 aa13.1□□□□□ -0.31
TARDBP-217ENST00000616545 KLHL40Q2TBA0 621 aa13.1□□□□□ -0.31
TARDBP-217ENST00000616545 HYIQ5T013 277 aa13.1□□□□□ -0.31
TARDBP-217ENST00000616545 EEPD1Q7L9B9 569 aa13.1□□□□□ -0.31
TARDBP-217ENST00000616545 FBXO16Q8IX29 292 aaPredicted RBP13.1□□□□□ -0.31
TARDBP-217ENST00000616545 ELOA2Q8IYF1 753 aaPredicted RBP13.1□□□□□ -0.31
TARDBP-217ENST00000616545 FSIP1Q8NA03 581 aa13.1□□□□□ -0.31
TARDBP-217ENST00000616545 SLAIN1Q8ND83 568 aa13.1□□□□□ -0.31
TARDBP-217ENST00000616545 RAET1EQ8TD07 263 aa13.1□□□□□ -0.31
TARDBP-217ENST00000616545 SYMPKQ92797 1274 aaKnown RBP13.1□□□□□ -0.31
TARDBP-217ENST00000616545 SYAP1Q96A49 352 aaPredicted RBP13.1□□□□□ -0.31
TARDBP-217ENST00000616545 TIGD1Q96MW7 591 aa13.1□□□□□ -0.31
TARDBP-217ENST00000616545 POLR3CQ9BUI4 534 aaPredicted RBP13.1□□□□□ -0.31
TARDBP-217ENST00000616545 CUEDC2Q9H467 287 aa13.1□□□□□ -0.31
TARDBP-217ENST00000616545 TUFT1Q9NNX1 390 aa13.1□□□□□ -0.31
TARDBP-217ENST00000616545 SLC9A2Q9UBY0 812 aa13.1□□□□□ -0.31
TARDBP-217ENST00000616545 KCNH3Q9ULD8 1083 aa13.1□□□□□ -0.31
TARDBP-217ENST00000616545 GABRQQ9UN88 632 aa13.1□□□□□ -0.31
TARDBP-217ENST00000616545 HPSEQ9Y251 543 aa13.1□□□□□ -0.31
TARDBP-217ENST00000616545 DDX49Q9Y6V7 483 aaKnown RBP13.1□□□□□ -0.31
TARDBP-217ENST00000616545 LRRC37A2A6NM11 1700 aa13.09□□□□□ -0.31
TARDBP-217ENST00000616545 ADCY3O60266 1144 aa13.09□□□□□ -0.31
TARDBP-217ENST00000616545 ATP9AO75110 1047 aa13.09□□□□□ -0.31
TARDBP-217ENST00000616545 GADD45BO75293 160 aaPredicted RBP13.09□□□□□ -0.31
TARDBP-217ENST00000616545 GH1P01241 217 aa13.09□□□□□ -0.31
TARDBP-217ENST00000616545 HMGCRP04035 888 aa13.09□□□□□ -0.31
TARDBP-217ENST00000616545 PFKFB1P16118 471 aa13.09□□□□□ -0.31
TARDBP-217ENST00000616545 UBA1P22314 1058 aaKnown RBP13.09□□□□□ -0.31
TARDBP-217ENST00000616545 RPA1P27694 616 aa13.09□□□□□ -0.31
TARDBP-217ENST00000616545 GRIN1Q05586 938 aa13.09□□□□□ -0.31
TARDBP-217ENST00000616545 DUSP28Q4G0W2 176 aa13.09□□□□□ -0.31
TARDBP-217ENST00000616545 CELF3Q5SZQ8 465 aaKnown RBP13.09□□□□□ -0.31
TARDBP-217ENST00000616545 KANK3Q6NY19 840 aa13.09□□□□□ -0.31
TARDBP-217ENST00000616545 MIER3Q7Z3K6 550 aa13.09□□□□□ -0.31
TARDBP-217ENST00000616545 CABP7Q86V35 215 aa13.09□□□□□ -0.31
TARDBP-217ENST00000616545 DHX37Q8IY37 1157 aaKnown RBP13.09□□□□□ -0.31
TARDBP-217ENST00000616545 DOCK3Q8IZD9 2030 aa13.09□□□□□ -0.31
TARDBP-217ENST00000616545 IQUBQ8NA54 791 aa13.09□□□□□ -0.31
TARDBP-217ENST00000616545 ZFP91Q96JP5 570 aaPredicted RBP13.09□□□□□ -0.31
TARDBP-217ENST00000616545 UNC45AQ9H3U1 944 aa13.09□□□□□ -0.31
TARDBP-217ENST00000616545 MLXIPQ9HAP2 919 aa13.09□□□□□ -0.31
TARDBP-217ENST00000616545 MAGEF1Q9HAY2 307 aa13.09□□□□□ -0.31
TARDBP-217ENST00000616545 DDX19AQ9NUU7 478 aaKnown RBP13.09□□□□□ -0.31
TARDBP-217ENST00000616545 FLRT1Q9NZU1 646 aa13.09□□□□□ -0.31
TARDBP-217ENST00000616545 STK17AQ9UEE5 414 aa13.09□□□□□ -0.31
TARDBP-217ENST00000616545 HOOK1Q9UJC3 728 aaKnown RBP13.09□□□□□ -0.31
TARDBP-217ENST00000616545 FAM184BQ9ULE4 1060 aa13.09□□□□□ -0.31
TARDBP-217ENST00000616545 PCDHA10Q9Y5I2 948 aa13.09□□□□□ -0.31
TARDBP-217ENST00000616545 KIAA1217Q5T5P2 1943 aa13.08□□□□□ -0.32
TARDBP-217ENST00000616545 POTEMA6NI47 508 aa13.08□□□□□ -0.32
TARDBP-217ENST00000616545 KINO60870 393 aaKnown RBP13.08□□□□□ -0.32
TARDBP-217ENST00000616545 FARP2O94887 1054 aaPredicted RBP13.08□□□□□ -0.32
TARDBP-217ENST00000616545 ATG7O95352 703 aa13.08□□□□□ -0.32
TARDBP-217ENST00000616545 P4HBP07237 508 aaKnown RBP13.08□□□□□ -0.32
TARDBP-217ENST00000616545 PSAPP07602 524 aa13.08□□□□□ -0.32
TARDBP-217ENST00000616545 ZNF865P0CJ78 1059 aaPredicted RBP13.08□□□□□ -0.32
TARDBP-217ENST00000616545 AKR1A1P14550 325 aa13.08□□□□□ -0.32
TARDBP-217ENST00000616545 CCL14Q16627 93 aa13.08□□□□□ -0.32
TARDBP-217ENST00000616545 CCDC144BQ3MJ40 725 aa13.08□□□□□ -0.32
TARDBP-217ENST00000616545 NCAPH2Q6IBW4 605 aa13.08□□□□□ -0.32
TARDBP-217ENST00000616545 MIS18BP1Q6P0N0 1132 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms