RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 IQCA1Q86XH1 822 aa24.24■■□□□ 1.47
POLR2J3-220ENST00000613744 CAPZA3Q96KX2 299 aa24.24■■□□□ 1.47
POLR2J3-220ENST00000613744 JPH2Q9BR39 696 aaPredicted RBP24.24■■□□□ 1.47
POLR2J3-220ENST00000613744 ZNF341Q9BYN7 854 aa24.24■■□□□ 1.47
POLR2J3-220ENST00000613744 EPN3Q9H201 632 aa24.24■■□□□ 1.47
POLR2J3-220ENST00000613744 VCPKMTQ9H867 229 aa24.24■■□□□ 1.47
POLR2J3-220ENST00000613744 SLC12A7Q9Y666 1083 aa24.24■■□□□ 1.47
POLR2J3-220ENST00000613744 SRGAP2O75044 1071 aa24.23■■□□□ 1.47
POLR2J3-220ENST00000613744 CCDC50Q8IVM0 306 aa24.23■■□□□ 1.47
POLR2J3-220ENST00000613744 GSPT2Q8IYD1 628 aaKnown RBP24.23■■□□□ 1.47
POLR2J3-220ENST00000613744 ZSCAN10Q96SZ4 725 aaPredicted RBP24.23■■□□□ 1.47
POLR2J3-220ENST00000613744 VPS16Q9H269 839 aa24.23■■□□□ 1.47
POLR2J3-220ENST00000613744 IPO7O95373 1038 aaKnown RBP24.23■■□□□ 1.47
POLR2J3-220ENST00000613744 GH2P01242 217 aa24.23■■□□□ 1.47
POLR2J3-220ENST00000613744 RXRAP19793 462 aa24.23■■□□□ 1.47
POLR2J3-220ENST00000613744 ELF1P32519 619 aa24.23■■□□□ 1.47
POLR2J3-220ENST00000613744 AFMP43652 599 aa24.23■■□□□ 1.47
POLR2J3-220ENST00000613744 NAP1L1P55209 391 aaKnown RBP24.23■■□□□ 1.47
POLR2J3-220ENST00000613744 WTAPQ15007 396 aa24.23■■□□□ 1.47
POLR2J3-220ENST00000613744 CCDC84Q86UT8 332 aaPredicted RBP24.23■■□□□ 1.47
POLR2J3-220ENST00000613744 HOOK2Q96ED9 719 aa24.23■■□□□ 1.47
POLR2J3-220ENST00000613744 GDAP1L1Q96MZ0 367 aa24.23■■□□□ 1.47
POLR2J3-220ENST00000613744 TAB2Q9NYJ8 693 aa24.23■■□□□ 1.47
POLR2J3-220ENST00000613744 ZMYND10O75800 440 aa24.22■■□□□ 1.47
POLR2J3-220ENST00000613744 CELF2O95319 508 aaKnown RBP24.22■■□□□ 1.47
POLR2J3-220ENST00000613744 CDC25AP30304 524 aa24.22■■□□□ 1.47
POLR2J3-220ENST00000613744 SATB1Q01826 763 aa24.22■■□□□ 1.47
POLR2J3-220ENST00000613744 ACTN3Q08043 901 aaPredicted RBP24.22■■□□□ 1.47
POLR2J3-220ENST00000613744 ABCB5Q2M3G0 1257 aa24.22■■□□□ 1.47
POLR2J3-220ENST00000613744 USP49Q70CQ1 688 aa24.22■■□□□ 1.47
POLR2J3-220ENST00000613744 MAGEC3Q8TD91 643 aa24.22■■□□□ 1.47
POLR2J3-220ENST00000613744 KLRG1Q96E93 195 aa24.22■■□□□ 1.47
POLR2J3-220ENST00000613744 RMND1Q9NWS8 449 aa24.22■■□□□ 1.47
POLR2J3-220ENST00000613744 SAMM50Q9Y512 469 aa24.22■■□□□ 1.47
POLR2J3-220ENST00000613744 TRIM75PA6NK02 468 aa24.22■■□□□ 1.47
POLR2J3-220ENST00000613744 PDE2AO00408 941 aaPredicted RBP24.22■■□□□ 1.47
POLR2J3-220ENST00000613744 PPP1R12BO60237 982 aaPredicted RBP24.22■■□□□ 1.47
POLR2J3-220ENST00000613744 UBXN1Q04323 297 aa24.22■■□□□ 1.47
POLR2J3-220ENST00000613744 TTMPQ5BVD1 217 aa24.22■■□□□ 1.47
POLR2J3-220ENST00000613744 C3orf20Q8ND61 904 aa24.22■■□□□ 1.47
POLR2J3-220ENST00000613744 MTA3Q9BTC8 594 aa24.22■■□□□ 1.47
POLR2J3-220ENST00000613744 IL17RBQ9NRM6 502 aa24.22■■□□□ 1.47
POLR2J3-220ENST00000613744 A0A087X0B3 334 aa24.21■■□□□ 1.47
POLR2J3-220ENST00000613744 TTC26A0AVF1 554 aa24.21■■□□□ 1.47
POLR2J3-220ENST00000613744 MYO1FO00160 1098 aa24.21■■□□□ 1.47
POLR2J3-220ENST00000613744 CAP2P40123 477 aa24.21■■□□□ 1.47
POLR2J3-220ENST00000613744 GLE1Q53GS7 698 aaKnown RBP24.21■■□□□ 1.47
POLR2J3-220ENST00000613744 MB21D1Q8N884 522 aa24.21■■□□□ 1.47
POLR2J3-220ENST00000613744 ENAHQ8N8S7 591 aaPredicted RBP24.21■■□□□ 1.47
POLR2J3-220ENST00000613744 RETREG2Q8NC44 543 aa24.21■■□□□ 1.47
POLR2J3-220ENST00000613744 MYL10Q9BUA6 226 aa24.21■■□□□ 1.47
POLR2J3-220ENST00000613744 NUP58Q9BVL2 599 aa24.21■■□□□ 1.47
POLR2J3-220ENST00000613744 ACTR5Q9H9F9 607 aaPredicted RBP24.21■■□□□ 1.47
POLR2J3-220ENST00000613744 SNX12Q9UMY4 172 aa24.21■■□□□ 1.47
POLR2J3-220ENST00000613744 LGALS16A8MUM7 142 aa24.2■■□□□ 1.47
POLR2J3-220ENST00000613744 RASSF9O75901 435 aa24.2■■□□□ 1.47
POLR2J3-220ENST00000613744 SEPT2Q15019 361 aa24.2■■□□□ 1.47
POLR2J3-220ENST00000613744 CD302Q8IX05 232 aa24.2■■□□□ 1.47
POLR2J3-220ENST00000613744 CEP120Q8N960 986 aa24.2■■□□□ 1.47
POLR2J3-220ENST00000613744 KLC4Q9NSK0 619 aa24.2■■□□□ 1.47
POLR2J3-220ENST00000613744 UBE2Q2LH0YL09 131 aa24.2■■□□□ 1.46
POLR2J3-220ENST00000613744 TOMM70O94826 608 aa24.2■■□□□ 1.46
POLR2J3-220ENST00000613744 IDEP14735 1019 aa24.2■■□□□ 1.46
POLR2J3-220ENST00000613744 CDK17Q00537 523 aa24.2■■□□□ 1.46
POLR2J3-220ENST00000613744 C2orf54Q08AI8 447 aa24.2■■□□□ 1.46
POLR2J3-220ENST00000613744 RRAGBQ5VZM2 374 aa24.2■■□□□ 1.46
POLR2J3-220ENST00000613744 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.2■■□□□ 1.46
POLR2J3-220ENST00000613744 TRIM58Q8NG06 486 aa24.2■■□□□ 1.46
POLR2J3-220ENST00000613744 EEF1GP26641 437 aaKnown RBP24.19■■□□□ 1.46
POLR2J3-220ENST00000613744 GUCY1A2P33402 732 aa24.19■■□□□ 1.46
POLR2J3-220ENST00000613744 IFIT1BQ5T764 474 aaKnown RBP24.19■■□□□ 1.46
POLR2J3-220ENST00000613744 ZNF658Q5TYW1 1059 aaPredicted RBP24.19■■□□□ 1.46
POLR2J3-220ENST00000613744 CST9Q5W186 159 aa24.19■■□□□ 1.46
POLR2J3-220ENST00000613744 WDR59Q6PJI9 974 aa24.19■■□□□ 1.46
POLR2J3-220ENST00000613744 SMC1BQ8NDV3 1235 aa24.19■■□□□ 1.46
POLR2J3-220ENST00000613744 NEDD1Q8NHV4 660 aa24.19■■□□□ 1.46
POLR2J3-220ENST00000613744 CEP95Q96GE4 821 aa24.19■■□□□ 1.46
POLR2J3-220ENST00000613744 CCDC17Q96LX7 622 aa24.19■■□□□ 1.46
POLR2J3-220ENST00000613744 ZNHIT6Q9NWK9 470 aaKnown RBP24.19■■□□□ 1.46
POLR2J3-220ENST00000613744 GTPBP6O43824 516 aaPredicted RBP24.19■■□□□ 1.46
POLR2J3-220ENST00000613744 LSP1P33241 339 aa24.19■■□□□ 1.46
POLR2J3-220ENST00000613744 MRPL12P52815 198 aaKnown RBP24.19■■□□□ 1.46
POLR2J3-220ENST00000613744 ATP2B2Q01814 1243 aa24.19■■□□□ 1.46
POLR2J3-220ENST00000613744 PDCLQ13371 301 aa24.19■■□□□ 1.46
POLR2J3-220ENST00000613744 NAA35Q5VZE5 725 aa24.19■■□□□ 1.46
POLR2J3-220ENST00000613744 CREG2Q8IUH2 290 aa24.19■■□□□ 1.46
POLR2J3-220ENST00000613744 CABP5Q9NP86 173 aa24.19■■□□□ 1.46
POLR2J3-220ENST00000613744 ZNF112Q9UJU3 913 aa24.19■■□□□ 1.46
POLR2J3-220ENST00000613744 KCNJ14Q9UNX9 436 aa24.19■■□□□ 1.46
POLR2J3-220ENST00000613744 TCP1P17987 556 aaKnown RBP24.18■■□□□ 1.46
POLR2J3-220ENST00000613744 ERCC3P19447 782 aa24.18■■□□□ 1.46
POLR2J3-220ENST00000613744 SEMA3FQ13275 785 aa24.18■■□□□ 1.46
POLR2J3-220ENST00000613744 SEC23AQ15436 765 aa24.18■■□□□ 1.46
POLR2J3-220ENST00000613744 RTN1Q16799 776 aa24.18■■□□□ 1.46
POLR2J3-220ENST00000613744 CCDC40Q4G0X9 1142 aa24.18■■□□□ 1.46
POLR2J3-220ENST00000613744 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.18■■□□□ 1.46
POLR2J3-220ENST00000613744 NELFBQ8WX92 580 aa24.18■■□□□ 1.46
POLR2J3-220ENST00000613744 SYMPKQ92797 1274 aaKnown RBP24.18■■□□□ 1.46
POLR2J3-220ENST00000613744 ARL8AQ96BM9 186 aa24.18■■□□□ 1.46
POLR2J3-220ENST00000613744 JADE2Q9NQC1 790 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms