RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 GOLGA8HP0CJ92 632 aa12.26□□□□□ -0.45
COL4A1-205ENST00000615732 CYP2C9P11712 490 aa12.26□□□□□ -0.45
COL4A1-205ENST00000615732 MYOGP15173 224 aa12.26□□□□□ -0.45
COL4A1-205ENST00000615732 GNAQP50148 359 aa12.26□□□□□ -0.45
COL4A1-205ENST00000615732 ZNF445P59923 1031 aa12.26□□□□□ -0.45
COL4A1-205ENST00000615732 MRPS5P82675 430 aaKnown RBP12.26□□□□□ -0.45
COL4A1-205ENST00000615732 CEBPZQ03701 1054 aaKnown RBP12.26□□□□□ -0.45
COL4A1-205ENST00000615732 USH1GQ495M9 461 aa12.26□□□□□ -0.45
COL4A1-205ENST00000615732 DUSP28Q4G0W2 176 aa12.26□□□□□ -0.45
COL4A1-205ENST00000615732 TMTC3Q6ZXV5 915 aa12.26□□□□□ -0.45
COL4A1-205ENST00000615732 CCDC82Q8N4S0 544 aa12.26□□□□□ -0.45
COL4A1-205ENST00000615732 OR6J1Q8NGC5 347 aa12.26□□□□□ -0.45
COL4A1-205ENST00000615732 BICD2Q8TD16 824 aa12.26□□□□□ -0.45
COL4A1-205ENST00000615732 MORC4Q8TE76 937 aa12.26□□□□□ -0.45
COL4A1-205ENST00000615732 COPS5Q92905 334 aa12.26□□□□□ -0.45
COL4A1-205ENST00000615732 AIFM3Q96NN9 605 aa12.26□□□□□ -0.45
COL4A1-205ENST00000615732 UHRF1Q96T88 793 aaPredicted RBP12.26□□□□□ -0.45
COL4A1-205ENST00000615732 WDR11Q9BZH6 1224 aa12.26□□□□□ -0.45
COL4A1-205ENST00000615732 TMEM63CQ9P1W3 806 aa12.26□□□□□ -0.45
COL4A1-205ENST00000615732 ADD3Q9UEY8 706 aaKnown RBP12.26□□□□□ -0.45
COL4A1-205ENST00000615732 MYH6P13533 1939 aa12.26□□□□□ -0.45
COL4A1-205ENST00000615732 BDP1A6H8Y1 2624 aa12.26□□□□□ -0.45
COL4A1-205ENST00000615732 ZBBXA8MT70 800 aa12.25□□□□□ -0.45
COL4A1-205ENST00000615732 RBAK-RBAKDNI3L0D1 243 aa12.25□□□□□ -0.45
COL4A1-205ENST00000615732 PRPF3O43395 683 aaKnown RBP12.25□□□□□ -0.45
COL4A1-205ENST00000615732 PLEKHA8P1O95397 391 aa12.25□□□□□ -0.45
COL4A1-205ENST00000615732 CHMP4BP1P59074 171 aa12.25□□□□□ -0.45
COL4A1-205ENST00000615732 RPS6P62753 249 aaKnown RBP12.25□□□□□ -0.45
COL4A1-205ENST00000615732 PDE4DQ08499 809 aa12.25□□□□□ -0.45
COL4A1-205ENST00000615732 ZNF543Q08ER8 600 aa12.25□□□□□ -0.45
COL4A1-205ENST00000615732 TROAPQ12815 778 aa12.25□□□□□ -0.45
COL4A1-205ENST00000615732 STK38Q15208 465 aa12.25□□□□□ -0.45
COL4A1-205ENST00000615732 FAM47CQ5HY64 1035 aa12.25□□□□□ -0.45
COL4A1-205ENST00000615732 RNF207Q6ZRF8 634 aa12.25□□□□□ -0.45
COL4A1-205ENST00000615732 PNMA1Q8ND90 353 aa12.25□□□□□ -0.45
COL4A1-205ENST00000615732 ANKS1AQ92625 1134 aa12.25□□□□□ -0.45
COL4A1-205ENST00000615732 USP28Q96RU2 1077 aa12.25□□□□□ -0.45
COL4A1-205ENST00000615732 FSD2A1L4K1 749 aa12.24□□□□□ -0.45
COL4A1-205ENST00000615732 LETM1O95202 739 aaPredicted RBP12.24□□□□□ -0.45
COL4A1-205ENST00000615732 MRE11P49959 708 aa12.24□□□□□ -0.45
COL4A1-205ENST00000615732 PURAQ00577 322 aaKnown RBP12.24□□□□□ -0.45
COL4A1-205ENST00000615732 GRM4Q14833 912 aa12.24□□□□□ -0.45
COL4A1-205ENST00000615732 SF3A1Q15459 793 aaKnown RBP12.24□□□□□ -0.45
COL4A1-205ENST00000615732 MYSM1Q5VVJ2 828 aa12.24□□□□□ -0.45
COL4A1-205ENST00000615732 PPP2R2DQ66LE6 453 aa12.24□□□□□ -0.45
COL4A1-205ENST00000615732 DEFB128Q7Z7B8 93 aa12.24□□□□□ -0.45
COL4A1-205ENST00000615732 CMTR1Q8N1G2 835 aaKnown RBP12.24□□□□□ -0.45
COL4A1-205ENST00000615732 MICALL1Q8N3F8 863 aa12.24□□□□□ -0.45
COL4A1-205ENST00000615732 MAP3K14Q99558 947 aa12.24□□□□□ -0.45
COL4A1-205ENST00000615732 UBA5Q9GZZ9 404 aa12.24□□□□□ -0.45
COL4A1-205ENST00000615732 BRMS1Q9HCU9 246 aa12.24□□□□□ -0.45
COL4A1-205ENST00000615732 GJB4Q9NTQ9 266 aa12.24□□□□□ -0.45
COL4A1-205ENST00000615732 Q9Y3F1 56 aa12.24□□□□□ -0.45
COL4A1-205ENST00000615732 SCN5AQ14524 2016 aa12.23□□□□□ -0.45
COL4A1-205ENST00000615732 TANC1Q9C0D5 1861 aa12.23□□□□□ -0.45
COL4A1-205ENST00000615732 CNTNAP5Q8WYK1 1306 aa12.23□□□□□ -0.45
COL4A1-205ENST00000615732 SYCE3A1L190 88 aa12.23□□□□□ -0.45
COL4A1-205ENST00000615732 KIF28PB7ZC32 967 aa12.23□□□□□ -0.45
COL4A1-205ENST00000615732 ARIH2O95376 493 aa12.23□□□□□ -0.45
COL4A1-205ENST00000615732 YEATS4O95619 227 aa12.23□□□□□ -0.45
COL4A1-205ENST00000615732 SNHG28P0DPA3 235 aa12.23□□□□□ -0.45
COL4A1-205ENST00000615732 CPT1AP50416 773 aa12.23□□□□□ -0.45
COL4A1-205ENST00000615732 TTLL4Q14679 1199 aa12.23□□□□□ -0.45
COL4A1-205ENST00000615732 CDC37Q16543 378 aaPredicted RBP12.23□□□□□ -0.45
COL4A1-205ENST00000615732 KCNG4Q8TDN1 519 aa12.23□□□□□ -0.45
COL4A1-205ENST00000615732 NECAB3Q96P71 396 aaPredicted RBP12.23□□□□□ -0.45
COL4A1-205ENST00000615732 SEZ6LQ9BYH1 1024 aa12.23□□□□□ -0.45
COL4A1-205ENST00000615732 GRPEL1Q9HAV7 217 aa12.23□□□□□ -0.45
COL4A1-205ENST00000615732 POLR3EQ9NVU0 708 aa12.23□□□□□ -0.45
COL4A1-205ENST00000615732 RTEL1Q9NZ71 1219 aa12.23□□□□□ -0.45
COL4A1-205ENST00000615732 RCOR1Q9UKL0 485 aa12.23□□□□□ -0.45
COL4A1-205ENST00000615732 PCDHA11Q9Y5I1 949 aa12.23□□□□□ -0.45
COL4A1-205ENST00000615732 SLC4A7Q9Y6M7 1214 aa12.23□□□□□ -0.45
COL4A1-205ENST00000615732 MYO9BQ13459 2157 aa12.23□□□□□ -0.45
COL4A1-205ENST00000615732 RBM47A0AV96 593 aaKnown RBP12.22□□□□□ -0.45
COL4A1-205ENST00000615732 MMP1P03956 469 aa12.22□□□□□ -0.45
COL4A1-205ENST00000615732 ATP2A2P16615 1042 aaKnown RBP12.22□□□□□ -0.45
COL4A1-205ENST00000615732 EDNRBP24530 442 aa12.22□□□□□ -0.45
COL4A1-205ENST00000615732 ME1P48163 572 aa12.22□□□□□ -0.45
COL4A1-205ENST00000615732 TFF2Q03403 129 aa12.22□□□□□ -0.45
COL4A1-205ENST00000615732 NBPF20Q3BBV1 942 aa12.22□□□□□ -0.45
COL4A1-205ENST00000615732 LRSAM1Q6UWE0 723 aa12.22□□□□□ -0.45
COL4A1-205ENST00000615732 CCDC73Q6ZRK6 1079 aa12.22□□□□□ -0.45
COL4A1-205ENST00000615732 DIS3L2Q8IYB7 885 aaKnown RBP12.22□□□□□ -0.45
COL4A1-205ENST00000615732 SCFD2Q8WU76 684 aa12.22□□□□□ -0.45
COL4A1-205ENST00000615732 LZTS2Q9BRK4 669 aa12.22□□□□□ -0.45
COL4A1-205ENST00000615732 MTG1Q9BT17 334 aaPredicted RBP12.22□□□□□ -0.45
COL4A1-205ENST00000615732 DDX19AQ9NUU7 478 aaKnown RBP12.22□□□□□ -0.45
COL4A1-205ENST00000615732 KCNJ14Q9UNX9 436 aa12.22□□□□□ -0.45
COL4A1-205ENST00000615732 V9GY48 417 aaPredicted RBP12.22□□□□□ -0.45
COL4A1-205ENST00000615732 RFXAPO00287 272 aa12.21□□□□□ -0.45
COL4A1-205ENST00000615732 CA3P07451 260 aa12.21□□□□□ -0.45
COL4A1-205ENST00000615732 PARP1P09874 1014 aaKnown RBP12.21□□□□□ -0.45
COL4A1-205ENST00000615732 KRT2P35908 639 aa12.21□□□□□ -0.45
COL4A1-205ENST00000615732 FUT2Q10981 343 aa12.21□□□□□ -0.45
COL4A1-205ENST00000615732 RPUSD2Q8IZ73 545 aaKnown RBP12.21□□□□□ -0.45
COL4A1-205ENST00000615732 SRBD1Q8N5C6 995 aaKnown RBP12.21□□□□□ -0.45
COL4A1-205ENST00000615732 TBC1D5Q92609 795 aa12.21□□□□□ -0.45
COL4A1-205ENST00000615732 FTOQ9C0B1 505 aaKnown RBP eCLIP12.21□□□□□ -0.45
COL4A1-205ENST00000615732 NUP62CLQ9H1M0 184 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms