RNA–Protein interactions for RNA: ENST00000608426.1

LINC00343-211, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 709 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-211ENST00000608426 DACT3Q96B18 629 aaPredicted RBP8.62□□□□□ -1.03
LINC00343-211ENST00000608426 TOE1Q96GM8 510 aaKnown RBP8.62□□□□□ -1.03
LINC00343-211ENST00000608426 SCLYQ96I15 445 aa8.62□□□□□ -1.03
LINC00343-211ENST00000608426 FANCLQ9NW38 375 aa8.62□□□□□ -1.03
LINC00343-211ENST00000608426 CCDC66A2RUB6 948 aa8.61□□□□□ -1.03
LINC00343-211ENST00000608426 WNT9AO14904 365 aa8.61□□□□□ -1.03
LINC00343-211ENST00000608426 GSTA4O15217 222 aa8.61□□□□□ -1.03
LINC00343-211ENST00000608426 LTFP02788 710 aa8.61□□□□□ -1.03
LINC00343-211ENST00000608426 PLA2G1BP04054 148 aaKnown RBP8.61□□□□□ -1.03
LINC00343-211ENST00000608426 KRT15P19012 456 aa8.61□□□□□ -1.03
LINC00343-211ENST00000608426 NKX3-2P78367 333 aa8.61□□□□□ -1.03
LINC00343-211ENST00000608426 TUSC3Q13454 348 aa8.61□□□□□ -1.03
LINC00343-211ENST00000608426 FNDC3BQ53EP0 1204 aaKnown RBP8.61□□□□□ -1.03
LINC00343-211ENST00000608426 TCERG1LQ5VWI1 586 aa8.61□□□□□ -1.03
LINC00343-211ENST00000608426 C16orf59Q7L2K0 433 aa8.61□□□□□ -1.03
LINC00343-211ENST00000608426 NOP9Q86U38 636 aaKnown RBP8.61□□□□□ -1.03
LINC00343-211ENST00000608426 APPBP2Q92624 585 aa8.61□□□□□ -1.03
LINC00343-211ENST00000608426 CLUHP3Q96NS8 147 aa8.61□□□□□ -1.03
LINC00343-211ENST00000608426 NOX5Q96PH1 765 aa8.61□□□□□ -1.03
LINC00343-211ENST00000608426 SYT3Q9BQG1 590 aa8.61□□□□□ -1.03
LINC00343-211ENST00000608426 CD244Q9BZW8 370 aa8.61□□□□□ -1.03
LINC00343-211ENST00000608426 TRIM39Q9HCM9 518 aa8.61□□□□□ -1.03
LINC00343-211ENST00000608426 NGRNQ9NPE2 291 aaKnown RBP8.61□□□□□ -1.03
LINC00343-211ENST00000608426 KCNQ2O43526 872 aa8.6□□□□□ -1.03
LINC00343-211ENST00000608426 GPR19Q15760 415 aa8.6□□□□□ -1.03
LINC00343-211ENST00000608426 CRY1Q16526 586 aa8.6□□□□□ -1.03
LINC00343-211ENST00000608426 ARHGAP36Q6ZRI8 547 aa8.6□□□□□ -1.03
LINC00343-211ENST00000608426 FNIP1Q8TF40 1166 aa8.6□□□□□ -1.03
LINC00343-211ENST00000608426 CLEC4DQ8WXI8 215 aa8.6□□□□□ -1.03
LINC00343-211ENST00000608426 CBLCQ9ULV8 474 aa8.6□□□□□ -1.03
LINC00343-211ENST00000608426 COQ6Q9Y2Z9 468 aa8.6□□□□□ -1.03
LINC00343-211ENST00000608426 TCRBV5S4A2TA0A5A2 114 aa8.59□□□□□ -1.03
LINC00343-211ENST00000608426 TCRBV16S1A1N1A0A5B0 115 aa8.59□□□□□ -1.03
LINC00343-211ENST00000608426 ZSCAN22P10073 491 aaPredicted RBP8.59□□□□□ -1.03
LINC00343-211ENST00000608426 PDE6AP16499 860 aa8.59□□□□□ -1.03
LINC00343-211ENST00000608426 TCEA2Q15560 299 aa8.59□□□□□ -1.03
LINC00343-211ENST00000608426 VMACQ2NL98 169 aa8.59□□□□□ -1.03
LINC00343-211ENST00000608426 CR1LQ2VPA4 569 aa8.59□□□□□ -1.03
LINC00343-211ENST00000608426 EP400NLQ6ZTU2 488 aa8.59□□□□□ -1.03
LINC00343-211ENST00000608426 KCTD1Q719H9 257 aa8.59□□□□□ -1.03
LINC00343-211ENST00000608426 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.59□□□□□ -1.03
LINC00343-211ENST00000608426 OSTM1Q86WC4 334 aa8.59□□□□□ -1.03
LINC00343-211ENST00000608426 CISD2Q8N5K1 135 aaKnown RBP8.59□□□□□ -1.03
LINC00343-211ENST00000608426 ZBTB8AQ96BR9 441 aa8.59□□□□□ -1.03
LINC00343-211ENST00000608426 GORASP1Q9BQQ3 440 aa8.59□□□□□ -1.03
LINC00343-211ENST00000608426 SMAD4Q13485 552 aaKnown RBP8.58□□□□□ -1.04
LINC00343-211ENST00000608426 TEPPQ6URK8 271 aa8.58□□□□□ -1.04
LINC00343-211ENST00000608426 STK32CQ86UX6 486 aa8.58□□□□□ -1.04
LINC00343-211ENST00000608426 PTRH1Q86Y79 214 aaKnown RBP8.58□□□□□ -1.04
LINC00343-211ENST00000608426 SH3RF2Q8TEC5 729 aa8.58□□□□□ -1.04
LINC00343-211ENST00000608426 PCDH18Q9HCL0 1135 aa8.58□□□□□ -1.04
LINC00343-211ENST00000608426 SRPK3Q9UPE1 567 aa8.58□□□□□ -1.04
LINC00343-211ENST00000608426 TELO2Q9Y4R8 837 aa8.58□□□□□ -1.04
LINC00343-211ENST00000608426 OPA1O60313 960 aa8.57□□□□□ -1.04
LINC00343-211ENST00000608426 CDC45O75419 566 aa8.57□□□□□ -1.04
LINC00343-211ENST00000608426 LRG1P02750 347 aa8.57□□□□□ -1.04
LINC00343-211ENST00000608426 CKMP06732 381 aa8.57□□□□□ -1.04
LINC00343-211ENST00000608426 JAM2P57087 298 aa8.57□□□□□ -1.04
LINC00343-211ENST00000608426 HTRA3P83110 453 aa8.57□□□□□ -1.04
LINC00343-211ENST00000608426 PABPC4Q13310 644 aaKnown RBP eCLIP8.57□□□□□ -1.04
LINC00343-211ENST00000608426 C21orf62-AS1Q17RA5 79 aa8.57□□□□□ -1.04
LINC00343-211ENST00000608426 PAN2Q504Q3 1202 aaKnown RBP8.57□□□□□ -1.04
LINC00343-211ENST00000608426 C16orf86Q6ZW13 317 aa8.57□□□□□ -1.04
LINC00343-211ENST00000608426 NLGN4XQ8N0W4 816 aa8.57□□□□□ -1.04
LINC00343-211ENST00000608426 SYNPOQ8N3V7 929 aa8.57□□□□□ -1.04
LINC00343-211ENST00000608426 TTLL11Q8NHH1 800 aa8.57□□□□□ -1.04
LINC00343-211ENST00000608426 CD2APQ9Y5K6 639 aa8.57□□□□□ -1.04
LINC00343-211ENST00000608426 KCNK3O14649 394 aa8.56□□□□□ -1.04
LINC00343-211ENST00000608426 SMARCA5O60264 1052 aaPredicted RBP8.56□□□□□ -1.04
LINC00343-211ENST00000608426 AMY2AP04746 511 aa8.56□□□□□ -1.04
LINC00343-211ENST00000608426 AMY2BP19961 511 aa8.56□□□□□ -1.04
LINC00343-211ENST00000608426 LCNL1Q6ZST4 164 aa8.56□□□□□ -1.04
LINC00343-211ENST00000608426 IGSF22Q8N9C0 903 aa8.56□□□□□ -1.04
LINC00343-211ENST00000608426 C11orf84Q9BUA3 381 aaPredicted RBP8.56□□□□□ -1.04
LINC00343-211ENST00000608426 CELF4Q9BZC1 486 aaKnown RBP8.56□□□□□ -1.04
LINC00343-211ENST00000608426 ZNF561-AS1K7EIQ3 104 aa8.55□□□□□ -1.04
LINC00343-211ENST00000608426 MAN2B1O00754 1011 aa8.55□□□□□ -1.04
LINC00343-211ENST00000608426 IGSF3O75054 1194 aa8.55□□□□□ -1.04
LINC00343-211ENST00000608426 DNAJC8O75937 253 aaPredicted RBP8.55□□□□□ -1.04
LINC00343-211ENST00000608426 IGFALSP35858 605 aa8.55□□□□□ -1.04
LINC00343-211ENST00000608426 EPHA5P54756 1037 aa8.55□□□□□ -1.04
LINC00343-211ENST00000608426 ITGA1P56199 1179 aa8.55□□□□□ -1.04
LINC00343-211ENST00000608426 FZD5Q13467 585 aa8.55□□□□□ -1.04
LINC00343-211ENST00000608426 TKFCQ3LXA3 575 aa8.55□□□□□ -1.04
LINC00343-211ENST00000608426 VWA3BQ502W6 1294 aa8.55□□□□□ -1.04
LINC00343-211ENST00000608426 ABHD17CQ6PCB6 329 aa8.55□□□□□ -1.04
LINC00343-211ENST00000608426 TMC5Q6UXY8 1006 aa8.55□□□□□ -1.04
LINC00343-211ENST00000608426 ADGRG2Q8IZP9 1017 aa8.55□□□□□ -1.04
LINC00343-211ENST00000608426 TNPO3Q9Y5L0 923 aaKnown RBP8.55□□□□□ -1.04
LINC00343-211ENST00000608426 ATP23Q9Y6H3 246 aa8.55□□□□□ -1.04
LINC00343-211ENST00000608426 FFAR3O14843 346 aa8.54□□□□□ -1.04
LINC00343-211ENST00000608426 RFPL3O75679 317 aa8.54□□□□□ -1.04
LINC00343-211ENST00000608426 FAHP16930 419 aa8.54□□□□□ -1.04
LINC00343-211ENST00000608426 KCNA6P17658 529 aa8.54□□□□□ -1.04
LINC00343-211ENST00000608426 SDSP20132 328 aa8.54□□□□□ -1.04
LINC00343-211ENST00000608426 LACTBP83111 547 aaPredicted RBP8.54□□□□□ -1.04
LINC00343-211ENST00000608426 CAP1Q01518 475 aa8.54□□□□□ -1.04
LINC00343-211ENST00000608426 KRTAP19-4Q3LI73 84 aa8.54□□□□□ -1.04
LINC00343-211ENST00000608426 FIGNQ5HY92 759 aa8.54□□□□□ -1.04
LINC00343-211ENST00000608426 BTBD8Q5XKL5 378 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms