RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 MTMR1Q13613 665 aa7.04□□□□□ -1.28
CBWD3-210ENST00000614398 ZNF746Q6NUN9 644 aaPredicted RBP7.04□□□□□ -1.28
CBWD3-210ENST00000614398 CCDC62Q6P9F0 684 aa7.04□□□□□ -1.28
CBWD3-210ENST00000614398 ARMCX2Q7L311 632 aa7.04□□□□□ -1.28
CBWD3-210ENST00000614398 ENGASEQ8NFI3 743 aa7.04□□□□□ -1.28
CBWD3-210ENST00000614398 NPLOC4Q8TAT6 608 aa7.04□□□□□ -1.28
CBWD3-210ENST00000614398 PXYLP1Q8TE99 480 aa7.04□□□□□ -1.28
CBWD3-210ENST00000614398 TINF2Q9BSI4 451 aa7.04□□□□□ -1.28
CBWD3-210ENST00000614398 POLR3CQ9BUI4 534 aaPredicted RBP7.04□□□□□ -1.28
CBWD3-210ENST00000614398 ABHD16BQ9H3Z7 469 aa7.04□□□□□ -1.28
CBWD3-210ENST00000614398 CUEDC2Q9H467 287 aa7.04□□□□□ -1.28
CBWD3-210ENST00000614398 KCNH7Q9NS40 1196 aa7.04□□□□□ -1.28
CBWD3-210ENST00000614398 Q9Y3F1 56 aa7.04□□□□□ -1.28
CBWD3-210ENST00000614398 KDM3AQ9Y4C1 1321 aa7.04□□□□□ -1.28
CBWD3-210ENST00000614398 FRMPD3Q5JV73 1810 aa7.04□□□□□ -1.28
CBWD3-210ENST00000614398 HOXD8P13378 290 aaPredicted RBP7.04□□□□□ -1.28
CBWD3-210ENST00000614398 PSMC4P43686 418 aa7.04□□□□□ -1.28
CBWD3-210ENST00000614398 ME1P48163 572 aa7.04□□□□□ -1.28
CBWD3-210ENST00000614398 JAK3P52333 1124 aa7.04□□□□□ -1.28
CBWD3-210ENST00000614398 KLHL40Q2TBA0 621 aa7.04□□□□□ -1.28
CBWD3-210ENST00000614398 PRR16Q569H4 304 aa7.04□□□□□ -1.28
CBWD3-210ENST00000614398 SHC4Q6S5L8 630 aa7.04□□□□□ -1.28
CBWD3-210ENST00000614398 SCFD2Q8WU76 684 aa7.04□□□□□ -1.28
CBWD3-210ENST00000614398 ANP32BQ92688 251 aaKnown RBP7.04□□□□□ -1.28
CBWD3-210ENST00000614398 ZNF577Q9BSK1 485 aa7.04□□□□□ -1.28
CBWD3-210ENST00000614398 TEKT3Q9BXF9 490 aa7.04□□□□□ -1.28
CBWD3-210ENST00000614398 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.04□□□□□ -1.28
CBWD3-210ENST00000614398 SRRDQ9UH36 339 aa7.04□□□□□ -1.28
CBWD3-210ENST00000614398 MCM3APO60318 1980 aa7.04□□□□□ -1.28
CBWD3-210ENST00000614398 ARID2Q68CP9 1835 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 FSD2A1L4K1 749 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 IPO5O00410 1097 aaKnown RBP7.03□□□□□ -1.28
CBWD3-210ENST00000614398 ATG7O95352 703 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 SNAI1O95863 264 aaPredicted RBP7.03□□□□□ -1.28
CBWD3-210ENST00000614398 PGK2P07205 417 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 ARP10275 920 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 FAM160A1Q05DH4 1040 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 ITGB3BPQ13352 177 aaPredicted RBP7.03□□□□□ -1.28
CBWD3-210ENST00000614398 NEDD9Q14511 834 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 TMEM119Q4V9L6 283 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 IQSEC1Q6DN90 963 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 TAPT1Q6NXT6 567 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 CNNM4Q6P4Q7 775 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 OTOP1Q7RTM1 612 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 DPP9Q86TI2 863 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 ERMNQ8TAM6 284 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 ZFP91Q96JP5 570 aaPredicted RBP7.03□□□□□ -1.28
CBWD3-210ENST00000614398 PURBQ96QR8 312 aaKnown RBP7.03□□□□□ -1.28
CBWD3-210ENST00000614398 GTPBP4Q9BZE4 634 aaKnown RBP7.03□□□□□ -1.28
CBWD3-210ENST00000614398 TUFT1Q9NNX1 390 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 DDX19AQ9NUU7 478 aaKnown RBP7.03□□□□□ -1.28
CBWD3-210ENST00000614398 FAM13BQ9NYF5 915 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 DDX41Q9UJV9 622 aaKnown RBP7.03□□□□□ -1.28
CBWD3-210ENST00000614398 PRPF40AO75400 957 aaKnown RBP7.03□□□□□ -1.28
CBWD3-210ENST00000614398 TRPA1O75762 1119 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 TBC1D8O95759 1140 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 TXLNAP40222 546 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 EPHA7Q15375 998 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 MAP3K21Q5TCX8 1036 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 LRCH2Q5VUJ6 765 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 HAUS3Q68CZ6 603 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 FMR1NBQ8N0W7 255 aaPredicted RBP7.03□□□□□ -1.28
CBWD3-210ENST00000614398 CYP2W1Q8TAV3 490 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 CHAMP1Q96JM3 812 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 MMTAG2Q9BU76 263 aaKnown RBP7.03□□□□□ -1.28
CBWD3-210ENST00000614398 CSRNP2Q9H175 543 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 TTC12Q9H892 705 aaPredicted RBP7.03□□□□□ -1.28
CBWD3-210ENST00000614398 STK17AQ9UEE5 414 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 PCDHA12Q9UN75 941 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 PPME1Q9Y570 386 aa7.03□□□□□ -1.28
CBWD3-210ENST00000614398 IGKV6D-21A0A0A0MT36 114 aa7.02□□□□□ -1.29
CBWD3-210ENST00000614398 GAS7O60861 476 aa7.02□□□□□ -1.29
CBWD3-210ENST00000614398 MYCLP12524 364 aaPredicted RBP7.02□□□□□ -1.29
CBWD3-210ENST00000614398 XRCC6P12956 609 aaKnown RBP eCLIP7.02□□□□□ -1.29
CBWD3-210ENST00000614398 CAPN2P17655 700 aa7.02□□□□□ -1.29
CBWD3-210ENST00000614398 ATP2B1P20020 1258 aa7.02□□□□□ -1.29
CBWD3-210ENST00000614398 MARCKSP29966 332 aaPredicted RBP7.02□□□□□ -1.29
CBWD3-210ENST00000614398 TTLL4Q14679 1199 aa7.02□□□□□ -1.29
CBWD3-210ENST00000614398 E2F4Q16254 413 aa7.02□□□□□ -1.29
CBWD3-210ENST00000614398 WDR78Q5VTH9 848 aa7.02□□□□□ -1.29
CBWD3-210ENST00000614398 METTL7BQ6UX53 244 aa7.02□□□□□ -1.29
CBWD3-210ENST00000614398 CCDC73Q6ZRK6 1079 aa7.02□□□□□ -1.29
CBWD3-210ENST00000614398 SDF4Q9BRK5 362 aa7.02□□□□□ -1.29
CBWD3-210ENST00000614398 NT5C3AQ9H0P0 336 aa7.02□□□□□ -1.29
CBWD3-210ENST00000614398 DOCK3Q8IZD9 2030 aa7.02□□□□□ -1.29
CBWD3-210ENST00000614398 VWA3AA6NCI4 1184 aa7.02□□□□□ -1.29
CBWD3-210ENST00000614398 GOLGA6L4A6NEF3 574 aa7.02□□□□□ -1.29
CBWD3-210ENST00000614398 WDR64B1ANS9 1081 aa7.02□□□□□ -1.29
CBWD3-210ENST00000614398 DKC1O60832 514 aaKnown RBP eCLIP7.02□□□□□ -1.29
CBWD3-210ENST00000614398 GADD45BO75293 160 aaPredicted RBP7.02□□□□□ -1.29
CBWD3-210ENST00000614398 LGR5O75473 907 aa7.02□□□□□ -1.29
CBWD3-210ENST00000614398 MYL1P05976 194 aa7.02□□□□□ -1.29
CBWD3-210ENST00000614398 ZNF865P0CJ78 1059 aaPredicted RBP7.02□□□□□ -1.29
CBWD3-210ENST00000614398 CYBAP13498 195 aa7.02□□□□□ -1.29
CBWD3-210ENST00000614398 PFKFB1P16118 471 aa7.02□□□□□ -1.29
CBWD3-210ENST00000614398 UBA1P22314 1058 aaKnown RBP7.02□□□□□ -1.29
CBWD3-210ENST00000614398 RPA1P27694 616 aa7.02□□□□□ -1.29
CBWD3-210ENST00000614398 UBXN2AP68543 259 aa7.02□□□□□ -1.29
CBWD3-210ENST00000614398 HTRA3P83110 453 aa7.02□□□□□ -1.29
CBWD3-210ENST00000614398 CEBPZQ03701 1054 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms