RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 GOLGA6L9A6NEM1 432 aa17.68■□□□□ 0.42
RTN1-209ENST00000611068 TTC36A6NLP5 189 aa17.68■□□□□ 0.42
RTN1-209ENST00000611068 GNA11P29992 359 aa17.68■□□□□ 0.42
RTN1-209ENST00000611068 PEX19P40855 299 aa17.68■□□□□ 0.42
RTN1-209ENST00000611068 ADCY7P51828 1080 aa17.68■□□□□ 0.42
RTN1-209ENST00000611068 ATP2C1P98194 919 aaPredicted RBP17.68■□□□□ 0.42
RTN1-209ENST00000611068 KIF4BQ2VIQ3 1234 aa17.68■□□□□ 0.42
RTN1-209ENST00000611068 VSTM4Q8IW00 320 aa17.68■□□□□ 0.42
RTN1-209ENST00000611068 SH3GL3Q99963 347 aa17.68■□□□□ 0.42
RTN1-209ENST00000611068 DEFB129Q9H1M3 183 aa17.68■□□□□ 0.42
RTN1-209ENST00000611068 FANCLQ9NW38 375 aa17.68■□□□□ 0.42
RTN1-209ENST00000611068 SERPINC1P01008 464 aa17.67■□□□□ 0.42
RTN1-209ENST00000611068 NAA25Q14CX7 972 aa17.67■□□□□ 0.42
RTN1-209ENST00000611068 CEP85LQ5SZL2 805 aa17.67■□□□□ 0.42
RTN1-209ENST00000611068 ANGEL2Q5VTE6 544 aaKnown RBP17.67■□□□□ 0.42
RTN1-209ENST00000611068 FAM76AQ8TAV0 307 aa17.67■□□□□ 0.42
RTN1-209ENST00000611068 MICAL1Q8TDZ2 1067 aa17.67■□□□□ 0.42
RTN1-209ENST00000611068 BPIFA3Q9BQP9 254 aa17.67■□□□□ 0.42
RTN1-209ENST00000611068 GBP3Q9H0R5 595 aa17.67■□□□□ 0.42
RTN1-209ENST00000611068 SPATS2LQ9NUQ6 558 aaKnown RBP17.67■□□□□ 0.42
RTN1-209ENST00000611068 PSME4Q14997 1843 aa17.67■□□□□ 0.42
RTN1-209ENST00000611068 EIF3HO15372 352 aaKnown RBP eCLIP17.67■□□□□ 0.42
RTN1-209ENST00000611068 BMP3P12645 472 aa17.67■□□□□ 0.42
RTN1-209ENST00000611068 ADKP55263 362 aaKnown RBP17.67■□□□□ 0.42
RTN1-209ENST00000611068 NONOQ15233 471 aaKnown RBP eCLIP17.67■□□□□ 0.42
RTN1-209ENST00000611068 FBXO28Q9NVF7 368 aa17.67■□□□□ 0.42
RTN1-209ENST00000611068 PCDHA5Q9Y5H7 936 aa17.67■□□□□ 0.42
RTN1-209ENST00000611068 DDNO94850 711 aaPredicted RBP17.66■□□□□ 0.42
RTN1-209ENST00000611068 CAP2P40123 477 aa17.66■□□□□ 0.42
RTN1-209ENST00000611068 GNGT1P63211 74 aa17.66■□□□□ 0.42
RTN1-209ENST00000611068 CCDC174Q6PII3 467 aa17.66■□□□□ 0.42
RTN1-209ENST00000611068 C4orf32Q8N8J7 132 aa17.66■□□□□ 0.42
RTN1-209ENST00000611068 MTMR14Q8NCE2 650 aa17.66■□□□□ 0.42
RTN1-209ENST00000611068 ZBTB10Q96DT7 871 aa17.66■□□□□ 0.42
RTN1-209ENST00000611068 A0A1B0GUA9 196 aa17.66■□□□□ 0.42
RTN1-209ENST00000611068 ZNF280AP59817 542 aaPredicted RBP17.66■□□□□ 0.42
RTN1-209ENST00000611068 TEPSINQ96N21 525 aa17.66■□□□□ 0.42
RTN1-209ENST00000611068 CAPS2Q9BXY5 557 aa17.66■□□□□ 0.42
RTN1-209ENST00000611068 PSTPIP2Q9H939 334 aa17.66■□□□□ 0.42
RTN1-209ENST00000611068 CPSF2Q9P2I0 782 aaKnown RBP17.66■□□□□ 0.42
RTN1-209ENST00000611068 PGAP2Q9UHJ9 254 aa17.66■□□□□ 0.42
RTN1-209ENST00000611068 TMCO5BA8MYB1 307 aa17.65■□□□□ 0.42
RTN1-209ENST00000611068 AGPSO00116 658 aa17.65■□□□□ 0.42
RTN1-209ENST00000611068 TDP2O95551 362 aa17.65■□□□□ 0.42
RTN1-209ENST00000611068 HSP90AA4PQ58FG1 418 aa17.65■□□□□ 0.42
RTN1-209ENST00000611068 ZNF513Q8N8E2 541 aaPredicted RBP17.65■□□□□ 0.42
RTN1-209ENST00000611068 VIPAS39Q9H9C1 493 aa17.65■□□□□ 0.42
RTN1-209ENST00000611068 RPSAP08865 295 aaKnown RBP17.65■□□□□ 0.42
RTN1-209ENST00000611068 TLDC1Q6P9B6 456 aa17.65■□□□□ 0.42
RTN1-209ENST00000611068 FAM83AQ86UY5 434 aa17.65■□□□□ 0.42
RTN1-209ENST00000611068 FAM228AQ86W67 206 aa17.65■□□□□ 0.42
RTN1-209ENST00000611068 DAGLBQ8NCG7 672 aa17.65■□□□□ 0.42
RTN1-209ENST00000611068 RASSF8Q8NHQ8 419 aa17.65■□□□□ 0.42
RTN1-209ENST00000611068 DCAF4Q8WV16 495 aa17.65■□□□□ 0.42
RTN1-209ENST00000611068 ZNF341Q9BYN7 854 aa17.65■□□□□ 0.42
RTN1-209ENST00000611068 BLZF1Q9H2G9 400 aa17.65■□□□□ 0.42
RTN1-209ENST00000611068 ARHGEF10LQ9HCE6 1279 aa17.65■□□□□ 0.42
RTN1-209ENST00000611068 INTS13Q9NVM9 706 aa17.65■□□□□ 0.42
RTN1-209ENST00000611068 GOLGA6CA6NDK9 693 aa17.64■□□□□ 0.41
RTN1-209ENST00000611068 MEFVO15553 781 aaPredicted RBP17.64■□□□□ 0.41
RTN1-209ENST00000611068 KIAA0754O94854 1291 aa17.64■□□□□ 0.41
RTN1-209ENST00000611068 GOLGA6DP0CG33 693 aa17.64■□□□□ 0.41
RTN1-209ENST00000611068 SMARCA1P28370 1054 aa17.64■□□□□ 0.41
RTN1-209ENST00000611068 HOXA13P31271 388 aaPredicted RBP17.64■□□□□ 0.41
RTN1-209ENST00000611068 E2F5Q15329 346 aa17.64■□□□□ 0.41
RTN1-209ENST00000611068 GOLGA6AQ9NYA3 693 aa17.64■□□□□ 0.41
RTN1-209ENST00000611068 H7C1D1 291 aa17.64■□□□□ 0.41
RTN1-209ENST00000611068 PPP1R12BO60237 982 aaPredicted RBP17.64■□□□□ 0.41
RTN1-209ENST00000611068 RASSF9O75901 435 aa17.64■□□□□ 0.41
RTN1-209ENST00000611068 TECP42680 631 aa17.64■□□□□ 0.41
RTN1-209ENST00000611068 TXKP42681 527 aa17.64■□□□□ 0.41
RTN1-209ENST00000611068 SYDE2Q5VT97 1194 aa17.64■□□□□ 0.41
RTN1-209ENST00000611068 NEK8Q86SG6 692 aa17.64■□□□□ 0.41
RTN1-209ENST00000611068 ACTN4O43707 911 aaKnown RBP17.63■□□□□ 0.41
RTN1-209ENST00000611068 SLC37A4O43826 429 aa17.63■□□□□ 0.41
RTN1-209ENST00000611068 TRAPPC10P48553 1259 aa17.63■□□□□ 0.41
RTN1-209ENST00000611068 STIM1Q13586 685 aa17.63■□□□□ 0.41
RTN1-209ENST00000611068 KRT25Q7Z3Z0 450 aa17.63■□□□□ 0.41
RTN1-209ENST00000611068 FERMT2Q96AC1 680 aa17.63■□□□□ 0.41
RTN1-209ENST00000611068 SYT17Q9BSW7 474 aa17.63■□□□□ 0.41
RTN1-209ENST00000611068 NUCKS1Q9H1E3 243 aaKnown RBP17.63■□□□□ 0.41
RTN1-209ENST00000611068 SMCHD1A6NHR9 2005 aa17.63■□□□□ 0.41
RTN1-209ENST00000611068 GREB1LQ9C091 1923 aaPredicted RBP17.63■□□□□ 0.41
RTN1-209ENST00000611068 EDIL3O43854 480 aa17.63■□□□□ 0.41
RTN1-209ENST00000611068 COBLO75128 1261 aa17.63■□□□□ 0.41
RTN1-209ENST00000611068 IPO7O95373 1038 aaKnown RBP17.63■□□□□ 0.41
RTN1-209ENST00000611068 YBX3P16989 372 aaKnown RBP eCLIP17.63■□□□□ 0.41
RTN1-209ENST00000611068 HIRAP54198 1017 aaPredicted RBP17.63■□□□□ 0.41
RTN1-209ENST00000611068 PPFIA1Q13136 1202 aa17.63■□□□□ 0.41
RTN1-209ENST00000611068 POSTNQ15063 836 aa17.63■□□□□ 0.41
RTN1-209ENST00000611068 CCDC40Q4G0X9 1142 aa17.63■□□□□ 0.41
RTN1-209ENST00000611068 GALNT17Q6IS24 598 aa17.63■□□□□ 0.41
RTN1-209ENST00000611068 DTHD1Q6ZMT9 781 aa17.63■□□□□ 0.41
RTN1-209ENST00000611068 TC2NQ8N9U0 490 aa17.63■□□□□ 0.41
RTN1-209ENST00000611068 ZNF579Q8NAF0 562 aaKnown RBP17.63■□□□□ 0.41
RTN1-209ENST00000611068 PRR12Q9ULL5 1215 aa17.63■□□□□ 0.41
RTN1-209ENST00000611068 ENO4A6NNW6 628 aa17.62■□□□□ 0.41
RTN1-209ENST00000611068 PHF20L1A8MW92 1017 aa17.62■□□□□ 0.41
RTN1-209ENST00000611068 RPS12P25398 132 aaKnown RBP17.62■□□□□ 0.41
RTN1-209ENST00000611068 PSMD2Q13200 908 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms