RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 FRMPD2Q68DX3 1309 aaPredicted RBP12.01□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 MAGEA9P43362 315 aa12.01□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 KIAA1328Q86T90 577 aa12.01□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 LRRC47Q8N1G4 583 aaKnown RBP12.01□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 COA7Q96BR5 231 aa12.01□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 JPH2Q9BR39 696 aaPredicted RBP12.01□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 UBXN6Q9BZV1 441 aa12.01□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 PSTPIP2Q9H939 334 aa12.01□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 EFCC1Q9HA90 598 aa12.01□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 DDX25Q9UHL0 483 aaKnown RBP12.01□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 LUC7L2Q9Y383 392 aaKnown RBP12.01□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 LOXHD1Q8IVV2 1947 aa12.01□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 TTC26A0AVF1 554 aa12.01□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 TRIM49BA6NDI0 452 aa12.01□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 POTEB2H3BUK9 544 aa12.01□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 ERLIN2O94905 339 aa12.01□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 KRT9P35527 623 aa12.01□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 GGCXP38435 758 aa12.01□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 ANKRD13CQ8N6S4 541 aa12.01□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 TRIM47Q96LD4 638 aa12.01□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 EPN1Q9Y6I3 576 aaPredicted RBP12.01□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 NDUFA10O95299 355 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 MMP10P09238 476 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 AMPD2Q01433 879 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 PICALMQ13492 652 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 BRD3Q15059 726 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 WHAMMP3Q1A5X7 153 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 SYN2Q92777 582 aaPredicted RBP12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 CEP63Q96MT8 703 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 CHP1Q99653 195 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 NAPGQ99747 312 aaPredicted RBP12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 CAPN7Q9Y6W3 813 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 TDP2O95551 362 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 MUTP22033 750 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 ASIC1P78348 528 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 KRT83P78385 493 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 NFIAQ12857 509 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 CERKLQ49MI3 558 aaPredicted RBP12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 FKBP1CQ5VVH2 108 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 SND1Q7KZF4 910 aaKnown RBP eCLIP12□□□□□ -0.497e-13■□□□□ 10
SENP3-EIF4A1-201ENST00000614237 CEP57Q86XR8 500 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 MSANTD4Q8NCY6 345 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 PPM1EQ8WY54 764 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 HERC5Q9UII4 1024 aaKnown RBP12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 RAB21Q9UL25 225 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 SIK3Q9Y2K2 1263 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 REXO2Q9Y3B8 237 aaKnown RBP12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 ATP8B3O60423 1300 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 MEIS2O14770 477 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 ECE2O60344 883 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 GNA14O95837 355 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 TXKP42681 527 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 CYP27A1Q02318 531 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 C2orf54Q08AI8 447 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 LRRC55Q6ZSA7 311 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 CCDC84Q86UT8 332 aaPredicted RBP12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 EHBP1Q8NDI1 1231 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 ETNPPLQ8TBG4 499 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 CNOT6LQ96LI5 555 aaKnown RBP12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 RUFY1Q96T51 708 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 ACBD3Q9H3P7 528 aa12□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 USP17L10C9JJH3 530 aa11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 H0YIN7 160 aa11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 TBC1D12O60347 775 aa11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 EEF2P13639 858 aaKnown RBP11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 SPIRE1Q08AE8 756 aa11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 VWA3BQ502W6 1294 aa11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 PPP4R3CPQ6ZMV5 832 aa11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 SH2D3CQ8N5H7 860 aa11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 MTMR14Q8NCE2 650 aa11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 FAM20AQ96MK3 541 aa11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 ZNHIT6Q9NWK9 470 aaKnown RBP11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 SREBF1P36956 1147 aa11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 GNGT1P63211 74 aa11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 MAP3K10Q02779 954 aa11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 MAN2A1Q16706 1144 aa11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 DOK7Q18PE1 504 aa11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 TTBK2Q6IQ55 1244 aa11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 VAT1LQ9HCJ6 419 aa11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 GPCPD1Q9NPB8 672 aa11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 EHD2Q9NZN4 543 aa11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 RGS17Q9UGC6 210 aaPredicted RBP11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 L1RE1Q9UN81 338 aa11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 PLAGL2Q9UPG8 496 aa11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 DDTLA6NHG4 134 aaPredicted RBP11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 EBAG9O00559 213 aa11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 QRICH1Q2TAL8 776 aa11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 CCDC122Q5T0U0 273 aa11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 PAPD7Q5XG87 772 aaKnown RBP11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 C2CD5Q86YS7 1000 aa11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 SMCR8Q8TEV9 937 aaPredicted RBP11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 MYCBPQ99417 103 aaPredicted RBP11.99□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 GOLGA6CA6NDK9 693 aa11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 MYO1FO00160 1098 aa11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 GOLGA6DP0CG33 693 aa11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 FCER1AP12319 257 aa11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 SLC20A2Q08357 652 aa11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 PDCLQ13371 301 aa11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 TSR1Q2NL82 804 aaKnown RBP11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 SLFN13Q68D06 897 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms