RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 PPP1R12CQ9BZL4 782 aa18.9■□□□□ 0.62
LINC00240-203ENST00000606878 HIPK3Q9H422 1215 aa18.9■□□□□ 0.62
LINC00240-203ENST00000606878 KCNH7Q9NS40 1196 aa18.9■□□□□ 0.62
LINC00240-203ENST00000606878 NOD1Q9Y239 953 aa18.9■□□□□ 0.62
LINC00240-203ENST00000606878 MEIS1O00470 390 aa18.89■□□□□ 0.61
LINC00240-203ENST00000606878 F2P00734 622 aa18.89■□□□□ 0.61
LINC00240-203ENST00000606878 CYP3A4P08684 503 aa18.89■□□□□ 0.61
LINC00240-203ENST00000606878 ZNF286BP0CG31 522 aa18.89■□□□□ 0.61
LINC00240-203ENST00000606878 KCNA2P16389 499 aa18.89■□□□□ 0.61
LINC00240-203ENST00000606878 CYP2C18P33260 490 aa18.89■□□□□ 0.61
LINC00240-203ENST00000606878 FXR1P51114 621 aaKnown RBP eCLIP18.89■□□□□ 0.61
LINC00240-203ENST00000606878 KIAA0753Q2KHM9 967 aa18.89■□□□□ 0.61
LINC00240-203ENST00000606878 CYP2W1Q8TAV3 490 aa18.89■□□□□ 0.61
LINC00240-203ENST00000606878 PPP1R13LQ8WUF5 828 aa18.89■□□□□ 0.61
LINC00240-203ENST00000606878 GPR20Q99678 358 aa18.89■□□□□ 0.61
LINC00240-203ENST00000606878 C16orf70Q9BSU1 422 aa18.89■□□□□ 0.61
LINC00240-203ENST00000606878 H3BRB1 525 aa18.88■□□□□ 0.61
LINC00240-203ENST00000606878 HAS3O00219 553 aa18.88■□□□□ 0.61
LINC00240-203ENST00000606878 CYP2C9P11712 490 aa18.88■□□□□ 0.61
LINC00240-203ENST00000606878 XBP1P17861 261 aa18.88■□□□□ 0.61
LINC00240-203ENST00000606878 SP4Q02446 784 aa18.88■□□□□ 0.61
LINC00240-203ENST00000606878 PPIGQ13427 754 aaKnown RBP eCLIP18.88■□□□□ 0.61
LINC00240-203ENST00000606878 SHHQ15465 462 aa18.88■□□□□ 0.61
LINC00240-203ENST00000606878 PTGISQ16647 500 aa18.88■□□□□ 0.61
LINC00240-203ENST00000606878 ME3Q16798 604 aa18.88■□□□□ 0.61
LINC00240-203ENST00000606878 LRIT3Q3SXY7 679 aa18.88■□□□□ 0.61
LINC00240-203ENST00000606878 GALNT17Q6IS24 598 aa18.88■□□□□ 0.61
LINC00240-203ENST00000606878 SEPT1Q8WYJ6 367 aa18.88■□□□□ 0.61
LINC00240-203ENST00000606878 NOC4LQ9BVI4 516 aaKnown RBP18.88■□□□□ 0.61
LINC00240-203ENST00000606878 TUT1Q9H6E5 874 aaKnown RBP18.88■□□□□ 0.61
LINC00240-203ENST00000606878 UPF2Q9HAU5 1272 aaKnown RBP18.88■□□□□ 0.61
LINC00240-203ENST00000606878 PKD2L1Q9P0L9 805 aa18.88■□□□□ 0.61
LINC00240-203ENST00000606878 HDAC6Q9UBN7 1215 aa18.88■□□□□ 0.61
LINC00240-203ENST00000606878 PCDHA4Q9UN74 947 aa18.88■□□□□ 0.61
LINC00240-203ENST00000606878 RANBP2P49792 3224 aaKnown RBP18.87■□□□□ 0.61
LINC00240-203ENST00000606878 ADAMTS3O15072 1205 aa18.87■□□□□ 0.61
LINC00240-203ENST00000606878 LGALS2P05162 132 aa18.87■□□□□ 0.61
LINC00240-203ENST00000606878 ARP10275 920 aa18.87■□□□□ 0.61
LINC00240-203ENST00000606878 UTP14CQ5TAP6 766 aaKnown RBP18.87■□□□□ 0.61
LINC00240-203ENST00000606878 NIPA1Q7RTP0 329 aa18.87■□□□□ 0.61
LINC00240-203ENST00000606878 NECAB1Q8N987 351 aa18.87■□□□□ 0.61
LINC00240-203ENST00000606878 RETREG2Q8NC44 543 aa18.87■□□□□ 0.61
LINC00240-203ENST00000606878 WASF1Q92558 559 aa18.87■□□□□ 0.61
LINC00240-203ENST00000606878 SDF4Q9BRK5 362 aa18.87■□□□□ 0.61
LINC00240-203ENST00000606878 CSF2RAP15509 400 aa18.86■□□□□ 0.61
LINC00240-203ENST00000606878 CCL23P55773 120 aa18.86■□□□□ 0.61
LINC00240-203ENST00000606878 BFSP2Q13515 415 aa18.86■□□□□ 0.61
LINC00240-203ENST00000606878 GDF6Q6KF10 455 aaPredicted RBP18.86■□□□□ 0.61
LINC00240-203ENST00000606878 PLA2G4DQ86XP0 818 aa18.86■□□□□ 0.61
LINC00240-203ENST00000606878 RASGRP4Q8TDF6 673 aa18.86■□□□□ 0.61
LINC00240-203ENST00000606878 CRYGNQ8WXF5 182 aa18.86■□□□□ 0.61
LINC00240-203ENST00000606878 AIFM3Q96NN9 605 aa18.86■□□□□ 0.61
LINC00240-203ENST00000606878 AGO4Q9HCK5 861 aaKnown RBP18.86■□□□□ 0.61
LINC00240-203ENST00000606878 ORC3Q9UBD5 711 aaPredicted RBP18.86■□□□□ 0.61
LINC00240-203ENST00000606878 GTF2IRD1Q9UHL9 959 aa18.86■□□□□ 0.61
LINC00240-203ENST00000606878 LIMCH1Q9UPQ0 1083 aa18.86■□□□□ 0.61
LINC00240-203ENST00000606878 STK36Q9NRP7 1315 aa18.85■□□□□ 0.61
LINC00240-203ENST00000606878 SCN10AQ9Y5Y9 1956 aa18.85■□□□□ 0.61
LINC00240-203ENST00000606878 MYH7BA7E2Y1 1941 aa18.85■□□□□ 0.61
LINC00240-203ENST00000606878 FAM86B1E9PN63 330 aa18.85■□□□□ 0.61
LINC00240-203ENST00000606878 CTDNEP1O95476 244 aa18.85■□□□□ 0.61
LINC00240-203ENST00000606878 FAM86B2P0C5J1 330 aa18.85■□□□□ 0.61
LINC00240-203ENST00000606878 RBM25P49756 843 aaKnown RBP18.85■□□□□ 0.61
LINC00240-203ENST00000606878 USP11P51784 963 aa18.85■□□□□ 0.61
LINC00240-203ENST00000606878 EPHB4P54760 987 aa18.85■□□□□ 0.61
LINC00240-203ENST00000606878 C9orf50Q5SZB4 431 aa18.85■□□□□ 0.61
LINC00240-203ENST00000606878 RPUSD2Q8IZ73 545 aaKnown RBP18.85■□□□□ 0.61
LINC00240-203ENST00000606878 BLIDQ8IZY5 108 aa18.85■□□□□ 0.61
LINC00240-203ENST00000606878 GTF3C6Q969F1 213 aa18.85■□□□□ 0.61
LINC00240-203ENST00000606878 JPH1Q9HDC5 661 aaPredicted RBP18.85■□□□□ 0.61
LINC00240-203ENST00000606878 ZNF215Q9UL58 517 aaPredicted RBP18.85■□□□□ 0.61
LINC00240-203ENST00000606878 NFASCO94856 1347 aa18.84■□□□□ 0.61
LINC00240-203ENST00000606878 UMODL1Q5DID0 1318 aa18.84■□□□□ 0.61
LINC00240-203ENST00000606878 GSTTP1A0A1W2PQM5 241 aa18.84■□□□□ 0.61
LINC00240-203ENST00000606878 CIITAP33076 1130 aa18.84■□□□□ 0.61
LINC00240-203ENST00000606878 TCF7P36402 384 aaPredicted RBP18.84■□□□□ 0.61
LINC00240-203ENST00000606878 CCDC155Q8N6L0 562 aa18.84■□□□□ 0.61
LINC00240-203ENST00000606878 IL23AQ9NPF7 189 aa18.84■□□□□ 0.61
LINC00240-203ENST00000606878 SLC9A2Q9UBY0 812 aa18.84■□□□□ 0.61
LINC00240-203ENST00000606878 TELO2Q9Y4R8 837 aa18.84■□□□□ 0.61
LINC00240-203ENST00000606878 LARGE1O95461 756 aa18.83■□□□□ 0.6
LINC00240-203ENST00000606878 GNAT1P11488 350 aa18.83■□□□□ 0.6
LINC00240-203ENST00000606878 C16orf59Q7L2K0 433 aa18.83■□□□□ 0.6
LINC00240-203ENST00000606878 DAGLBQ8NCG7 672 aa18.83■□□□□ 0.6
LINC00240-203ENST00000606878 CAGE1Q8TC20 777 aa18.83■□□□□ 0.6
LINC00240-203ENST00000606878 GLG1Q92896 1179 aa18.83■□□□□ 0.6
LINC00240-203ENST00000606878 ZSCAN31Q96LW9 406 aaPredicted RBP18.83■□□□□ 0.6
LINC00240-203ENST00000606878 KIF2CQ99661 725 aa18.83■□□□□ 0.6
LINC00240-203ENST00000606878 SMARCAD1Q9H4L7 1026 aa18.83■□□□□ 0.6
LINC00240-203ENST00000606878 KCNJ14Q9UNX9 436 aa18.83■□□□□ 0.6
LINC00240-203ENST00000606878 IGLV3-22A0A075B6J6 115 aa18.82■□□□□ 0.6
LINC00240-203ENST00000606878 C17orf102A2RUQ5 167 aa18.82■□□□□ 0.6
LINC00240-203ENST00000606878 PITPNM1O00562 1244 aa18.82■□□□□ 0.6
LINC00240-203ENST00000606878 FGBP02675 491 aa18.82■□□□□ 0.6
LINC00240-203ENST00000606878 ACRP10323 421 aa18.82■□□□□ 0.6
LINC00240-203ENST00000606878 SETQ01105 290 aaPredicted RBP18.82■□□□□ 0.6
LINC00240-203ENST00000606878 PTK7Q13308 1070 aa18.82■□□□□ 0.6
LINC00240-203ENST00000606878 PRR16Q569H4 304 aa18.82■□□□□ 0.6
LINC00240-203ENST00000606878 ZNF365Q70YC5 407 aa18.82■□□□□ 0.6
LINC00240-203ENST00000606878 IL27Q8NEV9 243 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms