RNA–Protein interactions for RNA: ENST00000615096.4

SCUBE1-208, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 2 BASIC

Gene SCUBE1, Length 1,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-208ENST00000615096 SGPL1O95470 568 aa25.12■■□□□ 1.61
SCUBE1-208ENST00000615096 PGK1P00558 417 aa25.12■■□□□ 1.61
SCUBE1-208ENST00000615096 IRX5P78411 483 aaPredicted RBP25.12■■□□□ 1.61
SCUBE1-208ENST00000615096 LAMC2Q13753 1193 aa25.12■■□□□ 1.61
SCUBE1-208ENST00000615096 METTL7BQ6UX53 244 aa25.12■■□□□ 1.61
SCUBE1-208ENST00000615096 CYFIP1Q7L576 1253 aa25.12■■□□□ 1.61
SCUBE1-208ENST00000615096 OR6J1Q8NGC5 347 aa25.12■■□□□ 1.61
SCUBE1-208ENST00000615096 U2AF1L4Q8WU68 220 aaKnown RBP25.12■■□□□ 1.61
SCUBE1-208ENST00000615096 HAS1Q92839 578 aa25.12■■□□□ 1.61
SCUBE1-208ENST00000615096 TMEM106CQ9BVX2 250 aa25.12■■□□□ 1.61
SCUBE1-208ENST00000615096 AP5M1Q9H0R1 490 aa25.12■■□□□ 1.61
SCUBE1-208ENST00000615096 TMEM60Q9H2L4 133 aa25.12■■□□□ 1.61
SCUBE1-208ENST00000615096 OGDHLQ9ULD0 1010 aa25.12■■□□□ 1.61
SCUBE1-208ENST00000615096 SORBS3O60504 671 aa25.11■■□□□ 1.61
SCUBE1-208ENST00000615096 GJA8P48165 433 aa25.11■■□□□ 1.61
SCUBE1-208ENST00000615096 NUCB2P80303 420 aa25.11■■□□□ 1.61
SCUBE1-208ENST00000615096 TNS4Q8IZW8 715 aa25.11■■□□□ 1.61
SCUBE1-208ENST00000615096 C4orf32Q8N8J7 132 aa25.11■■□□□ 1.61
SCUBE1-208ENST00000615096 GJA10Q969M2 543 aa25.11■■□□□ 1.61
SCUBE1-208ENST00000615096 FAM20AQ96MK3 541 aa25.11■■□□□ 1.61
SCUBE1-208ENST00000615096 MTMR9Q96QG7 549 aa25.11■■□□□ 1.61
SCUBE1-208ENST00000615096 RIT2Q99578 217 aa25.11■■□□□ 1.61
SCUBE1-208ENST00000615096 MLXIPQ9HAP2 919 aa25.11■■□□□ 1.61
SCUBE1-208ENST00000615096 TBC1D22BQ9NU19 505 aa25.11■■□□□ 1.61
SCUBE1-208ENST00000615096 FRMPD3Q5JV73 1810 aa25.11■■□□□ 1.61
SCUBE1-208ENST00000615096 MYADML2A6NDP7 307 aa25.1■■□□□ 1.61
SCUBE1-208ENST00000615096 PSMD10O75832 226 aa25.1■■□□□ 1.61
SCUBE1-208ENST00000615096 CALCRLQ16602 461 aa25.1■■□□□ 1.61
SCUBE1-208ENST00000615096 KLHDC9Q8NEP7 349 aa25.1■■□□□ 1.61
SCUBE1-208ENST00000615096 SDF4Q9BRK5 362 aa25.1■■□□□ 1.61
SCUBE1-208ENST00000615096 CIZ1Q9ULV3 898 aaPredicted RBP25.1■■□□□ 1.61
SCUBE1-208ENST00000615096 TELO2Q9Y4R8 837 aa25.1■■□□□ 1.61
SCUBE1-208ENST00000615096 A6NJR5 290 aa25.09■■□□□ 1.61
SCUBE1-208ENST00000615096 C6orf222P0C671 652 aaPredicted RBP25.09■■□□□ 1.61
SCUBE1-208ENST00000615096 CST5P28325 142 aaPredicted RBP25.09■■□□□ 1.61
SCUBE1-208ENST00000615096 HSDL1Q3SXM5 330 aa25.09■■□□□ 1.61
SCUBE1-208ENST00000615096 PPTC7Q8NI37 304 aa25.09■■□□□ 1.61
SCUBE1-208ENST00000615096 AFG1LQ8WV93 481 aa25.09■■□□□ 1.61
SCUBE1-208ENST00000615096 SPATA33Q96N06 139 aa25.09■■□□□ 1.61
SCUBE1-208ENST00000615096 SPC25Q9HBM1 224 aa25.09■■□□□ 1.61
SCUBE1-208ENST00000615096 SLC9A2Q9UBY0 812 aa25.09■■□□□ 1.61
SCUBE1-208ENST00000615096 CENPFP49454 3210 aa25.09■■□□□ 1.61
SCUBE1-208ENST00000615096 BAG4O95429 457 aaKnown RBP25.08■■□□□ 1.61
SCUBE1-208ENST00000615096 PTGDRQ13258 359 aa25.08■■□□□ 1.61
SCUBE1-208ENST00000615096 LRRC41Q15345 812 aa25.08■■□□□ 1.61
SCUBE1-208ENST00000615096 LRCH2Q5VUJ6 765 aa25.08■■□□□ 1.61
SCUBE1-208ENST00000615096 CCSAPQ6IQ19 270 aaPredicted RBP25.08■■□□□ 1.61
SCUBE1-208ENST00000615096 SLFN12Q8IYM2 578 aa25.08■■□□□ 1.61
SCUBE1-208ENST00000615096 JPH1Q9HDC5 661 aaPredicted RBP25.08■■□□□ 1.61
SCUBE1-208ENST00000615096 DDX39AO00148 427 aaKnown RBP25.07■■□□□ 1.6
SCUBE1-208ENST00000615096 GAS7O60861 476 aa25.07■■□□□ 1.6
SCUBE1-208ENST00000615096 CCNE2O96020 404 aa25.07■■□□□ 1.6
SCUBE1-208ENST00000615096 TFRCP02786 760 aaKnown RBP25.07■■□□□ 1.6
SCUBE1-208ENST00000615096 OR52Z1P0C646 297 aa25.07■■□□□ 1.6
SCUBE1-208ENST00000615096 BEX3Q00994 111 aa25.07■■□□□ 1.6
SCUBE1-208ENST00000615096 FSCN1Q16658 493 aaKnown RBP25.07■■□□□ 1.6
SCUBE1-208ENST00000615096 B3GNT9Q6UX72 402 aa25.07■■□□□ 1.6
SCUBE1-208ENST00000615096 RNF180Q86T96 592 aa25.07■■□□□ 1.6
SCUBE1-208ENST00000615096 ARRDC4Q8NCT1 418 aa25.07■■□□□ 1.6
SCUBE1-208ENST00000615096 USP28Q96RU2 1077 aa25.07■■□□□ 1.6
SCUBE1-208ENST00000615096 GPR20Q99678 358 aa25.07■■□□□ 1.6
SCUBE1-208ENST00000615096 TEKT3Q9BXF9 490 aa25.07■■□□□ 1.6
SCUBE1-208ENST00000615096 FTOQ9C0B1 505 aaKnown RBP eCLIP25.07■■□□□ 1.6
SCUBE1-208ENST00000615096 CLIC4Q9Y696 253 aa25.07■■□□□ 1.6
SCUBE1-208ENST00000615096 LAD1O00515 517 aa25.06■■□□□ 1.6
SCUBE1-208ENST00000615096 MMP3P08254 477 aa25.06■■□□□ 1.6
SCUBE1-208ENST00000615096 HOXD8P13378 290 aaPredicted RBP25.06■■□□□ 1.6
SCUBE1-208ENST00000615096 CAPN2P17655 700 aa25.06■■□□□ 1.6
SCUBE1-208ENST00000615096 CPT1AP50416 773 aa25.06■■□□□ 1.6
SCUBE1-208ENST00000615096 ATP2C1P98194 919 aaPredicted RBP25.06■■□□□ 1.6
SCUBE1-208ENST00000615096 SF3A1Q15459 793 aaKnown RBP25.06■■□□□ 1.6
SCUBE1-208ENST00000615096 GNASQ5JWF2 1037 aa25.06■■□□□ 1.6
SCUBE1-208ENST00000615096 VAV3Q9UKW4 847 aa25.06■■□□□ 1.6
SCUBE1-208ENST00000615096 DOCK5Q9H7D0 1870 aa25.06■■□□□ 1.6
SCUBE1-208ENST00000615096 GSTTP1A0A1W2PQM5 241 aa25.05■■□□□ 1.6
SCUBE1-208ENST00000615096 MARCH6O60337 910 aa25.05■■□□□ 1.6
SCUBE1-208ENST00000615096 TXKP42681 527 aa25.05■■□□□ 1.6
SCUBE1-208ENST00000615096 KRT76Q01546 638 aa25.05■■□□□ 1.6
SCUBE1-208ENST00000615096 SP4Q02446 784 aa25.05■■□□□ 1.6
SCUBE1-208ENST00000615096 PTPAQ15257 358 aa25.05■■□□□ 1.6
SCUBE1-208ENST00000615096 ZNF746Q6NUN9 644 aaPredicted RBP25.05■■□□□ 1.6
SCUBE1-208ENST00000615096 ZNF396Q96N95 335 aaPredicted RBP25.05■■□□□ 1.6
SCUBE1-208ENST00000615096 UNC45AQ9H3U1 944 aa25.05■■□□□ 1.6
SCUBE1-208ENST00000615096 PCDHA12Q9UN75 941 aa25.05■■□□□ 1.6
SCUBE1-208ENST00000615096 NOP56O00567 594 aaKnown RBP25.04■■□□□ 1.6
SCUBE1-208ENST00000615096 ATG7O95352 703 aa25.04■■□□□ 1.6
SCUBE1-208ENST00000615096 BMP15O95972 392 aa25.04■■□□□ 1.6
SCUBE1-208ENST00000615096 PRPHP41219 470 aa25.04■■□□□ 1.6
SCUBE1-208ENST00000615096 MNX1P50219 401 aaPredicted RBP25.04■■□□□ 1.6
SCUBE1-208ENST00000615096 ACTR2P61160 394 aa25.04■■□□□ 1.6
SCUBE1-208ENST00000615096 SPIRE1Q08AE8 756 aa25.04■■□□□ 1.6
SCUBE1-208ENST00000615096 PPP2R5CQ13362 524 aa25.04■■□□□ 1.6
SCUBE1-208ENST00000615096 KCNA10Q16322 511 aa25.04■■□□□ 1.6
SCUBE1-208ENST00000615096 FOXD4L6Q3SYB3 417 aaPredicted RBP25.04■■□□□ 1.6
SCUBE1-208ENST00000615096 FOXD4L3Q6VB84 417 aaPredicted RBP25.04■■□□□ 1.6
SCUBE1-208ENST00000615096 SEPT1Q8WYJ6 367 aa25.04■■□□□ 1.6
SCUBE1-208ENST00000615096 TSEN34Q9BSV6 310 aaKnown RBP25.04■■□□□ 1.6
SCUBE1-208ENST00000615096 TTC12Q9H892 705 aaPredicted RBP25.04■■□□□ 1.6
SCUBE1-208ENST00000615096 POLR3EQ9NVU0 708 aa25.04■■□□□ 1.6
SCUBE1-208ENST00000615096 CHMP5Q9NZZ3 219 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms