RNA–Protein interactions for RNA: ENST00000607427.1

CTSS-206, Transcript of cathepsin S, humanhuman

TSL 2

Gene CTSS, Length 390 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-206ENST00000607427 TMEM209Q96SK2 561 aa6.35□□□□□ -1.39
CTSS-206ENST00000607427 LGR4Q9BXB1 951 aa6.35□□□□□ -1.39
CTSS-206ENST00000607427 TRIM8Q9BZR9 551 aa6.35□□□□□ -1.39
CTSS-206ENST00000607427 SEC61A2Q9H9S3 476 aa6.35□□□□□ -1.39
CTSS-206ENST00000607427 ADAM29Q9UKF5 820 aa6.35□□□□□ -1.39
CTSS-206ENST00000607427 CROTQ9UKG9 612 aa6.35□□□□□ -1.39
CTSS-206ENST00000607427 ZNF652Q9Y2D9 606 aa6.35□□□□□ -1.39
CTSS-206ENST00000607427 FPR2P25090 351 aa6.34□□□□□ -1.39
CTSS-206ENST00000607427 MCM7P33993 719 aa6.34□□□□□ -1.39
CTSS-206ENST00000607427 HNRNPA0Q13151 305 aaKnown RBP6.34□□□□□ -1.39
CTSS-206ENST00000607427 KCNAB2Q13303 367 aa6.34□□□□□ -1.39
CTSS-206ENST00000607427 TESK1Q15569 626 aa6.34□□□□□ -1.39
CTSS-206ENST00000607427 TNNI3KQ59H18 835 aa6.34□□□□□ -1.39
CTSS-206ENST00000607427 TCTN3Q6NUS6 607 aa6.34□□□□□ -1.39
CTSS-206ENST00000607427 C6orf15Q6UXA7 325 aaPredicted RBP6.34□□□□□ -1.39
CTSS-206ENST00000607427 CEP68Q76N32 757 aa6.34□□□□□ -1.39
CTSS-206ENST00000607427 CCDC103Q8IW40 242 aa6.34□□□□□ -1.39
CTSS-206ENST00000607427 TOE1Q96GM8 510 aaKnown RBP6.34□□□□□ -1.39
CTSS-206ENST00000607427 GNRHR2Q96P88 292 aa6.34□□□□□ -1.39
CTSS-206ENST00000607427 ADOQ96SZ5 270 aa6.34□□□□□ -1.39
CTSS-206ENST00000607427 DTLQ9NZJ0 730 aa6.34□□□□□ -1.39
CTSS-206ENST00000607427 ZFR2Q9UPR6 939 aaKnown RBP6.34□□□□□ -1.39
CTSS-206ENST00000607427 ZDHHC9Q9Y397 364 aa6.34□□□□□ -1.39
CTSS-206ENST00000607427 UNCXA6NJT0 531 aa6.33□□□□□ -1.4
CTSS-206ENST00000607427 ARNTLO00327 626 aa6.33□□□□□ -1.4
CTSS-206ENST00000607427 SMAD7O15105 426 aaKnown RBP6.33□□□□□ -1.4
CTSS-206ENST00000607427 TBX1O43435 398 aa6.33□□□□□ -1.4
CTSS-206ENST00000607427 MYO1BO43795 1136 aa6.33□□□□□ -1.4
CTSS-206ENST00000607427 ITGAVP06756 1048 aa6.33□□□□□ -1.4
CTSS-206ENST00000607427 ACBD5Q5T8D3 534 aaPredicted RBP6.33□□□□□ -1.4
CTSS-206ENST00000607427 TRMT10BQ6PF06 316 aaKnown RBP6.33□□□□□ -1.4
CTSS-206ENST00000607427 TEPPQ6URK8 271 aa6.33□□□□□ -1.4
CTSS-206ENST00000607427 NLRP10Q86W26 655 aa6.33□□□□□ -1.4
CTSS-206ENST00000607427 ZNF227Q86WZ6 799 aa6.33□□□□□ -1.4
CTSS-206ENST00000607427 FAM178BQ8IXR5 827 aa6.33□□□□□ -1.4
CTSS-206ENST00000607427 KREMEN2Q8NCW0 462 aa6.33□□□□□ -1.4
CTSS-206ENST00000607427 TRMT2BQ96GJ1 504 aaKnown RBP6.33□□□□□ -1.4
CTSS-206ENST00000607427 ACTR10Q9NZ32 417 aa6.33□□□□□ -1.4
CTSS-206ENST00000607427 TMEFF2Q9UIK5 374 aaPredicted RBP6.33□□□□□ -1.4
CTSS-206ENST00000607427 MEFVO15553 781 aaPredicted RBP6.32□□□□□ -1.4
CTSS-206ENST00000607427 CPP00450 1065 aa6.32□□□□□ -1.4
CTSS-206ENST00000607427 SNRPB2P08579 225 aaKnown RBP6.32□□□□□ -1.4
CTSS-206ENST00000607427 COL6A1P12109 1028 aa6.32□□□□□ -1.4
CTSS-206ENST00000607427 BCL6P41182 706 aa6.32□□□□□ -1.4
CTSS-206ENST00000607427 PTH1RQ03431 593 aa6.32□□□□□ -1.4
CTSS-206ENST00000607427 SV2CQ496J9 727 aa6.32□□□□□ -1.4
CTSS-206ENST00000607427 USP39Q53GS9 565 aaKnown RBP6.32□□□□□ -1.4
CTSS-206ENST00000607427 TMEM169Q96HH4 297 aa6.32□□□□□ -1.4
CTSS-206ENST00000607427 CSRNP2Q9H175 543 aa6.32□□□□□ -1.4
CTSS-206ENST00000607427 CAPN10Q9HC96 672 aa6.32□□□□□ -1.4
CTSS-206ENST00000607427 LRP2BPQ9P2M1 347 aa6.32□□□□□ -1.4
CTSS-206ENST00000607427 TNFRSF18Q9Y5U5 241 aa6.32□□□□□ -1.4
CTSS-206ENST00000607427 SUSD5O60279 629 aa6.31□□□□□ -1.4
CTSS-206ENST00000607427 ECI1P42126 302 aa6.31□□□□□ -1.4
CTSS-206ENST00000607427 INHBCP55103 352 aa6.31□□□□□ -1.4
CTSS-206ENST00000607427 CHRNA2Q15822 529 aa6.31□□□□□ -1.4
CTSS-206ENST00000607427 LARP1BQ659C4 914 aaKnown RBP6.31□□□□□ -1.4
CTSS-206ENST00000607427 RALYLQ86SE5 291 aaKnown RBP6.31□□□□□ -1.4
CTSS-206ENST00000607427 VPS37DQ86XT2 251 aa6.31□□□□□ -1.4
CTSS-206ENST00000607427 RCBTB1Q8NDN9 531 aa6.31□□□□□ -1.4
CTSS-206ENST00000607427 EDAQ92838 391 aa6.31□□□□□ -1.4
CTSS-206ENST00000607427 COA3Q9Y2R0 106 aaPredicted RBP6.31□□□□□ -1.4
CTSS-206ENST00000607427 MRVI1Q9Y6F6 885 aa6.31□□□□□ -1.4
CTSS-206ENST00000607427 SLC4A7Q9Y6M7 1214 aa6.31□□□□□ -1.4
CTSS-206ENST00000607427 H7BY64 318 aa6.3□□□□□ -1.4
CTSS-206ENST00000607427 HGSO14964 777 aaPredicted RBP6.3□□□□□ -1.4
CTSS-206ENST00000607427 LTBRP36941 435 aa6.3□□□□□ -1.4
CTSS-206ENST00000607427 KRTAP15-1Q3LI76 137 aa6.3□□□□□ -1.4
CTSS-206ENST00000607427 ARRDC4Q8NCT1 418 aa6.3□□□□□ -1.4
CTSS-206ENST00000607427 NUDT10Q8NFP7 164 aa6.3□□□□□ -1.4
CTSS-206ENST00000607427 NUDT11Q96G61 164 aa6.3□□□□□ -1.4
CTSS-206ENST00000607427 LMF1Q96S06 567 aa6.3□□□□□ -1.4
CTSS-206ENST00000607427 PRKAG3Q9UGI9 489 aa6.3□□□□□ -1.4
CTSS-206ENST00000607427 WASF3Q9UPY6 502 aa6.3□□□□□ -1.4
CTSS-206ENST00000607427 A0A087X1B8 175 aa6.29□□□□□ -1.4
CTSS-206ENST00000607427 B2RBV5 119 aa6.29□□□□□ -1.4
CTSS-206ENST00000607427 LRG1P02750 347 aa6.29□□□□□ -1.4
CTSS-206ENST00000607427 SSBP05455 408 aaKnown RBP eCLIP6.29□□□□□ -1.4
CTSS-206ENST00000607427 GFRA1P56159 465 aa6.29□□□□□ -1.4
CTSS-206ENST00000607427 LSAMPQ13449 338 aa6.29□□□□□ -1.4
CTSS-206ENST00000607427 SF1Q15637 639 aaKnown RBP6.29□□□□□ -1.4
CTSS-206ENST00000607427 FXNQ16595 210 aa6.29□□□□□ -1.4
CTSS-206ENST00000607427 LSM12Q3MHD2 195 aaKnown RBP6.29□□□□□ -1.4
CTSS-206ENST00000607427 PPIL6Q8IXY8 311 aa6.29□□□□□ -1.4
CTSS-206ENST00000607427 EXTL1Q92935 676 aa6.29□□□□□ -1.4
CTSS-206ENST00000607427 FBXL7Q9UJT9 491 aa6.29□□□□□ -1.4
CTSS-206ENST00000607427 TCRBV5S2A0A599 114 aa6.28□□□□□ -1.4
CTSS-206ENST00000607427 TADA3O75528 432 aa6.28□□□□□ -1.4
CTSS-206ENST00000607427 DDAH1O94760 285 aa6.28□□□□□ -1.4
CTSS-206ENST00000607427 KLHL18O94889 574 aa6.28□□□□□ -1.4
CTSS-206ENST00000607427 CAPNS1P04632 268 aa6.28□□□□□ -1.4
CTSS-206ENST00000607427 KCNJ6P48051 423 aa6.28□□□□□ -1.4
CTSS-206ENST00000607427 DGCR2P98153 550 aa6.28□□□□□ -1.4
CTSS-206ENST00000607427 PRSS53Q2L4Q9 553 aa6.28□□□□□ -1.4
CTSS-206ENST00000607427 EMC4Q5J8M3 183 aa6.28□□□□□ -1.4
CTSS-206ENST00000607427 STEAP3Q658P3 488 aa6.28□□□□□ -1.4
CTSS-206ENST00000607427 MRM1Q6IN84 353 aaKnown RBP6.28□□□□□ -1.4
CTSS-206ENST00000607427 DENND5AQ6IQ26 1287 aa6.28□□□□□ -1.4
CTSS-206ENST00000607427 TMC5Q6UXY8 1006 aa6.28□□□□□ -1.4
CTSS-206ENST00000607427 Q6ZUG5 572 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms