RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 LIFRP42702 1097 aa18.44■□□□□ 0.54
SGMS1-209ENST00000609445 CNKSR3Q6P9H4 555 aa18.44■□□□□ 0.54
SGMS1-209ENST00000609445 TRIM50Q86XT4 487 aa18.44■□□□□ 0.54
SGMS1-209ENST00000609445 TUT1Q9H6E5 874 aaKnown RBP18.44■□□□□ 0.54
SGMS1-209ENST00000609445 REV3LO60673 3130 aa18.44■□□□□ 0.54
SGMS1-209ENST00000609445 C17orf102A2RUQ5 167 aa18.43■□□□□ 0.54
SGMS1-209ENST00000609445 PIK3CDO00329 1044 aa18.43■□□□□ 0.54
SGMS1-209ENST00000609445 NOP56O00567 594 aaKnown RBP18.43■□□□□ 0.54
SGMS1-209ENST00000609445 FIBPO43427 364 aa18.43■□□□□ 0.54
SGMS1-209ENST00000609445 STAM2O75886 525 aa18.43■□□□□ 0.54
SGMS1-209ENST00000609445 SMIM10L2AP0DMW4 78 aa18.43■□□□□ 0.54
SGMS1-209ENST00000609445 SMIM10L2BP0DMW5 78 aa18.43■□□□□ 0.54
SGMS1-209ENST00000609445 SP4Q02446 784 aa18.43■□□□□ 0.54
SGMS1-209ENST00000609445 TAP1Q03518 808 aa18.43■□□□□ 0.54
SGMS1-209ENST00000609445 UBE2SQ16763 222 aa18.43■□□□□ 0.54
SGMS1-209ENST00000609445 BMP2KLQ5H9B9 411 aa18.43■□□□□ 0.54
SGMS1-209ENST00000609445 PCNX4Q63HM2 1172 aa18.43■□□□□ 0.54
SGMS1-209ENST00000609445 SERINC5Q86VE9 423 aa18.43■□□□□ 0.54
SGMS1-209ENST00000609445 GPR20Q99678 358 aa18.43■□□□□ 0.54
SGMS1-209ENST00000609445 SLC12A7Q9Y666 1083 aa18.43■□□□□ 0.54
SGMS1-209ENST00000609445 NCOR1O75376 2440 aa18.43■□□□□ 0.54
SGMS1-209ENST00000609445 MICAL3Q7RTP6 2002 aa18.42■□□□□ 0.54
SGMS1-209ENST00000609445 KAT6AQ92794 2004 aa18.42■□□□□ 0.54
SGMS1-209ENST00000609445 COL4A4P53420 1690 aaPredicted RBP18.42■□□□□ 0.54
SGMS1-209ENST00000609445 LCHNA4D1U4 455 aa18.42■□□□□ 0.54
SGMS1-209ENST00000609445 KIF28PB7ZC32 967 aa18.42■□□□□ 0.54
SGMS1-209ENST00000609445 TREHO43280 583 aa18.42■□□□□ 0.54
SGMS1-209ENST00000609445 TLL1O43897 1013 aa18.42■□□□□ 0.54
SGMS1-209ENST00000609445 PARNO95453 639 aaKnown RBP18.42■□□□□ 0.54
SGMS1-209ENST00000609445 CALM1P0DP23 149 aa18.42■□□□□ 0.54
SGMS1-209ENST00000609445 CALM2P0DP24 149 aa18.42■□□□□ 0.54
SGMS1-209ENST00000609445 CALM3P0DP25 149 aa18.42■□□□□ 0.54
SGMS1-209ENST00000609445 NEDD9Q14511 834 aa18.42■□□□□ 0.54
SGMS1-209ENST00000609445 TJAP1Q5JTD0 557 aa18.42■□□□□ 0.54
SGMS1-209ENST00000609445 UTP14CQ5TAP6 766 aaKnown RBP18.42■□□□□ 0.54
SGMS1-209ENST00000609445 KRT40Q6A162 431 aa18.42■□□□□ 0.54
SGMS1-209ENST00000609445 METTL7BQ6UX53 244 aa18.42■□□□□ 0.54
SGMS1-209ENST00000609445 TMTC3Q6ZXV5 915 aa18.42■□□□□ 0.54
SGMS1-209ENST00000609445 MICU3Q86XE3 530 aa18.42■□□□□ 0.54
SGMS1-209ENST00000609445 FANCBQ8NB91 859 aa18.42■□□□□ 0.54
SGMS1-209ENST00000609445 ARNTL2Q8WYA1 636 aa18.42■□□□□ 0.54
SGMS1-209ENST00000609445 TCEANC2Q96MN5 208 aa18.42■□□□□ 0.54
SGMS1-209ENST00000609445 RNPEPQ9H4A4 650 aa18.42■□□□□ 0.54
SGMS1-209ENST00000609445 THEGQ9P2T0 379 aa18.42■□□□□ 0.54
SGMS1-209ENST00000609445 HOXC8P31273 242 aa18.41■□□□□ 0.54
SGMS1-209ENST00000609445 THPOP40225 353 aa18.41■□□□□ 0.54
SGMS1-209ENST00000609445 XRRA1Q6P2D8 792 aa18.41■□□□□ 0.54
SGMS1-209ENST00000609445 CENPQQ7L2Z9 268 aaPredicted RBP18.41■□□□□ 0.54
SGMS1-209ENST00000609445 SGMS1Q86VZ5 419 aa18.41■□□□□ 0.54
SGMS1-209ENST00000609445 ATP6V0A1Q93050 837 aa18.41■□□□□ 0.54
SGMS1-209ENST00000609445 USP26Q9BXU7 913 aa18.41■□□□□ 0.54
SGMS1-209ENST00000609445 PSTPIP2Q9H939 334 aa18.41■□□□□ 0.54
SGMS1-209ENST00000609445 SETD4Q9NVD3 440 aa18.41■□□□□ 0.54
SGMS1-209ENST00000609445 ATP9AO75110 1047 aa18.4■□□□□ 0.54
SGMS1-209ENST00000609445 FAM117BQ6P1L5 589 aa18.4■□□□□ 0.54
SGMS1-209ENST00000609445 NLRX1Q86UT6 975 aa18.4■□□□□ 0.54
SGMS1-209ENST00000609445 SYMPKQ92797 1274 aaKnown RBP18.4■□□□□ 0.54
SGMS1-209ENST00000609445 ZBED2Q9BTP6 218 aa18.4■□□□□ 0.54
SGMS1-209ENST00000609445 OSBPL7Q9BZF2 842 aa18.4■□□□□ 0.54
SGMS1-209ENST00000609445 MTCH2Q9Y6C9 303 aa18.4■□□□□ 0.54
SGMS1-209ENST00000609445 ABHD14A-ACY1A0A1B0GW23 586 aa18.39■□□□□ 0.53
SGMS1-209ENST00000609445 RSPH10B2B2RC85 870 aa18.39■□□□□ 0.53
SGMS1-209ENST00000609445 LGR5O75473 907 aa18.39■□□□□ 0.53
SGMS1-209ENST00000609445 RSPH10BP0C881 870 aa18.39■□□□□ 0.53
SGMS1-209ENST00000609445 ITGB5P18084 799 aa18.39■□□□□ 0.53
SGMS1-209ENST00000609445 IKBKEQ14164 716 aa18.39■□□□□ 0.53
SGMS1-209ENST00000609445 ADCK5Q3MIX3 580 aa18.39■□□□□ 0.53
SGMS1-209ENST00000609445 APOA5Q6Q788 366 aa18.39■□□□□ 0.53
SGMS1-209ENST00000609445 HEATR3Q7Z4Q2 680 aa18.39■□□□□ 0.53
SGMS1-209ENST00000609445 RASEFQ8IZ41 740 aa18.39■□□□□ 0.53
SGMS1-209ENST00000609445 ATXN2LQ8WWM7 1075 aaKnown RBP18.39■□□□□ 0.53
SGMS1-209ENST00000609445 NEK1Q96PY6 1258 aa18.39■□□□□ 0.53
SGMS1-209ENST00000609445 SENP7Q9BQF6 1050 aa18.39■□□□□ 0.53
SGMS1-209ENST00000609445 PKD2L1Q9P0L9 805 aa18.39■□□□□ 0.53
SGMS1-209ENST00000609445 TCF20Q9UGU0 1960 aaKnown RBP18.39■□□□□ 0.53
SGMS1-209ENST00000609445 BRWD1Q9NSI6 2320 aa18.38■□□□□ 0.53
SGMS1-209ENST00000609445 GJB5O95377 273 aa18.38■□□□□ 0.53
SGMS1-209ENST00000609445 CTSHP09668 335 aa18.38■□□□□ 0.53
SGMS1-209ENST00000609445 KCNA2P16389 499 aa18.38■□□□□ 0.53
SGMS1-209ENST00000609445 EXOSC10Q01780 885 aaKnown RBP18.38■□□□□ 0.53
SGMS1-209ENST00000609445 RNF20Q5VTR2 975 aa18.38■□□□□ 0.53
SGMS1-209ENST00000609445 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.38■□□□□ 0.537e-7■■■□□ 17.8
SGMS1-209ENST00000609445 DBF4BQ8NFT6 615 aa18.38■□□□□ 0.53
SGMS1-209ENST00000609445 GPRASP2Q96D09 838 aa18.38■□□□□ 0.53
SGMS1-209ENST00000609445 ASB2Q96Q27 587 aa18.38■□□□□ 0.53
SGMS1-209ENST00000609445 BRPF3Q9ULD4 1205 aa18.38■□□□□ 0.53
SGMS1-209ENST00000609445 CNTNAP5Q8WYK1 1306 aa18.38■□□□□ 0.53
SGMS1-209ENST00000609445 BDP1A6H8Y1 2624 aa18.37■□□□□ 0.53
SGMS1-209ENST00000609445 GTPBP6O43824 516 aaPredicted RBP18.37■□□□□ 0.53
SGMS1-209ENST00000609445 MRPS5P82675 430 aaKnown RBP18.37■□□□□ 0.53
SGMS1-209ENST00000609445 ARHGAP4P98171 946 aa18.37■□□□□ 0.53
SGMS1-209ENST00000609445 GRB10Q13322 594 aa18.37■□□□□ 0.53
SGMS1-209ENST00000609445 WWC2Q6AWC2 1192 aa18.37■□□□□ 0.53
SGMS1-209ENST00000609445 TYW1BQ6NUM6 668 aa18.37■□□□□ 0.53
SGMS1-209ENST00000609445 SYNE3Q6ZMZ3 975 aa18.37■□□□□ 0.53
SGMS1-209ENST00000609445 LMBR1Q8WVP7 490 aa18.37■□□□□ 0.53
SGMS1-209ENST00000609445 ZNF215Q9UL58 517 aaPredicted RBP18.37■□□□□ 0.53
SGMS1-209ENST00000609445 PCDHA6Q9UN73 950 aa18.37■□□□□ 0.53
SGMS1-209ENST00000609445 PCDHA8Q9Y5H6 950 aa18.37■□□□□ 0.53
SGMS1-209ENST00000609445 UBIAD1Q9Y5Z9 338 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms